Protein–RNA interactions for Protein: A0A075B655

Trav17, T cell receptor alpha variable 17 (Fragment), mousemouse

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav17A0A075B655 Cyp4f15-204ENSMUST00000168171 2168 ntAPPRIS P3 TSL 1 (best) BASIC14.91□□□□□ -0.02
Trav17A0A075B655 Gp5-201ENSMUST00000061190 2196 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Trav17A0A075B655 Impdh2-201ENSMUST00000081111 1858 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Trav17A0A075B655 March11-202ENSMUST00000140840 1558 ntAPPRIS P3 TSL 2 BASIC14.91□□□□□ -0.02
Trav17A0A075B655 Inpp4a-201ENSMUST00000027287 5691 ntAPPRIS P2 TSL 5 BASIC14.91□□□□□ -0.02
Trav17A0A075B655 Schip1-201ENSMUST00000029346 2201 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
Trav17A0A075B655 Ly6h-206ENSMUST00000156032 752 ntAPPRIS P3 TSL 3 BASIC14.91□□□□□ -0.02
Trav17A0A075B655 Hrasls-204ENSMUST00000162747 854 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Trav17A0A075B655 A730098A19Rik-201ENSMUST00000188193 978 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
Trav17A0A075B655 Tor3a-208ENSMUST00000190607 453 ntTSL 3 BASIC14.91□□□□□ -0.02
Trav17A0A075B655 Gm46212-201ENSMUST00000220256 1003 ntTSL 5 BASIC14.91□□□□□ -0.02
Trav17A0A075B655 Ly6h-201ENSMUST00000023241 906 ntAPPRIS ALT1 TSL 2 BASIC14.91□□□□□ -0.02
Trav17A0A075B655 Lrrc43-201ENSMUST00000094327 2046 ntAPPRIS P3 TSL 1 (best) BASIC14.91□□□□□ -0.02
Trav17A0A075B655 Dmtn-210ENSMUST00000228824 2377 ntBASIC14.91□□□□□ -0.02
Trav17A0A075B655 Scrib-202ENSMUST00000063747 5440 ntAPPRIS ALT2 TSL 1 (best) BASIC14.91□□□□□ -0.02
Trav17A0A075B655 Rnf157-202ENSMUST00000106398 4553 ntAPPRIS ALT2 TSL 5 BASIC14.91□□□□□ -0.02
Trav17A0A075B655 Rnf112-201ENSMUST00000054927 3086 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
Trav17A0A075B655 Wtap-205ENSMUST00000160781 2442 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
Trav17A0A075B655 Cmtm4-201ENSMUST00000179802 7734 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Trav17A0A075B655 Srm-201ENSMUST00000006611 1338 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Trav17A0A075B655 Them6-201ENSMUST00000070923 1784 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Trav17A0A075B655 Src-203ENSMUST00000109529 2020 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
Trav17A0A075B655 Mtg1-201ENSMUST00000036977 1595 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Trav17A0A075B655 Tbc1d9-202ENSMUST00000093393 5334 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Trav17A0A075B655 Cpd-201ENSMUST00000021201 7946 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Trav17A0A075B655 Arx-201ENSMUST00000046565 2881 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Trav17A0A075B655 Gabra4-205ENSMUST00000199357 2407 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
Trav17A0A075B655 Gm2415-203ENSMUST00000149952 435 ntTSL 5 BASIC14.9□□□□□ -0.02
Trav17A0A075B655 Fuz-214ENSMUST00000209132 853 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
Trav17A0A075B655 Runx2-204ENSMUST00000159943 2316 ntAPPRIS P3 TSL 1 (best) BASIC14.9□□□□□ -0.02
Trav17A0A075B655 Aebp2-202ENSMUST00000087614 3727 ntAPPRIS P4 TSL 1 (best) BASIC14.9□□□□□ -0.02
Trav17A0A075B655 Chst7-201ENSMUST00000044138 2206 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Trav17A0A075B655 Mid1-203ENSMUST00000079443 2815 ntTSL 5 BASIC14.9□□□□□ -0.02
Trav17A0A075B655 Azi2-207ENSMUST00000134433 2499 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
Trav17A0A075B655 Gas1-201ENSMUST00000065086 2961 ntAPPRIS ALT2 BASIC14.9□□□□□ -0.02
Trav17A0A075B655 Gm15853-202ENSMUST00000195518 2041 ntBASIC14.9□□□□□ -0.02
Trav17A0A075B655 Gas2l1-203ENSMUST00000109895 2530 ntAPPRIS P3 TSL 1 (best) BASIC14.9□□□□□ -0.02
Trav17A0A075B655 Zfp618-201ENSMUST00000030043 1582 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
Trav17A0A075B655 Ica1-203ENSMUST00000115519 1706 ntAPPRIS ALT2 TSL 5 BASIC14.89□□□□□ -0.03
Trav17A0A075B655 Ssc4d-203ENSMUST00000111152 2745 ntAPPRIS P1 TSL 5 BASIC14.89□□□□□ -0.03
Trav17A0A075B655 Syncrip-205ENSMUST00000173801 2944 ntAPPRIS ALT1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Trav17A0A075B655 Sec24d-208ENSMUST00000200333 307 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Trav17A0A075B655 Fkbp1b-201ENSMUST00000020964 976 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Trav17A0A075B655 Gltpd2-201ENSMUST00000057685 1216 ntAPPRIS P2 TSL 1 (best) BASIC14.89□□□□□ -0.03
Trav17A0A075B655 Sprtn-201ENSMUST00000034467 4464 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Trav17A0A075B655 Maff-201ENSMUST00000096350 1933 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Trav17A0A075B655 Sox30-201ENSMUST00000049038 2997 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Trav17A0A075B655 Phf14-202ENSMUST00000115510 3353 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Trav17A0A075B655 Swsap1-201ENSMUST00000053583 1838 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Trav17A0A075B655 Nf2-205ENSMUST00000109910 4720 ntAPPRIS P3 TSL 1 (best) BASIC14.89□□□□□ -0.03
Trav17A0A075B655 Mpg-201ENSMUST00000020528 1737 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Trav17A0A075B655 Lrch3-208ENSMUST00000165616 1875 ntTSL 5 BASIC14.89□□□□□ -0.03
Trav17A0A075B655 Jmy-201ENSMUST00000065537 8776 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Trav17A0A075B655 Cyb5r4-201ENSMUST00000168529 2644 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Trav17A0A075B655 Slc35a2-203ENSMUST00000115663 1527 ntAPPRIS P4 TSL 2 BASIC14.88□□□□□ -0.03
Trav17A0A075B655 Pqlc1-207ENSMUST00000140594 2356 ntAPPRIS P3 TSL 1 (best) BASIC14.88□□□□□ -0.03
Trav17A0A075B655 Anp32e-210ENSMUST00000171368 878 ntTSL 3 BASIC14.88□□□□□ -0.03
Trav17A0A075B655 Sec61a2-201ENSMUST00000026926 756 ntTSL 5 BASIC14.88□□□□□ -0.03
Trav17A0A075B655 Atp6v1f-201ENSMUST00000004396 703 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Trav17A0A075B655 C1ql4-201ENSMUST00000064462 874 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Trav17A0A075B655 Dgcr6-201ENSMUST00000066027 1050 ntAPPRIS P4 TSL 2 BASIC14.88□□□□□ -0.03
Trav17A0A075B655 Acbd6-203ENSMUST00000097529 1255 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Trav17A0A075B655 Dusp8-201ENSMUST00000039926 4804 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Trav17A0A075B655 Sec61a2-202ENSMUST00000102981 2448 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Trav17A0A075B655 Cckbr-201ENSMUST00000033189 2573 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Trav17A0A075B655 Fam46c-201ENSMUST00000061455 5640 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Trav17A0A075B655 Itgb5-201ENSMUST00000069345 3056 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Trav17A0A075B655 Gm10209-201ENSMUST00000203397 1607 ntBASIC14.88□□□□□ -0.03
Trav17A0A075B655 Zfp78-205ENSMUST00000208030 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
Trav17A0A075B655 Gnao1-207ENSMUST00000138659 5526 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Trav17A0A075B655 Gm11586-201ENSMUST00000123060 566 ntTSL 2 BASIC14.87□□□□□ -0.03
Trav17A0A075B655 Kcnma1-215ENSMUST00000190339 890 ntTSL 5 BASIC14.87□□□□□ -0.03
Trav17A0A075B655 Cbx2-201ENSMUST00000026662 3807 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Trav17A0A075B655 Pip5k1c-202ENSMUST00000105327 2551 ntAPPRIS P3 TSL 1 (best) BASIC14.87□□□□□ -0.03
Trav17A0A075B655 Cdca4-201ENSMUST00000062092 2425 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Trav17A0A075B655 Mgme1-203ENSMUST00000110028 2308 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Trav17A0A075B655 Ncor1-203ENSMUST00000069456 3171 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Trav17A0A075B655 Trim58-201ENSMUST00000075084 2192 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Trav17A0A075B655 Fam53a-202ENSMUST00000065119 2009 ntAPPRIS P2 TSL 1 (best) BASIC14.87□□□□□ -0.03
Trav17A0A075B655 Fbxw5-201ENSMUST00000015239 2388 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Trav17A0A075B655 Leng1-201ENSMUST00000019878 2222 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Trav17A0A075B655 9330171B17Rik-201ENSMUST00000035939 2073 ntBASIC14.86□□□□□ -0.03
Trav17A0A075B655 Col9a3-203ENSMUST00000132527 3046 ntAPPRIS P1 TSL 5 BASIC14.86□□□□□ -0.03
Trav17A0A075B655 Otud5-201ENSMUST00000033494 4259 ntAPPRIS P3 TSL 1 (best) BASIC14.86□□□□□ -0.03
Trav17A0A075B655 Adam22-205ENSMUST00000115385 2318 ntTSL 2 BASIC14.86□□□□□ -0.03
Trav17A0A075B655 Faim-202ENSMUST00000112911 803 ntAPPRIS ALT1 TSL 2 BASIC14.86□□□□□ -0.03
Trav17A0A075B655 4930519P11Rik-201ENSMUST00000181369 501 ntAPPRIS P1 BASIC14.86□□□□□ -0.03
Trav17A0A075B655 Aldoa-ps3-201ENSMUST00000217558 306 ntBASIC14.86□□□□□ -0.03
Trav17A0A075B655 8430432A02Rik-201ENSMUST00000039080 1248 ntBASIC14.86□□□□□ -0.03
Trav17A0A075B655 Gm7856-201ENSMUST00000117514 1493 ntBASIC14.86□□□□□ -0.03
Trav17A0A075B655 Ddx41-201ENSMUST00000021956 2205 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Trav17A0A075B655 Hopxos-201ENSMUST00000148568 1661 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Trav17A0A075B655 Gm45141-201ENSMUST00000206502 1888 ntBASIC14.86□□□□□ -0.03
Trav17A0A075B655 Etnk1-203ENSMUST00000204947 1791 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Trav17A0A075B655 Stac3-201ENSMUST00000035839 1790 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Trav17A0A075B655 Grk2-202ENSMUST00000088737 3376 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Trav17A0A075B655 Iqsec2-202ENSMUST00000112604 5967 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
Trav17A0A075B655 Alyref-201ENSMUST00000026125 3527 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Trav17A0A075B655 Tex30-212ENSMUST00000152239 1046 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Trav17A0A075B655 A030005L19Rik-201ENSMUST00000220768 806 ntAPPRIS P1 BASIC14.85□□□□□ -0.03
Retrieved 100 of 76,532 protein–RNA pairs in 17.1 ms