Protein–RNA interactions for Protein: Q3TL54

Trim43a, Tripartite motif-containing protein 43A, mousemouse

Predictions only

Length 445 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim43aQ3TL54 Gm20522-201ENSMUST00000173576 784 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
Trim43aQ3TL54 Il4i1-201ENSMUST00000033015 2048 ntAPPRIS P3 TSL 1 (best) BASIC19.84■□□□□ 0.77
Trim43aQ3TL54 Dap3-201ENSMUST00000090938 4760 ntAPPRIS P2 TSL 1 (best) BASIC19.84■□□□□ 0.77
Trim43aQ3TL54 Atf5-202ENSMUST00000107893 1735 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Trim43aQ3TL54 Kcnt1-203ENSMUST00000114172 5219 ntAPPRIS ALT2 TSL 1 (best) BASIC19.83■□□□□ 0.77
Trim43aQ3TL54 Mmadhc-201ENSMUST00000102769 1342 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Trim43aQ3TL54 Stmn4-201ENSMUST00000074523 1303 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Trim43aQ3TL54 Vgf-204ENSMUST00000190827 2834 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Trim43aQ3TL54 Kdm1a-202ENSMUST00000105847 3028 ntAPPRIS ALT2 TSL 5 BASIC19.83■□□□□ 0.77
Trim43aQ3TL54 Ramp1-202ENSMUST00000165855 852 ntTSL 2 BASIC19.83■□□□□ 0.77
Trim43aQ3TL54 Mrpl16-201ENSMUST00000167199 1122 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Trim43aQ3TL54 Gm27454-201ENSMUST00000185090 204 ntBASIC19.83■□□□□ 0.77
Trim43aQ3TL54 Ttc39b-201ENSMUST00000030205 842 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
Trim43aQ3TL54 Psme3-201ENSMUST00000019470 2664 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
Trim43aQ3TL54 Agpat3-201ENSMUST00000001240 5980 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
Trim43aQ3TL54 Gm4675-202ENSMUST00000164755 2322 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
Trim43aQ3TL54 Sigmar1-202ENSMUST00000071561 1547 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
Trim43aQ3TL54 Nhlh1-201ENSMUST00000059794 2464 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Trim43aQ3TL54 Gm42922-201ENSMUST00000195887 2078 ntBASIC19.82■□□□□ 0.76
Trim43aQ3TL54 Map1lc3b-204ENSMUST00000181826 2633 ntBASIC19.82■□□□□ 0.76
Trim43aQ3TL54 Sptbn4-207ENSMUST00000172269 8737 ntAPPRIS ALT2 TSL 2 BASIC19.82■□□□□ 0.76
Trim43aQ3TL54 Mfsd4a-203ENSMUST00000112370 2565 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
Trim43aQ3TL54 Sox8-202ENSMUST00000173447 928 ntAPPRIS ALT2 TSL 1 (best) BASIC19.82■□□□□ 0.76
Trim43aQ3TL54 Rps2-201ENSMUST00000054289 1094 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Trim43aQ3TL54 Slc25a41-201ENSMUST00000058661 1225 ntAPPRIS P3 TSL 1 (best) BASIC19.82■□□□□ 0.76
Trim43aQ3TL54 6330562C20Rik-201ENSMUST00000098867 784 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
Trim43aQ3TL54 Tuba3b-201ENSMUST00000087445 1775 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Trim43aQ3TL54 Alyref-201ENSMUST00000026125 3527 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Trim43aQ3TL54 D11Wsu47e-202ENSMUST00000106621 2062 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Trim43aQ3TL54 Olfm2-204ENSMUST00000217198 2005 ntAPPRIS ALT2 TSL 3 BASIC19.81■□□□□ 0.76
Trim43aQ3TL54 Khdc3-201ENSMUST00000034737 1681 ntAPPRIS P3 TSL 1 (best) BASIC19.81■□□□□ 0.76
Trim43aQ3TL54 Chka-201ENSMUST00000025760 2319 ntAPPRIS ALT2 TSL 5 BASIC19.81■□□□□ 0.76
Trim43aQ3TL54 Pomgnt2-207ENSMUST00000217610 2413 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Trim43aQ3TL54 Smu1-201ENSMUST00000030117 2418 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Trim43aQ3TL54 Hdgfl3-201ENSMUST00000026094 2865 ntAPPRIS ALT1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Trim43aQ3TL54 Jagn1-201ENSMUST00000101070 1201 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Trim43aQ3TL54 1700064M15Rik-201ENSMUST00000185726 645 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
Trim43aQ3TL54 Epdr1-204ENSMUST00000221014 692 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
Trim43aQ3TL54 Trmt112-201ENSMUST00000088257 957 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Trim43aQ3TL54 Creg1-202ENSMUST00000111432 2163 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Trim43aQ3TL54 Fam71b-201ENSMUST00000063166 2185 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Trim43aQ3TL54 Atrn-201ENSMUST00000028781 8745 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Trim43aQ3TL54 Hoxa11os-201ENSMUST00000134512 1839 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
Trim43aQ3TL54 St8sia5-202ENSMUST00000079618 1989 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Trim43aQ3TL54 Pomgnt2-201ENSMUST00000084743 2365 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Trim43aQ3TL54 Tmtc1-201ENSMUST00000060095 8383 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Trim43aQ3TL54 Hoxa1-202ENSMUST00000120363 2043 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
Trim43aQ3TL54 Jph1-201ENSMUST00000038382 4809 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Trim43aQ3TL54 Pnkd-204ENSMUST00000113805 740 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
Trim43aQ3TL54 Gm6569-201ENSMUST00000154520 811 ntAPPRIS P1 TSL 3 BASIC19.8■□□□□ 0.76
Trim43aQ3TL54 D630036H23Rik-201ENSMUST00000171007 940 ntAPPRIS P1 BASIC19.8■□□□□ 0.76
Trim43aQ3TL54 4930539J05Rik-202ENSMUST00000182865 511 ntTSL 2 BASIC19.8■□□□□ 0.76
Trim43aQ3TL54 Gm43042-201ENSMUST00000198676 1820 ntTSL 5 BASIC19.8■□□□□ 0.76
Trim43aQ3TL54 Panx1-202ENSMUST00000164273 5732 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Trim43aQ3TL54 Gm5464-201ENSMUST00000100453 2156 ntAPPRIS P1 BASIC19.8■□□□□ 0.76
Trim43aQ3TL54 Ache-202ENSMUST00000085934 2176 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Trim43aQ3TL54 Gxylt1-201ENSMUST00000049484 6611 ntAPPRIS P3 TSL 1 (best) BASIC19.8■□□□□ 0.76
Trim43aQ3TL54 Mag-207ENSMUST00000191081 2007 ntAPPRIS ALT1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Trim43aQ3TL54 Disc1-204ENSMUST00000115885 2408 ntAPPRIS ALT2 TSL 5 BASIC19.8■□□□□ 0.76
Trim43aQ3TL54 Disc1-202ENSMUST00000075730 2408 ntAPPRIS P3 TSL 5 BASIC19.8■□□□□ 0.76
Trim43aQ3TL54 Lrrc57-204ENSMUST00000102499 1961 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Trim43aQ3TL54 Ube2d-ps-204ENSMUST00000137510 1846 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
Trim43aQ3TL54 Lsp1-202ENSMUST00000038946 1828 ntAPPRIS P3 TSL 1 (best) BASIC19.79■□□□□ 0.76
Trim43aQ3TL54 Nat14-204ENSMUST00000207687 1415 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Trim43aQ3TL54 Aebp2-202ENSMUST00000087614 3727 ntAPPRIS P4 TSL 1 (best) BASIC19.79■□□□□ 0.76
Trim43aQ3TL54 1700023F06Rik-202ENSMUST00000107026 1127 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
Trim43aQ3TL54 Rps2-ps10-202ENSMUST00000170335 965 ntBASIC19.79■□□□□ 0.76
Trim43aQ3TL54 0610039K10Rik-202ENSMUST00000184724 952 ntBASIC19.79■□□□□ 0.76
Trim43aQ3TL54 Slc9a5-201ENSMUST00000073149 3499 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Trim43aQ3TL54 Lrch3-201ENSMUST00000023491 5536 ntAPPRIS P3 TSL 1 (best) BASIC19.78■□□□□ 0.76
Trim43aQ3TL54 Prkaca-201ENSMUST00000005606 2276 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Trim43aQ3TL54 Rce1-201ENSMUST00000025823 1402 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Trim43aQ3TL54 Atxn7-203ENSMUST00000223880 2946 ntAPPRIS P2 BASIC19.78■□□□□ 0.76
Trim43aQ3TL54 Grk2-202ENSMUST00000088737 3376 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Trim43aQ3TL54 Wdr41-208ENSMUST00000222995 1112 ntTSL 5 BASIC19.78■□□□□ 0.76
Trim43aQ3TL54 Cyc1-201ENSMUST00000023210 1194 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Trim43aQ3TL54 Plekhg3-201ENSMUST00000075249 5138 ntAPPRIS P2 TSL 1 (best) BASIC19.78■□□□□ 0.76
Trim43aQ3TL54 Sdcbp-201ENSMUST00000029912 2745 ntAPPRIS ALT1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Trim43aQ3TL54 Inppl1-202ENSMUST00000165052 4730 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Trim43aQ3TL54 Timm29-201ENSMUST00000062125 3170 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Trim43aQ3TL54 Gm12660-201ENSMUST00000123764 664 ntTSL 3 BASIC19.77■□□□□ 0.76
Trim43aQ3TL54 Igfbp7-202ENSMUST00000163898 1200 ntAPPRIS P4 TSL 5 BASIC19.77■□□□□ 0.76
Trim43aQ3TL54 Ntsr2-202ENSMUST00000220892 846 ntTSL 3 BASIC19.77■□□□□ 0.76
Trim43aQ3TL54 AC138214.1-201ENSMUST00000223838 420 ntAPPRIS P1 BASIC19.77■□□□□ 0.76
Trim43aQ3TL54 Hspb1-201ENSMUST00000005077 903 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Trim43aQ3TL54 Spata33-201ENSMUST00000060133 491 ntAPPRIS P2 TSL 1 (best) BASIC19.77■□□□□ 0.76
Trim43aQ3TL54 Trpc4ap-202ENSMUST00000103140 3091 ntAPPRIS P3 TSL 1 (best) BASIC19.77■□□□□ 0.76
Trim43aQ3TL54 Klhl25-201ENSMUST00000092073 3385 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Trim43aQ3TL54 Por-201ENSMUST00000005651 2636 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Trim43aQ3TL54 Smyd2-201ENSMUST00000027897 1680 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Trim43aQ3TL54 Cblc-201ENSMUST00000043822 1662 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Trim43aQ3TL54 4930540M05Rik-201ENSMUST00000180527 2068 ntTSL 1 (best) BASIC19.77■□□□□ 0.75
Trim43aQ3TL54 Gm26884-201ENSMUST00000181207 3074 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
Trim43aQ3TL54 Cetn4-205ENSMUST00000140956 2981 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
Trim43aQ3TL54 Slc47a2-201ENSMUST00000093029 2377 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Trim43aQ3TL54 Chmp6-201ENSMUST00000026434 1557 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Trim43aQ3TL54 Gm3448-203ENSMUST00000179539 787 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
Trim43aQ3TL54 Gm3448-201ENSMUST00000097399 787 ntAPPRIS P5 TSL 1 (best) BASIC19.76■□□□□ 0.75
Trim43aQ3TL54 Tmtc1-202ENSMUST00000100772 8269 ntTSL 2 BASIC19.76■□□□□ 0.75
Trim43aQ3TL54 5031439G07Rik-201ENSMUST00000047144 6845 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Retrieved 100 of 76,532 protein–RNA pairs in 33.2 ms