Protein–RNA interactions for Protein: Q3U435

Mmp25, Matrix metalloproteinase-25, mousemouse

Predictions only

Length 615 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Mmp25Q3U435 Cnn3-201ENSMUST00000029773 2049 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Mmp25Q3U435 Khdc3-201ENSMUST00000034737 1681 ntAPPRIS P3 TSL 1 (best) BASIC17.77■□□□□ 0.44
Mmp25Q3U435 Agfg1-202ENSMUST00000113444 3142 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
Mmp25Q3U435 Nlgn2-201ENSMUST00000056484 5003 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Mmp25Q3U435 Gorasp2-203ENSMUST00000112205 1196 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.44
Mmp25Q3U435 Gm44899-202ENSMUST00000209433 511 ntTSL 5 BASIC17.77■□□□□ 0.44
Mmp25Q3U435 Mcrip2-201ENSMUST00000026828 816 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Mmp25Q3U435 Dnaja4-201ENSMUST00000070070 3003 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Mmp25Q3U435 Kirrel-201ENSMUST00000041732 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.43
Mmp25Q3U435 Gm43545-201ENSMUST00000196765 2779 ntBASIC17.77■□□□□ 0.43
Mmp25Q3U435 Nexmif-201ENSMUST00000056502 5211 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.43
Mmp25Q3U435 Smc6-201ENSMUST00000020931 5603 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
Mmp25Q3U435 Baiap2l2-201ENSMUST00000165408 2100 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
Mmp25Q3U435 Hoxa10-202ENSMUST00000125581 2565 ntTSL 1 (best) BASIC17.77■□□□□ 0.43
Mmp25Q3U435 Hs3st4-201ENSMUST00000106437 3189 ntAPPRIS P1 TSL 3 BASIC17.77■□□□□ 0.43
Mmp25Q3U435 Rapgef1-203ENSMUST00000102872 6402 ntAPPRIS P3 TSL 1 (best) BASIC17.76■□□□□ 0.43
Mmp25Q3U435 Arid3c-204ENSMUST00000171251 1751 ntAPPRIS P3 TSL 5 BASIC17.76■□□□□ 0.43
Mmp25Q3U435 Dvl3-203ENSMUST00000171572 2493 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Mmp25Q3U435 Rchy1-204ENSMUST00000169948 1417 ntTSL 3 BASIC17.76■□□□□ 0.43
Mmp25Q3U435 Acot5-202ENSMUST00000072505 1401 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Mmp25Q3U435 Gm11627-201ENSMUST00000107080 585 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Mmp25Q3U435 Gm15155-201ENSMUST00000112542 1009 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Mmp25Q3U435 Zbtb7c-202ENSMUST00000167921 2147 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Mmp25Q3U435 Gm6420-201ENSMUST00000193885 723 ntBASIC17.76■□□□□ 0.43
Mmp25Q3U435 Snrpc-201ENSMUST00000071006 870 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Mmp25Q3U435 Chrac1-201ENSMUST00000089765 871 ntAPPRIS P2 TSL 1 (best) BASIC17.76■□□□□ 0.43
Mmp25Q3U435 Lmtk3-204ENSMUST00000209617 5051 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
Mmp25Q3U435 Wdr37-203ENSMUST00000164183 1780 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Mmp25Q3U435 Eid2b-201ENSMUST00000094651 1751 ntAPPRIS P1 BASIC17.76■□□□□ 0.43
Mmp25Q3U435 Stx4a-201ENSMUST00000033075 1456 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Mmp25Q3U435 Yeats4-201ENSMUST00000020382 1327 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Mmp25Q3U435 Myd88-201ENSMUST00000035092 1960 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Mmp25Q3U435 AC126028.2-201ENSMUST00000228100 1833 ntBASIC17.75■□□□□ 0.43
Mmp25Q3U435 Mgarp-202ENSMUST00000108046 1409 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Mmp25Q3U435 Wnt16-201ENSMUST00000031681 1663 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Mmp25Q3U435 Plin1-201ENSMUST00000032762 1916 ntAPPRIS P1 TSL 5 BASIC17.75■□□□□ 0.43
Mmp25Q3U435 Gm15908-201ENSMUST00000154345 1091 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Mmp25Q3U435 Gm37179-201ENSMUST00000194862 823 ntBASIC17.75■□□□□ 0.43
Mmp25Q3U435 Gm44238-201ENSMUST00000203300 353 ntTSL 3 BASIC17.75■□□□□ 0.43
Mmp25Q3U435 4930413G21Rik-201ENSMUST00000205998 993 ntBASIC17.75■□□□□ 0.43
Mmp25Q3U435 Wasl-202ENSMUST00000041737 1298 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Mmp25Q3U435 Pop5-201ENSMUST00000081497 1025 ntAPPRIS P1 TSL 5 BASIC17.75■□□□□ 0.43
Mmp25Q3U435 Hmx2-202ENSMUST00000183219 1546 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Mmp25Q3U435 Fam53a-202ENSMUST00000065119 2009 ntAPPRIS P2 TSL 1 (best) BASIC17.75■□□□□ 0.43
Mmp25Q3U435 Trim72-202ENSMUST00000106248 2134 ntAPPRIS P1 TSL 5 BASIC17.75■□□□□ 0.43
Mmp25Q3U435 Gfi1-203ENSMUST00000159164 2648 ntAPPRIS P3 TSL 1 (best) BASIC17.75■□□□□ 0.43
Mmp25Q3U435 Cpne7-201ENSMUST00000037900 2398 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Mmp25Q3U435 Nrm-201ENSMUST00000074259 1466 ntAPPRIS P2 TSL 1 (best) BASIC17.75■□□□□ 0.43
Mmp25Q3U435 Mgat1-213ENSMUST00000167400 3151 ntAPPRIS P1 TSL 5 BASIC17.75■□□□□ 0.43
Mmp25Q3U435 Ppm1m-203ENSMUST00000140761 1846 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Mmp25Q3U435 Dap3-201ENSMUST00000090938 4760 ntAPPRIS P2 TSL 1 (best) BASIC17.74■□□□□ 0.43
Mmp25Q3U435 Plekhh1-201ENSMUST00000039928 6439 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Mmp25Q3U435 Oxct2a-201ENSMUST00000102640 1760 ntAPPRIS P1 BASIC17.74■□□□□ 0.43
Mmp25Q3U435 Cdo1-201ENSMUST00000035804 1530 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Mmp25Q3U435 Ppm1n-201ENSMUST00000032560 1648 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Mmp25Q3U435 Tmem234-215ENSMUST00000173758 453 ntTSL 2 BASIC17.74■□□□□ 0.43
Mmp25Q3U435 Mpig6b-202ENSMUST00000174190 729 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Mmp25Q3U435 Gm26571-205ENSMUST00000223215 591 ntTSL 3 BASIC17.74■□□□□ 0.43
Mmp25Q3U435 Cystm1-201ENSMUST00000050584 831 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
Mmp25Q3U435 E4f1-205ENSMUST00000226941 2642 ntAPPRIS ALT2 BASIC17.74■□□□□ 0.43
Mmp25Q3U435 Arhgap44-202ENSMUST00000093001 2256 ntTSL 2 BASIC17.74■□□□□ 0.43
Mmp25Q3U435 Chtf8-201ENSMUST00000169312 2730 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Mmp25Q3U435 Aen-202ENSMUST00000107423 2230 ntAPPRIS P3 TSL 5 BASIC17.74■□□□□ 0.43
Mmp25Q3U435 Gas2l1-203ENSMUST00000109895 2530 ntAPPRIS P3 TSL 1 (best) BASIC17.73■□□□□ 0.43
Mmp25Q3U435 Fgfr1-215ENSMUST00000179592 5041 ntTSL 5 BASIC17.73■□□□□ 0.43
Mmp25Q3U435 Cyp4f15-201ENSMUST00000008801 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
Mmp25Q3U435 Krt87-201ENSMUST00000081945 1826 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Mmp25Q3U435 Nespas-201ENSMUST00000143738 1083 ntBASIC17.73■□□□□ 0.43
Mmp25Q3U435 Gm9780-201ENSMUST00000184272 350 ntTSL 2 BASIC17.73■□□□□ 0.43
Mmp25Q3U435 Vax2-201ENSMUST00000037807 1242 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Mmp25Q3U435 Gm9970-201ENSMUST00000068997 558 ntAPPRIS P1 BASIC17.73■□□□□ 0.43
Mmp25Q3U435 Fcrlb-201ENSMUST00000094337 1284 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Mmp25Q3U435 Mdfi-201ENSMUST00000035375 1371 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Mmp25Q3U435 Hoxc6-201ENSMUST00000001711 1581 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Mmp25Q3U435 Zfp777-202ENSMUST00000114583 3111 ntAPPRIS P3 TSL 5 BASIC17.73■□□□□ 0.43
Mmp25Q3U435 Wdr41-202ENSMUST00000159647 2289 ntTSL 5 BASIC17.73■□□□□ 0.43
Mmp25Q3U435 Wdr41-206ENSMUST00000167155 2289 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Mmp25Q3U435 Hnrnpd-211ENSMUST00000172361 6811 ntAPPRIS P4 TSL 1 (best) BASIC17.73■□□□□ 0.43
Mmp25Q3U435 Cbx6-203ENSMUST00000109627 5806 ntAPPRIS P2 TSL 1 (best) BASIC17.73■□□□□ 0.43
Mmp25Q3U435 Sptssa-201ENSMUST00000056228 1346 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Mmp25Q3U435 1700065D16Rik-204ENSMUST00000189348 1540 ntTSL 2 BASIC17.72■□□□□ 0.43
Mmp25Q3U435 Nt5c3b-204ENSMUST00000107398 1635 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Mmp25Q3U435 Cbfb-202ENSMUST00000109392 2891 ntAPPRIS ALT1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Mmp25Q3U435 Nhlh1-201ENSMUST00000059794 2464 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Mmp25Q3U435 H2afx-201ENSMUST00000052686 1384 ntAPPRIS P1 BASIC17.72■□□□□ 0.43
Mmp25Q3U435 Gm8773-201ENSMUST00000101627 1268 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Mmp25Q3U435 Nfe2l3-203ENSMUST00000160133 1125 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Mmp25Q3U435 Foxi3-202ENSMUST00000163089 1278 ntAPPRIS ALT2 TSL 5 BASIC17.72■□□□□ 0.43
Mmp25Q3U435 Foxk1-202ENSMUST00000198422 687 ntTSL 3 BASIC17.72■□□□□ 0.43
Mmp25Q3U435 Foxi3-201ENSMUST00000069634 1206 ntAPPRIS P2 TSL 5 BASIC17.72■□□□□ 0.43
Mmp25Q3U435 Slc35d3-201ENSMUST00000059805 2630 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Mmp25Q3U435 1700028E10Rik-201ENSMUST00000181114 2034 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Mmp25Q3U435 Impdh2-201ENSMUST00000081111 1858 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Mmp25Q3U435 Fbxo44-201ENSMUST00000057907 1829 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Mmp25Q3U435 Gm26971-201ENSMUST00000182423 1072 ntBASIC17.71■□□□□ 0.43
Mmp25Q3U435 Ypel3-201ENSMUST00000038614 973 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Mmp25Q3U435 H19-202ENSMUST00000136359 2286 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
Mmp25Q3U435 Gnas-208ENSMUST00000109087 1716 ntAPPRIS P4 TSL 1 (best) BASIC17.71■□□□□ 0.43
Mmp25Q3U435 Smarcd3-208ENSMUST00000195943 1712 ntTSL 5 BASIC17.71■□□□□ 0.43
Mmp25Q3U435 Coq10b-201ENSMUST00000027125 1733 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
Retrieved 100 of 76,532 protein–RNA pairs in 26.8 ms