Protein–RNA interactions for Protein: Q9DA80

Rsph3b, Radial spoke head protein 3 homolog B, mousemouse

Predictions only

Length 389 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rsph3bQ9DA80 Nrg3-203ENSMUST00000173780 2137 ntAPPRIS ALT2 TSL 5 BASIC20.68■□□□□ 0.9
Rsph3bQ9DA80 Paqr6-204ENSMUST00000147991 1670 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Rsph3bQ9DA80 Coq9-201ENSMUST00000034234 1789 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Rsph3bQ9DA80 Fam98c-203ENSMUST00000134176 1189 ntTSL 2 BASIC20.68■□□□□ 0.9
Rsph3bQ9DA80 Metrn-202ENSMUST00000165838 1363 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Rsph3bQ9DA80 Sfrp5-201ENSMUST00000018966 1900 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Rsph3bQ9DA80 Ankle2-201ENSMUST00000031474 5215 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
Rsph3bQ9DA80 Pllp-201ENSMUST00000034227 1926 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Rsph3bQ9DA80 H2afx-201ENSMUST00000052686 1384 ntAPPRIS P1 BASIC20.68■□□□□ 0.9
Rsph3bQ9DA80 Shox2-201ENSMUST00000029422 3079 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Rsph3bQ9DA80 Sys1-202ENSMUST00000109352 2001 ntAPPRIS P1 TSL 5 BASIC20.68■□□□□ 0.9
Rsph3bQ9DA80 AC131586.2-201ENSMUST00000228370 1512 ntBASIC20.68■□□□□ 0.9
Rsph3bQ9DA80 Rabac1-203ENSMUST00000205871 986 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
Rsph3bQ9DA80 Park7-201ENSMUST00000030805 908 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Rsph3bQ9DA80 1700018M17Rik-201ENSMUST00000052502 456 ntBASIC20.67■□□□□ 0.9
Rsph3bQ9DA80 AB124611-202ENSMUST00000086361 1310 ntAPPRIS ALT2 TSL 1 (best) BASIC20.67■□□□□ 0.9
Rsph3bQ9DA80 Dxo-211ENSMUST00000180043 1447 ntAPPRIS P1 TSL 5 BASIC20.67■□□□□ 0.9
Rsph3bQ9DA80 Gm26660-201ENSMUST00000181582 2543 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
Rsph3bQ9DA80 Scn1b-203ENSMUST00000211945 1501 ntAPPRIS P1 TSL 5 BASIC20.67■□□□□ 0.9
Rsph3bQ9DA80 Zfp444-203ENSMUST00000108566 1648 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Rsph3bQ9DA80 Qpct-201ENSMUST00000040789 1924 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Rsph3bQ9DA80 Wnk2-201ENSMUST00000035538 6630 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
Rsph3bQ9DA80 Dmrta2-201ENSMUST00000061187 2922 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Rsph3bQ9DA80 Dsg2-203ENSMUST00000121837 953 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
Rsph3bQ9DA80 Tex30-212ENSMUST00000152239 1046 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Rsph3bQ9DA80 Nt5c-201ENSMUST00000021082 858 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Rsph3bQ9DA80 Gm45890-201ENSMUST00000212043 1026 ntTSL 5 BASIC20.66■□□□□ 0.9
Rsph3bQ9DA80 Rab5c-201ENSMUST00000019317 1967 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
Rsph3bQ9DA80 Cltb-202ENSMUST00000091609 2186 ntAPPRIS P3 TSL 1 (best) BASIC20.66■□□□□ 0.9
Rsph3bQ9DA80 Arid1a-202ENSMUST00000105897 8175 ntAPPRIS P2 TSL 5 BASIC20.66■□□□□ 0.9
Rsph3bQ9DA80 Fkbp9-201ENSMUST00000031795 3009 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Rsph3bQ9DA80 Oaf-201ENSMUST00000034512 2526 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Rsph3bQ9DA80 Adap2-201ENSMUST00000021050 1785 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Rsph3bQ9DA80 Gm30003-201ENSMUST00000200700 1433 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
Rsph3bQ9DA80 Eif1-201ENSMUST00000049385 1322 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Rsph3bQ9DA80 Rex1bd-206ENSMUST00000136913 671 ntAPPRIS ALT2 TSL 5 BASIC20.65■□□□□ 0.9
Rsph3bQ9DA80 Gm10653-202ENSMUST00000139570 835 ntBASIC20.65■□□□□ 0.9
Rsph3bQ9DA80 2310068J16Rik-201ENSMUST00000188271 1124 ntBASIC20.65■□□□□ 0.9
Rsph3bQ9DA80 Gm40460-201ENSMUST00000211591 735 ntAPPRIS P1 BASIC20.65■□□□□ 0.9
Rsph3bQ9DA80 Selenom-201ENSMUST00000094469 707 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Rsph3bQ9DA80 Dennd3-201ENSMUST00000043414 5299 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Rsph3bQ9DA80 Fam117b-201ENSMUST00000036540 5532 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Rsph3bQ9DA80 St3gal4-201ENSMUST00000034537 2095 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Rsph3bQ9DA80 Lsr-205ENSMUST00000205961 2021 ntAPPRIS P3 TSL 1 (best) BASIC20.65■□□□□ 0.9
Rsph3bQ9DA80 Rell2-202ENSMUST00000091932 1995 ntTSL 2 BASIC20.65■□□□□ 0.9
Rsph3bQ9DA80 Vim-206ENSMUST00000193675 1777 ntAPPRIS ALT2 TSL 5 BASIC20.64■□□□□ 0.9
Rsph3bQ9DA80 Cyp4f13-201ENSMUST00000075253 1752 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
Rsph3bQ9DA80 Capzb-203ENSMUST00000102507 1702 ntAPPRIS P4 TSL 1 (best) BASIC20.64■□□□□ 0.9
Rsph3bQ9DA80 Nat9-201ENSMUST00000103038 1143 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Rsph3bQ9DA80 Rps2-ps11-201ENSMUST00000195283 868 ntBASIC20.64■□□□□ 0.89
Rsph3bQ9DA80 Ubr5-201ENSMUST00000110336 9242 ntTSL 5 BASIC20.64■□□□□ 0.89
Rsph3bQ9DA80 Lhx2-203ENSMUST00000143783 1696 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
Rsph3bQ9DA80 Matk-204ENSMUST00000120265 1618 ntAPPRIS ALT2 TSL 5 BASIC20.64■□□□□ 0.89
Rsph3bQ9DA80 Eefsec-206ENSMUST00000205179 2208 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
Rsph3bQ9DA80 3110062M04Rik-202ENSMUST00000115006 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC20.63■□□□□ 0.89
Rsph3bQ9DA80 Gbx2-201ENSMUST00000036954 2135 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Rsph3bQ9DA80 Daxx-202ENSMUST00000170075 2673 ntAPPRIS P2 TSL 1 (best) BASIC20.63■□□□□ 0.89
Rsph3bQ9DA80 Mtfr1l-201ENSMUST00000102550 2025 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Rsph3bQ9DA80 Stoml1-201ENSMUST00000034883 1984 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Rsph3bQ9DA80 1810010K12Rik-201ENSMUST00000070378 1324 ntBASIC20.63■□□□□ 0.89
Rsph3bQ9DA80 Ube2d-ps-204ENSMUST00000137510 1846 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
Rsph3bQ9DA80 Tomm6-201ENSMUST00000113301 594 ntAPPRIS P1 TSL 2 BASIC20.63■□□□□ 0.89
Rsph3bQ9DA80 2610035F20Rik-202ENSMUST00000177306 1149 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
Rsph3bQ9DA80 Mfap2-201ENSMUST00000071977 1073 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Rsph3bQ9DA80 Spns2-201ENSMUST00000045303 3241 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Rsph3bQ9DA80 Trabd-206ENSMUST00000169891 1422 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
Rsph3bQ9DA80 Galnt11-201ENSMUST00000045737 2552 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Rsph3bQ9DA80 Cachd1-201ENSMUST00000030257 5765 ntAPPRIS P2 TSL 1 (best) BASIC20.62■□□□□ 0.89
Rsph3bQ9DA80 9430060I03Rik-201ENSMUST00000191563 1689 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
Rsph3bQ9DA80 Ndufb2-202ENSMUST00000119379 455 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Rsph3bQ9DA80 Jsrp1-201ENSMUST00000020435 955 ntAPPRIS ALT2 TSL 2 BASIC20.62■□□□□ 0.89
Rsph3bQ9DA80 Adgrv1-211ENSMUST00000146749 1592 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
Rsph3bQ9DA80 Cyb561-201ENSMUST00000019734 2741 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Rsph3bQ9DA80 Ctf1-201ENSMUST00000047393 1352 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Rsph3bQ9DA80 Maff-202ENSMUST00000163691 1905 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Rsph3bQ9DA80 Jag1-201ENSMUST00000028735 5612 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Rsph3bQ9DA80 Rpl26-202ENSMUST00000101014 657 ntAPPRIS ALT1 TSL 5 BASIC20.61■□□□□ 0.89
Rsph3bQ9DA80 6430500D05Rik-201ENSMUST00000198286 1176 ntBASIC20.61■□□□□ 0.89
Rsph3bQ9DA80 1110004E09Rik-201ENSMUST00000023694 1143 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Rsph3bQ9DA80 Smad6-201ENSMUST00000041029 2971 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Rsph3bQ9DA80 Tmem121b-201ENSMUST00000178687 4869 ntAPPRIS P1 BASIC20.61■□□□□ 0.89
Rsph3bQ9DA80 Arid1b-201ENSMUST00000092723 7150 ntAPPRIS ALT2 TSL 5 BASIC20.61■□□□□ 0.89
Rsph3bQ9DA80 Igf2bp2-201ENSMUST00000100052 3899 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Rsph3bQ9DA80 Mpp6-201ENSMUST00000036225 1896 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
Rsph3bQ9DA80 Lmtk3-204ENSMUST00000209617 5051 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
Rsph3bQ9DA80 Cers2-201ENSMUST00000015858 2216 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Rsph3bQ9DA80 Flot2-203ENSMUST00000100784 2699 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
Rsph3bQ9DA80 Josd2-204ENSMUST00000118628 864 ntAPPRIS P1 TSL 2 BASIC20.6■□□□□ 0.89
Rsph3bQ9DA80 Vkorc1-202ENSMUST00000119922 387 ntTSL 3 BASIC20.6■□□□□ 0.89
Rsph3bQ9DA80 Gm26971-201ENSMUST00000182423 1072 ntBASIC20.6■□□□□ 0.89
Rsph3bQ9DA80 D130020L05Rik-202ENSMUST00000220889 769 ntTSL 3 BASIC20.6■□□□□ 0.89
Rsph3bQ9DA80 Tmem54-201ENSMUST00000030575 1064 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
Rsph3bQ9DA80 Josd2-201ENSMUST00000035844 930 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Rsph3bQ9DA80 Gm10065-201ENSMUST00000076238 345 ntAPPRIS P1 BASIC20.6■□□□□ 0.89
Rsph3bQ9DA80 Macrod2-202ENSMUST00000078027 1669 ntAPPRIS P2 TSL 5 BASIC20.6■□□□□ 0.89
Rsph3bQ9DA80 Wdr20-205ENSMUST00000193053 1351 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
Rsph3bQ9DA80 Fgfr2-217ENSMUST00000124096 2425 ntTSL 5 BASIC20.59■□□□□ 0.89
Rsph3bQ9DA80 Hoxc6-201ENSMUST00000001711 1581 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Rsph3bQ9DA80 Srxn1-201ENSMUST00000041500 2812 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Rsph3bQ9DA80 Cdo1-201ENSMUST00000035804 1530 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Retrieved 100 of 76,532 protein–RNA pairs in 73.8 ms