Protein–RNA interactions for Protein: Q9D9H3

Mbd3l1, Methyl-CpG-binding domain protein 3-like 1, mousemouse

Predictions only

Length 186 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Mbd3l1Q9D9H3 Nfib-204ENSMUST00000107246 3075 ntTSL 1 (best) BASIC16.39■□□□□ 0.22
Mbd3l1Q9D9H3 Ctcf-201ENSMUST00000005841 3782 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.22
Mbd3l1Q9D9H3 Tpm1-212ENSMUST00000113696 1714 ntTSL 2 BASIC16.39■□□□□ 0.21
Mbd3l1Q9D9H3 Naf1-201ENSMUST00000118009 2990 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Mbd3l1Q9D9H3 Fam104a-201ENSMUST00000120194 2619 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Mbd3l1Q9D9H3 Stox1-202ENSMUST00000133371 3510 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Mbd3l1Q9D9H3 Wnt11-205ENSMUST00000167303 1792 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Mbd3l1Q9D9H3 Dok6-201ENSMUST00000097495 1441 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Mbd3l1Q9D9H3 Nudt3-203ENSMUST00000114886 996 ntTSL 2 BASIC16.39■□□□□ 0.21
Mbd3l1Q9D9H3 Myo5a-214ENSMUST00000155282 6372 ntAPPRIS P5 TSL 5 BASIC16.39■□□□□ 0.21
Mbd3l1Q9D9H3 Apba1-201ENSMUST00000025830 6632 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Mbd3l1Q9D9H3 Fam172a-202ENSMUST00000099358 2242 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
Mbd3l1Q9D9H3 Gm11769-201ENSMUST00000140273 1657 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Mbd3l1Q9D9H3 Cyp2r1-207ENSMUST00000211506 1887 ntTSL 5 BASIC16.39■□□□□ 0.21
Mbd3l1Q9D9H3 Ncoa1-201ENSMUST00000085814 7329 ntAPPRIS P2 TSL 1 (best) BASIC16.39■□□□□ 0.21
Mbd3l1Q9D9H3 Zfp92-202ENSMUST00000086470 2050 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Mbd3l1Q9D9H3 Mettl24-201ENSMUST00000058747 1529 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Mbd3l1Q9D9H3 Nfatc2-201ENSMUST00000029057 2310 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Mbd3l1Q9D9H3 Scrib-202ENSMUST00000063747 5440 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
Mbd3l1Q9D9H3 Gmpr-201ENSMUST00000000260 1580 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Mbd3l1Q9D9H3 Chmp6-201ENSMUST00000026434 1557 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Mbd3l1Q9D9H3 Gm43213-201ENSMUST00000151866 1790 ntBASIC16.38■□□□□ 0.21
Mbd3l1Q9D9H3 Ddit4-201ENSMUST00000020308 1755 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Mbd3l1Q9D9H3 Negr1-202ENSMUST00000074015 4983 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Mbd3l1Q9D9H3 Zbtb22-201ENSMUST00000053429 2611 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Mbd3l1Q9D9H3 Dcaf5-201ENSMUST00000054145 5706 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Mbd3l1Q9D9H3 Gm28513-201ENSMUST00000191474 613 ntTSL 3 BASIC16.38■□□□□ 0.21
Mbd3l1Q9D9H3 Slc47a2-201ENSMUST00000093029 2377 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Mbd3l1Q9D9H3 Spata5l1-202ENSMUST00000152813 1526 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Mbd3l1Q9D9H3 Nelfb-201ENSMUST00000059849 2637 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Mbd3l1Q9D9H3 Tmem79-201ENSMUST00000001456 2406 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Mbd3l1Q9D9H3 Smim15-205ENSMUST00000225972 2097 ntAPPRIS P1 BASIC16.38■□□□□ 0.21
Mbd3l1Q9D9H3 Bean1-204ENSMUST00000171018 3386 ntAPPRIS P4 TSL 1 (best) BASIC16.37■□□□□ 0.21
Mbd3l1Q9D9H3 Hes1-201ENSMUST00000023171 1468 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Mbd3l1Q9D9H3 Camsap2-203ENSMUST00000192314 4916 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
Mbd3l1Q9D9H3 Gm43672-201ENSMUST00000199072 1731 ntBASIC16.37■□□□□ 0.21
Mbd3l1Q9D9H3 Gm29514-202ENSMUST00000186665 2214 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
Mbd3l1Q9D9H3 Nbl1-201ENSMUST00000042844 1793 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Mbd3l1Q9D9H3 Gm45855-201ENSMUST00000212546 880 ntBASIC16.37■□□□□ 0.21
Mbd3l1Q9D9H3 Mrps15-201ENSMUST00000030675 937 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Mbd3l1Q9D9H3 Il17re-201ENSMUST00000053569 1898 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
Mbd3l1Q9D9H3 Gm37352-201ENSMUST00000193908 2181 ntBASIC16.37■□□□□ 0.21
Mbd3l1Q9D9H3 Prr7-201ENSMUST00000046533 1359 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Mbd3l1Q9D9H3 Prkar2b-201ENSMUST00000003079 1657 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Mbd3l1Q9D9H3 Gm20100-201ENSMUST00000209418 2272 ntBASIC16.36■□□□□ 0.21
Mbd3l1Q9D9H3 Crlf2-203ENSMUST00000200284 1405 ntAPPRIS ALT2 TSL 1 (best) BASIC16.36■□□□□ 0.21
Mbd3l1Q9D9H3 Hoxa10-202ENSMUST00000125581 2565 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
Mbd3l1Q9D9H3 A530084C06Rik-201ENSMUST00000170573 3200 ntAPPRIS P1 BASIC16.36■□□□□ 0.21
Mbd3l1Q9D9H3 Tbc1d9-202ENSMUST00000093393 5334 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Mbd3l1Q9D9H3 Fcho2-208ENSMUST00000224992 2964 ntBASIC16.36■□□□□ 0.21
Mbd3l1Q9D9H3 Gm37194-201ENSMUST00000193092 3031 ntBASIC16.36■□□□□ 0.21
Mbd3l1Q9D9H3 Slc2a8-201ENSMUST00000028129 2108 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Mbd3l1Q9D9H3 Swsap1-201ENSMUST00000053583 1838 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Mbd3l1Q9D9H3 Raver2-201ENSMUST00000038463 4045 ntAPPRIS P2 TSL 1 (best) BASIC16.36■□□□□ 0.21
Mbd3l1Q9D9H3 Pigl-201ENSMUST00000014389 2174 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Mbd3l1Q9D9H3 Snrpe-202ENSMUST00000164574 597 ntTSL 3 BASIC16.36■□□□□ 0.21
Mbd3l1Q9D9H3 Ocel1-203ENSMUST00000110052 5285 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
Mbd3l1Q9D9H3 Zic1-201ENSMUST00000034927 5606 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Mbd3l1Q9D9H3 Slc11a1-201ENSMUST00000027368 2315 ntAPPRIS P2 TSL 1 (best) BASIC16.36■□□□□ 0.21
Mbd3l1Q9D9H3 Tle2-213ENSMUST00000146358 2749 ntAPPRIS P3 TSL 1 (best) BASIC16.36■□□□□ 0.21
Mbd3l1Q9D9H3 Gm572-201ENSMUST00000105698 1385 ntAPPRIS P1 TSL 5 BASIC16.36■□□□□ 0.21
Mbd3l1Q9D9H3 5330438I03Rik-201ENSMUST00000168347 2845 ntBASIC16.36■□□□□ 0.21
Mbd3l1Q9D9H3 Pard3-226ENSMUST00000162907 4682 ntAPPRIS ALT2 TSL 1 (best) BASIC16.36■□□□□ 0.21
Mbd3l1Q9D9H3 Slc2a13-202ENSMUST00000109283 6536 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Mbd3l1Q9D9H3 Csnk1g3-201ENSMUST00000069597 4394 ntAPPRIS P1 TSL 5 BASIC16.36■□□□□ 0.21
Mbd3l1Q9D9H3 Puf60-201ENSMUST00000002599 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
Mbd3l1Q9D9H3 Gnb2-201ENSMUST00000031726 1860 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Mbd3l1Q9D9H3 Zfp119b-201ENSMUST00000056147 1889 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Mbd3l1Q9D9H3 Hook1-202ENSMUST00000107083 1506 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
Mbd3l1Q9D9H3 Matk-202ENSMUST00000117488 1980 ntAPPRIS P3 TSL 1 (best) BASIC16.35■□□□□ 0.21
Mbd3l1Q9D9H3 Atp11a-201ENSMUST00000033818 7549 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
Mbd3l1Q9D9H3 Rpl31-203ENSMUST00000179954 630 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Mbd3l1Q9D9H3 Runx2os1-201ENSMUST00000097320 792 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
Mbd3l1Q9D9H3 Nrxn1-217ENSMUST00000174337 3021 ntTSL 5 BASIC16.35■□□□□ 0.21
Mbd3l1Q9D9H3 Nin-203ENSMUST00000095666 7183 ntAPPRIS ALT2 TSL 5 BASIC16.35■□□□□ 0.21
Mbd3l1Q9D9H3 Dtnb-222ENSMUST00000174479 3689 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
Mbd3l1Q9D9H3 Mpp6-201ENSMUST00000036225 1896 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
Mbd3l1Q9D9H3 Agfg1-206ENSMUST00000189220 8044 ntAPPRIS P2 TSL 1 (best) BASIC16.35■□□□□ 0.21
Mbd3l1Q9D9H3 Ociad2-202ENSMUST00000200776 2359 ntTSL 3 BASIC16.35■□□□□ 0.21
Mbd3l1Q9D9H3 Pick1-201ENSMUST00000018295 1977 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Mbd3l1Q9D9H3 Slc25a10-201ENSMUST00000026899 2023 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Mbd3l1Q9D9H3 Sik3-204ENSMUST00000126865 6287 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Mbd3l1Q9D9H3 Ncoa5-201ENSMUST00000040381 3179 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Mbd3l1Q9D9H3 Lysmd4-209ENSMUST00000208998 2110 ntAPPRIS P2 TSL 1 (best) BASIC16.34■□□□□ 0.21
Mbd3l1Q9D9H3 Sapcd2-203ENSMUST00000114293 1600 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
Mbd3l1Q9D9H3 Rasgrp2-224ENSMUST00000167240 2192 ntAPPRIS P1 TSL 5 BASIC16.34■□□□□ 0.21
Mbd3l1Q9D9H3 Dusp4-201ENSMUST00000033930 2740 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Mbd3l1Q9D9H3 G730003C15Rik-202ENSMUST00000189096 2309 ntBASIC16.34■□□□□ 0.21
Mbd3l1Q9D9H3 Ptp4a2-201ENSMUST00000030578 3646 ntAPPRIS P1 TSL 5 BASIC16.34■□□□□ 0.21
Mbd3l1Q9D9H3 Rmnd1-201ENSMUST00000042251 3139 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Mbd3l1Q9D9H3 Dexi-203ENSMUST00000184863 2537 ntAPPRIS P1 TSL 2 BASIC16.34■□□□□ 0.21
Mbd3l1Q9D9H3 D16Ertd472e-201ENSMUST00000114218 1271 ntAPPRIS P1 TSL 5 BASIC16.34■□□□□ 0.21
Mbd3l1Q9D9H3 Tbxas1-201ENSMUST00000003017 1990 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Mbd3l1Q9D9H3 Shroom4-202ENSMUST00000103005 4839 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Mbd3l1Q9D9H3 9330160F10Rik-201ENSMUST00000101007 2766 ntBASIC16.34■□□□□ 0.21
Mbd3l1Q9D9H3 Crebl2-201ENSMUST00000046303 3629 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Mbd3l1Q9D9H3 Ovol2-201ENSMUST00000037423 1539 ntAPPRIS P4 TSL 1 (best) BASIC16.34■□□□□ 0.21
Mbd3l1Q9D9H3 Cpox-201ENSMUST00000060077 3186 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Mbd3l1Q9D9H3 Col11a2-203ENSMUST00000114255 5722 ntAPPRIS ALT2 TSL 5 BASIC16.34■□□□□ 0.21
Mbd3l1Q9D9H3 Irgc1-204ENSMUST00000205776 1835 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
Retrieved 100 of 76,532 protein–RNA pairs in 19.7 ms