Protein–RNA interactions for Protein: S4R1E0

H2afb1, Histone H2A, mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H2afb1S4R1E0 Paics-201ENSMUST00000031160 2482 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
H2afb1S4R1E0 Fbxw5-201ENSMUST00000015239 2388 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
H2afb1S4R1E0 Csf1-203ENSMUST00000120243 2097 ntAPPRIS P3 TSL 1 (best) BASIC17.08■□□□□ 0.32
H2afb1S4R1E0 Gm26884-201ENSMUST00000181207 3074 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
H2afb1S4R1E0 Ciapin1-201ENSMUST00000034233 1807 ntAPPRIS P1 TSL 5 BASIC17.07■□□□□ 0.32
H2afb1S4R1E0 Gm10571-201ENSMUST00000097869 1638 ntBASIC17.07■□□□□ 0.32
H2afb1S4R1E0 Rer1-201ENSMUST00000030914 1596 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
H2afb1S4R1E0 Smarca4-201ENSMUST00000034707 6354 ntAPPRIS P3 TSL 1 (best) BASIC17.07■□□□□ 0.32
H2afb1S4R1E0 Pianp-201ENSMUST00000032479 2250 ntAPPRIS P2 TSL 1 (best) BASIC17.07■□□□□ 0.32
H2afb1S4R1E0 Mgll-202ENSMUST00000113581 1308 ntTSL 5 BASIC17.07■□□□□ 0.32
H2afb1S4R1E0 Gm9922-201ENSMUST00000066461 435 ntAPPRIS P1 BASIC17.07■□□□□ 0.32
H2afb1S4R1E0 AC126028.2-201ENSMUST00000228100 1833 ntBASIC17.07■□□□□ 0.32
H2afb1S4R1E0 Stac3-201ENSMUST00000035839 1790 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
H2afb1S4R1E0 Ildr2-204ENSMUST00000192732 2263 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
H2afb1S4R1E0 Pcf11-201ENSMUST00000119954 5995 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
H2afb1S4R1E0 4930452B06Rik-201ENSMUST00000102996 2681 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
H2afb1S4R1E0 Sra1-201ENSMUST00000001415 2061 ntAPPRIS P4 TSL 5 BASIC17.06■□□□□ 0.32
H2afb1S4R1E0 Sqstm1-202ENSMUST00000102774 2037 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
H2afb1S4R1E0 Nipa2-202ENSMUST00000117812 3039 ntAPPRIS P1 TSL 2 BASIC17.06■□□□□ 0.32
H2afb1S4R1E0 Baiap2-202ENSMUST00000075180 3518 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
H2afb1S4R1E0 1110065P20Rik-206ENSMUST00000185036 1223 ntTSL 2 BASIC17.06■□□□□ 0.32
H2afb1S4R1E0 Gm35558-201ENSMUST00000222675 2219 ntBASIC17.06■□□□□ 0.32
H2afb1S4R1E0 Kcnb1-201ENSMUST00000059826 4015 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
H2afb1S4R1E0 Dolk-201ENSMUST00000100219 2104 ntAPPRIS P1 BASIC17.06■□□□□ 0.32
H2afb1S4R1E0 Prkci-201ENSMUST00000108249 4708 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
H2afb1S4R1E0 Slc39a5-202ENSMUST00000167859 2025 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
H2afb1S4R1E0 Nsun2-202ENSMUST00000109699 2834 ntAPPRIS P2 TSL 1 (best) BASIC17.06■□□□□ 0.32
H2afb1S4R1E0 Mink1-201ENSMUST00000072237 4994 ntAPPRIS ALT2 TSL 5 BASIC17.06■□□□□ 0.32
H2afb1S4R1E0 Bend4-204ENSMUST00000201972 8268 ntAPPRIS P1 TSL 5 BASIC17.06■□□□□ 0.32
H2afb1S4R1E0 Nkd1-201ENSMUST00000034086 3035 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
H2afb1S4R1E0 Ttc19-201ENSMUST00000050646 3410 ntAPPRIS P3 TSL 1 (best) BASIC17.05■□□□□ 0.32
H2afb1S4R1E0 Stim2-204ENSMUST00000201469 4892 ntAPPRIS ALT2 TSL 5 BASIC17.05■□□□□ 0.32
H2afb1S4R1E0 Dnpep-204ENSMUST00000185797 2510 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
H2afb1S4R1E0 Eomes-202ENSMUST00000111763 2869 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
H2afb1S4R1E0 Gemin7-203ENSMUST00000119912 653 ntAPPRIS P1 TSL 3 BASIC17.05■□□□□ 0.32
H2afb1S4R1E0 Usf2-211ENSMUST00000172417 648 ntTSL 5 BASIC17.05■□□□□ 0.32
H2afb1S4R1E0 Spr-203ENSMUST00000174769 1029 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
H2afb1S4R1E0 Gm7160-202ENSMUST00000188519 1027 ntBASIC17.05■□□□□ 0.32
H2afb1S4R1E0 Rfxap-204ENSMUST00000217267 696 ntAPPRIS P2 TSL 1 (best) BASIC17.05■□□□□ 0.32
H2afb1S4R1E0 Rnaset2b-201ENSMUST00000089119 1013 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
H2afb1S4R1E0 Vps26a-201ENSMUST00000092473 2712 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
H2afb1S4R1E0 Sbf1-201ENSMUST00000123791 6190 ntAPPRIS P3 TSL 1 (best) BASIC17.05■□□□□ 0.32
H2afb1S4R1E0 Uhmk1-202ENSMUST00000123399 7775 ntTSL 5 BASIC17.05■□□□□ 0.32
H2afb1S4R1E0 Gm3667-201ENSMUST00000171906 2053 ntAPPRIS P1 TSL 5 BASIC17.05■□□□□ 0.32
H2afb1S4R1E0 Crlf2-203ENSMUST00000200284 1405 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
H2afb1S4R1E0 Dlg1-205ENSMUST00000115201 3248 ntTSL 5 BASIC17.04■□□□□ 0.32
H2afb1S4R1E0 Hopxos-201ENSMUST00000148568 1661 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
H2afb1S4R1E0 Arhgap44-202ENSMUST00000093001 2256 ntTSL 2 BASIC17.04■□□□□ 0.32
H2afb1S4R1E0 Sdc3-201ENSMUST00000070478 4973 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
H2afb1S4R1E0 Pcnx-204ENSMUST00000221721 8318 ntAPPRIS ALT2 TSL 5 BASIC17.04■□□□□ 0.32
H2afb1S4R1E0 Scrib-201ENSMUST00000002603 5599 ntAPPRIS P3 TSL 1 (best) BASIC17.04■□□□□ 0.32
H2afb1S4R1E0 Kcne1l-201ENSMUST00000134825 1543 ntAPPRIS P1 BASIC17.04■□□□□ 0.32
H2afb1S4R1E0 Ripply3-201ENSMUST00000023660 1531 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
H2afb1S4R1E0 Prmt3-201ENSMUST00000032715 2507 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
H2afb1S4R1E0 Tuba1b-201ENSMUST00000077577 1743 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
H2afb1S4R1E0 Rce1-201ENSMUST00000025823 1402 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
H2afb1S4R1E0 Hs3st5-202ENSMUST00000167191 2408 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
H2afb1S4R1E0 Tbkbp1-203ENSMUST00000107614 2391 ntAPPRIS ALT2 TSL 5 BASIC17.03■□□□□ 0.32
H2afb1S4R1E0 Ppp2r1b-209ENSMUST00000176349 1890 ntAPPRIS ALT2 TSL 5 BASIC17.03■□□□□ 0.32
H2afb1S4R1E0 Rbm24-201ENSMUST00000037923 3086 ntAPPRIS P1 TSL 2 BASIC17.03■□□□□ 0.32
H2afb1S4R1E0 Jagn1-201ENSMUST00000101070 1201 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
H2afb1S4R1E0 Mrpl16-201ENSMUST00000167199 1122 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
H2afb1S4R1E0 Prr3-204ENSMUST00000172900 439 ntTSL 2 BASIC17.03■□□□□ 0.32
H2afb1S4R1E0 AC124603.1-201ENSMUST00000223843 308 ntBASIC17.03■□□□□ 0.32
H2afb1S4R1E0 Fgfr3-202ENSMUST00000087820 2630 ntAPPRIS ALT2 TSL 5 BASIC17.03■□□□□ 0.32
H2afb1S4R1E0 Adam22-205ENSMUST00000115385 2318 ntTSL 2 BASIC17.03■□□□□ 0.32
H2afb1S4R1E0 Pgf-204ENSMUST00000223220 2080 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
H2afb1S4R1E0 Sbspon-201ENSMUST00000040695 2748 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
H2afb1S4R1E0 Abhd13-201ENSMUST00000048216 5074 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
H2afb1S4R1E0 Zfp804a-201ENSMUST00000047527 4620 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
H2afb1S4R1E0 Tesk1-201ENSMUST00000060864 3947 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
H2afb1S4R1E0 Tesmin-201ENSMUST00000025840 2234 ntAPPRIS P3 TSL 1 (best) BASIC17.02■□□□□ 0.32
H2afb1S4R1E0 Arhgap35-201ENSMUST00000075845 9147 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
H2afb1S4R1E0 Mfsd14a-201ENSMUST00000029570 2782 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
H2afb1S4R1E0 Sebox-202ENSMUST00000125670 1300 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
H2afb1S4R1E0 Sobp-201ENSMUST00000040275 4980 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
H2afb1S4R1E0 Kansl1l-201ENSMUST00000068168 4459 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
H2afb1S4R1E0 Fam168b-208ENSMUST00000191307 844 ntTSL 2 BASIC17.02■□□□□ 0.32
H2afb1S4R1E0 Spata33-201ENSMUST00000060133 491 ntAPPRIS P2 TSL 1 (best) BASIC17.02■□□□□ 0.32
H2afb1S4R1E0 Papola-212ENSMUST00000168186 2436 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
H2afb1S4R1E0 BC034090-204ENSMUST00000186156 4873 ntAPPRIS P5 TSL 5 BASIC17.02■□□□□ 0.31
H2afb1S4R1E0 Kdelr3-201ENSMUST00000010974 1414 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
H2afb1S4R1E0 Hnrnpul2-201ENSMUST00000096753 5726 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
H2afb1S4R1E0 Clcn4-206ENSMUST00000210594 2539 ntAPPRIS ALT2 TSL 5 BASIC17.02■□□□□ 0.31
H2afb1S4R1E0 Pgs1-203ENSMUST00000132676 2863 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
H2afb1S4R1E0 Lypla2-202ENSMUST00000105852 1588 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
H2afb1S4R1E0 1700086O06Rik-202ENSMUST00000181871 1564 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
H2afb1S4R1E0 Trim72-202ENSMUST00000106248 2134 ntAPPRIS P1 TSL 5 BASIC17.02■□□□□ 0.31
H2afb1S4R1E0 Tub-201ENSMUST00000033341 5997 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
H2afb1S4R1E0 Spint2-201ENSMUST00000098604 1384 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
H2afb1S4R1E0 1810055G02Rik-201ENSMUST00000039048 1882 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
H2afb1S4R1E0 Iqsec2-207ENSMUST00000168786 5993 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
H2afb1S4R1E0 Ddx41-201ENSMUST00000021956 2205 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
H2afb1S4R1E0 Kcnq2-203ENSMUST00000081528 2382 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
H2afb1S4R1E0 Hdgfl3-201ENSMUST00000026094 2865 ntAPPRIS ALT1 TSL 1 (best) BASIC17.01■□□□□ 0.31
H2afb1S4R1E0 U2af2-201ENSMUST00000005041 2183 ntAPPRIS ALT1 TSL 1 (best) BASIC17.01■□□□□ 0.31
H2afb1S4R1E0 Zfp771-201ENSMUST00000052509 1484 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
H2afb1S4R1E0 Gm43137-201ENSMUST00000198052 594 ntBASIC17.01■□□□□ 0.31
H2afb1S4R1E0 Wdr41-208ENSMUST00000222995 1112 ntTSL 5 BASIC17.01■□□□□ 0.31
H2afb1S4R1E0 AC158777.2-201ENSMUST00000228787 398 ntAPPRIS P1 BASIC17.01■□□□□ 0.31
Retrieved 100 of 76,532 protein–RNA pairs in 19.3 ms