Protein–RNA interactions for Protein: Q62059

Vcan, Versican core protein, mousemouse

Predictions only

Length 3,357 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VcanQ62059 Gm29458-201ENSMUST00000187093 354 ntTSL 3 BASIC17.97■□□□□ 0.47
VcanQ62059 2310039H08Rik-201ENSMUST00000071430 773 ntAPPRIS P1 BASIC17.97■□□□□ 0.47
VcanQ62059 Picalm-205ENSMUST00000207225 3489 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
VcanQ62059 Srxn1-201ENSMUST00000041500 2812 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
VcanQ62059 Dync1i1-203ENSMUST00000115556 2718 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
VcanQ62059 Bax-201ENSMUST00000033093 867 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
VcanQ62059 Hist3h2ba-201ENSMUST00000078267 614 ntAPPRIS P1 BASIC17.97■□□□□ 0.47
VcanQ62059 Tmem80-206ENSMUST00000133012 1524 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
VcanQ62059 Fam207a-201ENSMUST00000045454 2394 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
VcanQ62059 Gimap1-201ENSMUST00000054368 1493 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
VcanQ62059 Zfp524-203ENSMUST00000209030 1128 ntAPPRIS P1 TSL 5 BASIC17.96■□□□□ 0.47
VcanQ62059 Pomgnt1-203ENSMUST00000106498 2719 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
VcanQ62059 K230010J24Rik-204ENSMUST00000187868 1810 ntAPPRIS P1 TSL 5 BASIC17.96■□□□□ 0.47
VcanQ62059 Lrg1-201ENSMUST00000041357 1351 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
VcanQ62059 Dalrd3-201ENSMUST00000019183 1746 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
VcanQ62059 Eif4e2-205ENSMUST00000113232 1125 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
VcanQ62059 Wdr74-202ENSMUST00000210512 1078 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
VcanQ62059 Gm9803-201ENSMUST00000057649 563 ntAPPRIS P1 BASIC17.96■□□□□ 0.47
VcanQ62059 Gm21814-202ENSMUST00000203277 873 ntBASIC17.96■□□□□ 0.46
VcanQ62059 Gm32031-203ENSMUST00000208993 649 ntTSL 2 BASIC17.96■□□□□ 0.46
VcanQ62059 Slc35b3-209ENSMUST00000225432 2216 ntAPPRIS P3 BASIC17.95■□□□□ 0.46
VcanQ62059 Fip1l1-202ENSMUST00000113534 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
VcanQ62059 Gm13441-201ENSMUST00000140104 1168 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
VcanQ62059 Gm12781-201ENSMUST00000146269 395 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
VcanQ62059 AC154471.1-201ENSMUST00000224418 436 ntBASIC17.95■□□□□ 0.46
VcanQ62059 AC130713.1-201ENSMUST00000228853 1096 ntBASIC17.95■□□□□ 0.46
VcanQ62059 AC122428.2-201ENSMUST00000216321 1832 ntBASIC17.95■□□□□ 0.46
VcanQ62059 K230015D01Rik-201ENSMUST00000211969 1516 ntBASIC17.95■□□□□ 0.46
VcanQ62059 Smkr-ps-202ENSMUST00000141679 901 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
VcanQ62059 Gfer-201ENSMUST00000046839 1775 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
VcanQ62059 Pgam5-201ENSMUST00000059229 2044 ntAPPRIS P3 TSL 1 (best) BASIC17.95■□□□□ 0.46
VcanQ62059 Tor2a-201ENSMUST00000009707 1536 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
VcanQ62059 Atoh8-201ENSMUST00000042646 2355 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
VcanQ62059 Sdhaf1-201ENSMUST00000098586 2490 ntAPPRIS P1 BASIC17.95■□□□□ 0.46
VcanQ62059 Vim-206ENSMUST00000193675 1777 ntAPPRIS ALT2 TSL 5 BASIC17.95■□□□□ 0.46
VcanQ62059 Vegfa-207ENSMUST00000142351 1973 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
VcanQ62059 Gab2-202ENSMUST00000206791 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
VcanQ62059 Hoxa5-201ENSMUST00000048794 1877 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
VcanQ62059 Sdr39u1-201ENSMUST00000111325 1255 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
VcanQ62059 Asph-217ENSMUST00000146441 2576 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
VcanQ62059 Slc12a8-204ENSMUST00000121925 2656 ntAPPRIS P2 TSL 5 BASIC17.94■□□□□ 0.46
VcanQ62059 Gm10013-201ENSMUST00000106074 672 ntBASIC17.94■□□□□ 0.46
VcanQ62059 Gm45121-201ENSMUST00000205396 1153 ntTSL 5 BASIC17.94■□□□□ 0.46
VcanQ62059 Nat8f3-202ENSMUST00000168531 1347 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
VcanQ62059 Matr3-209ENSMUST00000188275 1951 ntTSL 5 BASIC17.94■□□□□ 0.46
VcanQ62059 Ctdsp1-201ENSMUST00000027367 2876 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
VcanQ62059 Bpifa3-202ENSMUST00000109746 1102 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
VcanQ62059 Pgam1-ps2-201ENSMUST00000117129 765 ntBASIC17.93■□□□□ 0.46
VcanQ62059 Gm28793-201ENSMUST00000190845 413 ntTSL 5 BASIC17.93■□□□□ 0.46
VcanQ62059 Ergic3-202ENSMUST00000088650 1349 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
VcanQ62059 Kmt5b-216ENSMUST00000176926 1551 ntAPPRIS ALT2 TSL 5 BASIC17.93■□□□□ 0.46
VcanQ62059 AA414768-201ENSMUST00000121924 1257 ntBASIC17.93■□□□□ 0.46
VcanQ62059 Mum1-201ENSMUST00000020365 2640 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
VcanQ62059 Trim9-208ENSMUST00000221370 2393 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
VcanQ62059 Tlcd2-202ENSMUST00000108435 1112 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
VcanQ62059 Fev-202ENSMUST00000159232 928 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
VcanQ62059 Idnk-201ENSMUST00000051490 764 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
VcanQ62059 March11-202ENSMUST00000140840 1558 ntAPPRIS P3 TSL 2 BASIC17.92■□□□□ 0.46
VcanQ62059 Ccr10-201ENSMUST00000062759 1726 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
VcanQ62059 1810010H24Rik-201ENSMUST00000106767 1100 ntAPPRIS P2 TSL 2 BASIC17.92■□□□□ 0.46
VcanQ62059 Gm5475-201ENSMUST00000132119 2608 ntAPPRIS P5 TSL 1 (best) BASIC17.92■□□□□ 0.46
VcanQ62059 Lyzl4-202ENSMUST00000120918 959 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
VcanQ62059 Sct-202ENSMUST00000167790 507 ntAPPRIS P3 TSL 1 (best) BASIC17.92■□□□□ 0.46
VcanQ62059 Lmbr1-207ENSMUST00000200564 1598 ntTSL 5 BASIC17.92■□□□□ 0.46
VcanQ62059 Ube2b-201ENSMUST00000020657 1792 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
VcanQ62059 Sct-201ENSMUST00000046156 534 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
VcanQ62059 Ccnjl-201ENSMUST00000050574 2672 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
VcanQ62059 Trp73os-201ENSMUST00000143429 2192 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
VcanQ62059 Dpysl3-201ENSMUST00000025379 2106 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
VcanQ62059 Cntfr-203ENSMUST00000102961 1995 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
VcanQ62059 Tspan4-201ENSMUST00000026585 1466 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
VcanQ62059 Rpl14-201ENSMUST00000165532 1009 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
VcanQ62059 Ube2t-201ENSMUST00000027687 1116 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
VcanQ62059 Zfp710-204ENSMUST00000206039 2194 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
VcanQ62059 Rhbdd3-201ENSMUST00000036320 1790 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
VcanQ62059 Nhlh1-201ENSMUST00000059794 2464 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
VcanQ62059 Neto2-205ENSMUST00000216286 2932 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
VcanQ62059 Smim22-201ENSMUST00000178155 429 ntAPPRIS P3 TSL 1 (best) BASIC17.91■□□□□ 0.46
VcanQ62059 AC163280.1-201ENSMUST00000228194 1100 ntBASIC17.91■□□□□ 0.46
VcanQ62059 Zfp467-202ENSMUST00000114556 2287 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
VcanQ62059 Kdm1a-203ENSMUST00000116273 3008 ntAPPRIS P3 TSL 1 (best) BASIC17.91■□□□□ 0.46
VcanQ62059 Arhgef4-208ENSMUST00000211073 171 ntBASIC17.91■□□□□ 0.46
VcanQ62059 Sephs2-201ENSMUST00000082428 2177 ntAPPRIS P1 BASIC17.9■□□□□ 0.46
VcanQ62059 Pou2f2-204ENSMUST00000108416 1754 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
VcanQ62059 Cklf-208ENSMUST00000212433 1304 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
VcanQ62059 Pabpn1-205ENSMUST00000141446 912 ntAPPRIS ALT2 TSL 3 BASIC17.9■□□□□ 0.46
VcanQ62059 Stoml2-201ENSMUST00000030169 1874 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
VcanQ62059 Nipsnap2-201ENSMUST00000086046 2112 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
VcanQ62059 Tcf7-202ENSMUST00000109071 1742 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
VcanQ62059 Trim54-201ENSMUST00000013771 1434 ntAPPRIS P2 TSL 1 (best) BASIC17.9■□□□□ 0.46
VcanQ62059 Pacsin2-201ENSMUST00000056177 2795 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
VcanQ62059 Mocs1-202ENSMUST00000165390 729 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
VcanQ62059 Gm12504-201ENSMUST00000120860 2231 ntBASIC17.9■□□□□ 0.46
VcanQ62059 Gm6802-201ENSMUST00000167843 1983 ntBASIC17.9■□□□□ 0.46
VcanQ62059 Maf1-211ENSMUST00000161527 1743 ntAPPRIS P2 TSL 5 BASIC17.9■□□□□ 0.46
VcanQ62059 Mapkapk2-201ENSMUST00000016672 2854 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
VcanQ62059 Mbp-208ENSMUST00000114676 1685 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
VcanQ62059 Rpp25l-201ENSMUST00000038434 856 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
VcanQ62059 Nthl1-201ENSMUST00000047611 1080 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
VcanQ62059 Ubl3-201ENSMUST00000079324 2537 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Retrieved 100 of 76,532 protein–RNA pairs in 30 ms