Protein–RNA interactions for Protein: E9PZP8

Herc1, HECT and RLD domain-containing E3 ubiquitin protein ligase family member 1, mousemouse

Predictions only

Length 4,859 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Herc1E9PZP8 Gm23935-201ENSMUST00000102303 57 ntBASIC10.72□□□□□ -0.69
Herc1E9PZP8 Gm24270-201ENSMUST00000102326 57 ntBASIC10.72□□□□□ -0.69
Herc1E9PZP8 Gm24245-201ENSMUST00000157318 57 ntBASIC10.72□□□□□ -0.69
Herc1E9PZP8 Mfap2-203ENSMUST00000166376 890 ntAPPRIS P1 TSL 2 BASIC10.72□□□□□ -0.69
Herc1E9PZP8 Nabp2-204ENSMUST00000166608 979 ntTSL 5 BASIC10.72□□□□□ -0.69
Herc1E9PZP8 Rps12-206ENSMUST00000218221 460 ntTSL 5 BASIC10.72□□□□□ -0.69
Herc1E9PZP8 Gm21559-201ENSMUST00000220638 855 ntBASIC10.72□□□□□ -0.69
Herc1E9PZP8 Kctd20-201ENSMUST00000057174 2368 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Herc1E9PZP8 Gm11611-201ENSMUST00000134289 1326 ntTSL 3 BASIC10.71□□□□□ -0.69
Herc1E9PZP8 Tsfm-201ENSMUST00000040560 1206 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Herc1E9PZP8 AC124581.1-201ENSMUST00000225416 1399 ntBASIC10.71□□□□□ -0.69
Herc1E9PZP8 1700096K18Rik-201ENSMUST00000188465 1454 ntBASIC10.71□□□□□ -0.69
Herc1E9PZP8 Ispd-204ENSMUST00000221452 1924 ntAPPRIS ALT2 TSL 1 (best) BASIC10.71□□□□□ -0.69
Herc1E9PZP8 Pura-201ENSMUST00000051301 3145 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Herc1E9PZP8 Dpy30-201ENSMUST00000112571 790 ntAPPRIS P1 TSL 2 BASIC10.71□□□□□ -0.69
Herc1E9PZP8 Gm43347-201ENSMUST00000200226 580 ntBASIC10.71□□□□□ -0.69
Herc1E9PZP8 Kiss1r-202ENSMUST00000219745 979 ntTSL 1 (best) BASIC10.71□□□□□ -0.69
Herc1E9PZP8 Amn-201ENSMUST00000021707 1701 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.7
Herc1E9PZP8 Ntn5-202ENSMUST00000182750 1758 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.7
Herc1E9PZP8 Mir8098-201ENSMUST00000184011 137 ntBASIC10.71□□□□□ -0.7
Herc1E9PZP8 Gm20544-201ENSMUST00000174338 690 ntTSL 3 BASIC10.7□□□□□ -0.7
Herc1E9PZP8 Lypla2-202ENSMUST00000105852 1588 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Herc1E9PZP8 2900052L18Rik-201ENSMUST00000139014 1588 ntTSL 1 (best) BASIC10.7□□□□□ -0.7
Herc1E9PZP8 Krt8-201ENSMUST00000023952 1805 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Herc1E9PZP8 Srsf2-201ENSMUST00000092404 1899 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Herc1E9PZP8 Pus1-203ENSMUST00000086643 1868 ntAPPRIS P4 TSL 1 (best) BASIC10.7□□□□□ -0.7
Herc1E9PZP8 Rhbdl1-202ENSMUST00000183929 1349 ntTSL 5 BASIC10.7□□□□□ -0.7
Herc1E9PZP8 Mall-201ENSMUST00000028856 2006 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Herc1E9PZP8 Fgf20-202ENSMUST00000118639 587 ntTSL 3 BASIC10.7□□□□□ -0.7
Herc1E9PZP8 Gm27357-201ENSMUST00000183754 135 ntBASIC10.7□□□□□ -0.7
Herc1E9PZP8 Gm27702-201ENSMUST00000184512 56 ntBASIC10.7□□□□□ -0.7
Herc1E9PZP8 Cyba-202ENSMUST00000212600 638 ntTSL 1 (best) BASIC10.7□□□□□ -0.7
Herc1E9PZP8 Lce3b-201ENSMUST00000046234 562 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Herc1E9PZP8 Slbp-202ENSMUST00000075670 1027 ntAPPRIS ALT2 TSL 1 (best) BASIC10.7□□□□□ -0.7
Herc1E9PZP8 Mir5130-201ENSMUST00000175160 84 ntBASIC10.7□□□□□ -0.7
Herc1E9PZP8 Cplx3-202ENSMUST00000215487 594 ntTSL 3 BASIC10.7□□□□□ -0.7
Herc1E9PZP8 Coq7-201ENSMUST00000032887 914 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Herc1E9PZP8 Pgam1-201ENSMUST00000011896 1831 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Herc1E9PZP8 Snx15-201ENSMUST00000025702 1635 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Herc1E9PZP8 Fbxo24-201ENSMUST00000031732 2161 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Herc1E9PZP8 Ntng1-204ENSMUST00000106571 1446 ntTSL 5 BASIC10.69□□□□□ -0.7
Herc1E9PZP8 Ntng1-210ENSMUST00000138953 1443 ntTSL 1 (best) BASIC10.69□□□□□ -0.7
Herc1E9PZP8 Rnf181-203ENSMUST00000114095 869 ntTSL 3 BASIC10.69□□□□□ -0.7
Herc1E9PZP8 Tmprss5-205ENSMUST00000170246 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC10.69□□□□□ -0.7
Herc1E9PZP8 Ndel1-203ENSMUST00000108672 1653 ntTSL 1 (best) BASIC10.69□□□□□ -0.7
Herc1E9PZP8 Psmd8-203ENSMUST00000186182 1512 ntAPPRIS P2 TSL 1 (best) BASIC10.69□□□□□ -0.7
Herc1E9PZP8 Gm13127-201ENSMUST00000118978 1389 ntBASIC10.69□□□□□ -0.7
Herc1E9PZP8 Gm18733-201ENSMUST00000173950 856 ntBASIC10.69□□□□□ -0.7
Herc1E9PZP8 Gm28051-201ENSMUST00000179306 445 ntAPPRIS P1 TSL 2 BASIC10.69□□□□□ -0.7
Herc1E9PZP8 Lrrc26-201ENSMUST00000028337 1190 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Herc1E9PZP8 Rpl36al-201ENSMUST00000054544 526 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Herc1E9PZP8 Bud23-202ENSMUST00000085984 1516 ntAPPRIS P2 TSL 1 (best) BASIC10.69□□□□□ -0.7
Herc1E9PZP8 Cst3-201ENSMUST00000028938 860 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Herc1E9PZP8 Sh3rf3-202ENSMUST00000135526 1940 ntTSL 1 (best) BASIC10.69□□□□□ -0.7
Herc1E9PZP8 Rnf8-201ENSMUST00000024817 2077 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Herc1E9PZP8 Hist1h2bh-201ENSMUST00000224359 1679 ntAPPRIS P1 BASIC10.68□□□□□ -0.7
Herc1E9PZP8 AL591207.1-203ENSMUST00000222401 1380 ntTSL 5 BASIC10.68□□□□□ -0.7
Herc1E9PZP8 Tpra1-223ENSMUST00000204765 1738 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Herc1E9PZP8 Pdcd5-202ENSMUST00000120714 767 ntTSL 3 BASIC10.68□□□□□ -0.7
Herc1E9PZP8 Slc35f4-201ENSMUST00000074368 1931 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Herc1E9PZP8 Art5-204ENSMUST00000106937 1713 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Herc1E9PZP8 Pdlim5-211ENSMUST00000198381 1555 ntAPPRIS ALT2 TSL 5 BASIC10.68□□□□□ -0.7
Herc1E9PZP8 Mcoln1-201ENSMUST00000004683 2065 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Herc1E9PZP8 Tnnt1-203ENSMUST00000108587 1059 ntAPPRIS ALT2 TSL 1 (best) BASIC10.68□□□□□ -0.7
Herc1E9PZP8 Gm15723-201ENSMUST00000139331 600 ntTSL 3 BASIC10.68□□□□□ -0.7
Herc1E9PZP8 Gm27002-201ENSMUST00000182789 620 ntTSL 2 BASIC10.68□□□□□ -0.7
Herc1E9PZP8 Vstm2b-203ENSMUST00000205845 1455 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Herc1E9PZP8 Gm15545-203ENSMUST00000150613 1059 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
Herc1E9PZP8 Ppil3-204ENSMUST00000117069 1363 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Herc1E9PZP8 Spc25-202ENSMUST00000112320 1527 ntAPPRIS ALT2 TSL 1 (best) BASIC10.68□□□□□ -0.7
Herc1E9PZP8 Ung-201ENSMUST00000031587 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC10.67□□□□□ -0.7
Herc1E9PZP8 Foxf2-201ENSMUST00000042054 2363 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Herc1E9PZP8 Btn1a1-202ENSMUST00000110434 1077 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
Herc1E9PZP8 Gm27742-201ENSMUST00000184667 60 ntBASIC10.67□□□□□ -0.7
Herc1E9PZP8 Arpc4-204ENSMUST00000204802 794 ntTSL 3 BASIC10.67□□□□□ -0.7
Herc1E9PZP8 Gm18025-201ENSMUST00000221733 862 ntBASIC10.67□□□□□ -0.7
Herc1E9PZP8 Gm10175-201ENSMUST00000086013 645 ntBASIC10.67□□□□□ -0.7
Herc1E9PZP8 Hist1h4j-201ENSMUST00000087714 774 ntAPPRIS P1 BASIC10.67□□□□□ -0.7
Herc1E9PZP8 Crym-201ENSMUST00000033198 1383 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Herc1E9PZP8 E2f1-201ENSMUST00000000894 2755 ntAPPRIS ALT2 TSL 1 (best) BASIC10.67□□□□□ -0.7
Herc1E9PZP8 Slc3a2-201ENSMUST00000010239 1819 ntAPPRIS P3 TSL 1 (best) BASIC10.67□□□□□ -0.7
Herc1E9PZP8 Fez2-202ENSMUST00000112487 2020 ntAPPRIS ALT1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Herc1E9PZP8 2210408F21Rik-210ENSMUST00000151076 539 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
Herc1E9PZP8 Gm2651-201ENSMUST00000203560 838 ntBASIC10.67□□□□□ -0.7
Herc1E9PZP8 Upk3a-201ENSMUST00000023070 1106 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Herc1E9PZP8 Pla2g10-201ENSMUST00000023364 1423 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Herc1E9PZP8 Tnfrsf25-201ENSMUST00000025706 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC10.67□□□□□ -0.7
Herc1E9PZP8 Hspb6-201ENSMUST00000044048 1363 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Herc1E9PZP8 Dlk2-202ENSMUST00000166280 1341 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Herc1E9PZP8 Taf3-202ENSMUST00000114906 583 ntTSL 2 BASIC10.67□□□□□ -0.7
Herc1E9PZP8 Epsti1-202ENSMUST00000169978 1175 ntAPPRIS ALT2 TSL 5 BASIC10.67□□□□□ -0.7
Herc1E9PZP8 Gm43691-201ENSMUST00000196625 697 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
Herc1E9PZP8 Epsti1-203ENSMUST00000227903 1178 ntAPPRIS ALT2 BASIC10.67□□□□□ -0.7
Herc1E9PZP8 Trim47-201ENSMUST00000021120 2204 ntAPPRIS P4 TSL 1 (best) BASIC10.67□□□□□ -0.7
Herc1E9PZP8 Slc35b2-201ENSMUST00000041353 2326 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
Herc1E9PZP8 Gm32050-201ENSMUST00000209793 638 ntTSL 3 BASIC10.67□□□□□ -0.7
Herc1E9PZP8 4930431F12Rik-201ENSMUST00000079389 429 ntTSL 5 BASIC10.67□□□□□ -0.7
Herc1E9PZP8 Arhgef25-205ENSMUST00000218654 2475 ntTSL 5 BASIC10.67□□□□□ -0.7
Herc1E9PZP8 Pacsin1-203ENSMUST00000114872 1647 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Herc1E9PZP8 Dyrk1b-202ENSMUST00000172467 2523 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
Retrieved 100 of 76,532 protein–RNA pairs in 38.8 ms