Protein–RNA interactions for Protein: A0A075B655

Trav17, T cell receptor alpha variable 17 (Fragment), mousemouse

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav17A0A075B655 Sbf1-205ENSMUST00000144585 6165 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
Trav17A0A075B655 Mtcl1-201ENSMUST00000086693 7221 ntAPPRIS P3 TSL 1 (best) BASIC14.85□□□□□ -0.03
Trav17A0A075B655 Tyw5-209ENSMUST00000162686 1847 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Trav17A0A075B655 Cyth2-202ENSMUST00000107729 2519 ntAPPRIS P2 TSL 1 (best) BASIC14.85□□□□□ -0.03
Trav17A0A075B655 Ezh2-204ENSMUST00000114618 2775 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Trav17A0A075B655 Vat1-201ENSMUST00000040430 2766 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Trav17A0A075B655 B3gnt2-202ENSMUST00000062844 3057 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Trav17A0A075B655 Apba1-201ENSMUST00000025830 6632 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Trav17A0A075B655 Foxj1-201ENSMUST00000036215 2623 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Trav17A0A075B655 Rnf44-208ENSMUST00000128257 1689 ntTSL 5 BASIC14.84□□□□□ -0.03
Trav17A0A075B655 Ppp2r1b-206ENSMUST00000175645 1931 ntAPPRIS ALT2 TSL 5 BASIC14.84□□□□□ -0.03
Trav17A0A075B655 Dtymk-202ENSMUST00000112890 1055 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Trav17A0A075B655 Stard4-203ENSMUST00000119991 941 ntTSL 5 BASIC14.84□□□□□ -0.03
Trav17A0A075B655 Epn1-202ENSMUST00000098845 2565 ntAPPRIS P2 TSL 1 (best) BASIC14.84□□□□□ -0.03
Trav17A0A075B655 Tagln-201ENSMUST00000034590 1595 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Trav17A0A075B655 Ppp1r3g-203ENSMUST00000225537 2389 ntAPPRIS P1 BASIC14.84□□□□□ -0.03
Trav17A0A075B655 Sebox-202ENSMUST00000125670 1300 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Trav17A0A075B655 Krt4-201ENSMUST00000023797 2132 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Trav17A0A075B655 H13-204ENSMUST00000125366 5204 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Trav17A0A075B655 Gm42939-201ENSMUST00000197514 2205 ntBASIC14.84□□□□□ -0.03
Trav17A0A075B655 Mgarp-202ENSMUST00000108046 1409 ntTSL 1 (best) BASIC14.83□□□□□ -0.03
Trav17A0A075B655 Rnf157-201ENSMUST00000100202 4619 ntAPPRIS P2 TSL 1 (best) BASIC14.83□□□□□ -0.03
Trav17A0A075B655 Exog-202ENSMUST00000164213 2627 ntTSL 1 (best) BASIC14.83□□□□□ -0.03
Trav17A0A075B655 Matk-205ENSMUST00000121205 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.04
Trav17A0A075B655 Tekt5-201ENSMUST00000043415 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.04
Trav17A0A075B655 Adrm1-201ENSMUST00000061437 1535 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Trav17A0A075B655 Rer1-201ENSMUST00000030914 1596 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Trav17A0A075B655 Gm15546-201ENSMUST00000122095 826 ntBASIC14.83□□□□□ -0.04
Trav17A0A075B655 Gm28417-201ENSMUST00000185218 785 ntTSL 3 BASIC14.83□□□□□ -0.04
Trav17A0A075B655 Serbp1-212ENSMUST00000204294 717 ntTSL 5 BASIC14.83□□□□□ -0.04
Trav17A0A075B655 Pmvk-201ENSMUST00000029564 1194 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Trav17A0A075B655 Igsf9b-201ENSMUST00000115247 2857 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.04
Trav17A0A075B655 Laptm4b-201ENSMUST00000022867 1902 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Trav17A0A075B655 Qpct-201ENSMUST00000040789 1924 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Trav17A0A075B655 Col15a1-202ENSMUST00000102917 5172 ntAPPRIS P2 TSL 1 (best) BASIC14.83□□□□□ -0.04
Trav17A0A075B655 Espn-203ENSMUST00000070018 1618 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Trav17A0A075B655 Ulk1-201ENSMUST00000031490 5213 ntAPPRIS P3 TSL 1 (best) BASIC14.83□□□□□ -0.04
Trav17A0A075B655 Ndufa10-201ENSMUST00000027478 2020 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Trav17A0A075B655 Cnn3-201ENSMUST00000029773 2049 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Trav17A0A075B655 Man1c1-202ENSMUST00000054096 4715 ntAPPRIS P1 TSL 5 BASIC14.83□□□□□ -0.04
Trav17A0A075B655 Larp1b-202ENSMUST00000048490 2354 ntAPPRIS P2 TSL 1 (best) BASIC14.83□□□□□ -0.04
Trav17A0A075B655 Lifr-202ENSMUST00000164529 2844 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.04
Trav17A0A075B655 Tgfb1-201ENSMUST00000002678 2175 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Trav17A0A075B655 Adcy2-201ENSMUST00000022013 4211 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Trav17A0A075B655 Pacsin3-203ENSMUST00000111349 1993 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Trav17A0A075B655 Actl6a-201ENSMUST00000029214 2010 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Trav17A0A075B655 Vapa-201ENSMUST00000024897 1640 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Trav17A0A075B655 Atp2c1-201ENSMUST00000038118 4876 ntAPPRIS P3 TSL 1 (best) BASIC14.82□□□□□ -0.04
Trav17A0A075B655 Bcor-206ENSMUST00000124033 6785 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
Trav17A0A075B655 4930439D14Rik-201ENSMUST00000186765 359 ntBASIC14.82□□□□□ -0.04
Trav17A0A075B655 Kmt5b-201ENSMUST00000005518 1283 ntAPPRIS ALT2 TSL 5 BASIC14.82□□□□□ -0.04
Trav17A0A075B655 Gm5812-201ENSMUST00000061073 957 ntBASIC14.82□□□□□ -0.04
Trav17A0A075B655 Nr2c2ap-201ENSMUST00000095273 1161 ntAPPRIS P2 TSL 1 (best) BASIC14.82□□□□□ -0.04
Trav17A0A075B655 Aire-203ENSMUST00000105396 1749 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
Trav17A0A075B655 Aire-214ENSMUST00000154374 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
Trav17A0A075B655 Aire-215ENSMUST00000155021 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
Trav17A0A075B655 3010003L21Rik-201ENSMUST00000047953 1729 ntTSL 5 BASIC14.82□□□□□ -0.04
Trav17A0A075B655 Stmn4-201ENSMUST00000074523 1303 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Trav17A0A075B655 Pxdc1-202ENSMUST00000053459 2684 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Trav17A0A075B655 Garem1-201ENSMUST00000049260 4923 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Trav17A0A075B655 Hpn-202ENSMUST00000108102 1830 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Trav17A0A075B655 Tpra1-201ENSMUST00000055022 1820 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Trav17A0A075B655 AC123834.2-201ENSMUST00000224038 2340 ntBASIC14.82□□□□□ -0.04
Trav17A0A075B655 Creld1-201ENSMUST00000032422 2306 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Trav17A0A075B655 Bicdl1-203ENSMUST00000118576 1874 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Trav17A0A075B655 Anks1b-217ENSMUST00000182550 1868 ntTSL 5 BASIC14.82□□□□□ -0.04
Trav17A0A075B655 Tmem214-202ENSMUST00000201203 6110 ntAPPRIS P2 TSL 1 (best) BASIC14.82□□□□□ -0.04
Trav17A0A075B655 Sh3bp1-202ENSMUST00000061239 1917 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Trav17A0A075B655 Gorasp2-202ENSMUST00000112201 2417 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
Trav17A0A075B655 Nr4a1-201ENSMUST00000023779 2474 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Trav17A0A075B655 Foxo3-204ENSMUST00000175881 2535 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Trav17A0A075B655 Rad1-201ENSMUST00000022856 1514 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Trav17A0A075B655 Rbm24-201ENSMUST00000037923 3086 ntAPPRIS P1 TSL 2 BASIC14.81□□□□□ -0.04
Trav17A0A075B655 Actl6b-205ENSMUST00000139395 1592 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Trav17A0A075B655 Gm28523-201ENSMUST00000190040 1588 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Trav17A0A075B655 Slc10a4-201ENSMUST00000031127 2106 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Trav17A0A075B655 Klf16-201ENSMUST00000038558 2674 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Trav17A0A075B655 Frmd3-202ENSMUST00000098006 2205 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
Trav17A0A075B655 Klhl25-202ENSMUST00000171155 3403 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Trav17A0A075B655 Ctbp2-201ENSMUST00000033269 2321 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Trav17A0A075B655 Kras-202ENSMUST00000111710 1194 ntTSL 5 BASIC14.81□□□□□ -0.04
Trav17A0A075B655 BC017158-201ENSMUST00000033044 2627 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Trav17A0A075B655 Exoc3l2-202ENSMUST00000137613 4016 ntAPPRIS P1 TSL 5 BASIC14.81□□□□□ -0.04
Trav17A0A075B655 Herpud2-201ENSMUST00000008573 2781 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Trav17A0A075B655 Gm9828-202ENSMUST00000126622 1446 ntTSL 3 BASIC14.81□□□□□ -0.04
Trav17A0A075B655 Edem1-201ENSMUST00000089162 5817 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Trav17A0A075B655 Gm44832-201ENSMUST00000208849 2303 ntBASIC14.81□□□□□ -0.04
Trav17A0A075B655 Anks1b-208ENSMUST00000182053 1649 ntTSL 5 BASIC14.81□□□□□ -0.04
Trav17A0A075B655 Adpgk-205ENSMUST00000217570 2484 ntAPPRIS P2 TSL 1 (best) BASIC14.8□□□□□ -0.04
Trav17A0A075B655 Gm12660-201ENSMUST00000123764 664 ntTSL 3 BASIC14.8□□□□□ -0.04
Trav17A0A075B655 Gm9959-201ENSMUST00000068277 390 ntBASIC14.8□□□□□ -0.04
Trav17A0A075B655 Faxc-201ENSMUST00000029908 2627 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Trav17A0A075B655 Gm45606-201ENSMUST00000209836 2795 ntBASIC14.8□□□□□ -0.04
Trav17A0A075B655 Gm11373-201ENSMUST00000129791 2819 ntTSL 5 BASIC14.8□□□□□ -0.04
Trav17A0A075B655 4930412F12Rik-201ENSMUST00000211700 1471 ntBASIC14.8□□□□□ -0.04
Trav17A0A075B655 Pwwp2b-201ENSMUST00000093993 3057 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Trav17A0A075B655 Alg1-201ENSMUST00000049207 1669 ntAPPRIS ALT2 TSL 2 BASIC14.8□□□□□ -0.04
Trav17A0A075B655 Eid2b-201ENSMUST00000094651 1751 ntAPPRIS P1 BASIC14.8□□□□□ -0.04
Trav17A0A075B655 Tulp1-201ENSMUST00000041819 2017 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Trav17A0A075B655 Ddx39b-203ENSMUST00000173731 2848 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Retrieved 100 of 76,532 protein–RNA pairs in 21.6 ms