Protein–RNA interactions for Protein: O08983

Hps1, Hermansky-Pudlak syndrome 1 protein homolog, mousemouse

Predictions only

Length 704 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hps1O08983 Kctd17-201ENSMUST00000089414 1180 ntAPPRIS ALT2 TSL 5 BASIC17.44■□□□□ 0.38
Hps1O08983 Acvrl1-206ENSMUST00000121718 1906 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Hps1O08983 Dnajb11-201ENSMUST00000004574 1927 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Hps1O08983 Zbtb7a-204ENSMUST00000121840 1676 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Hps1O08983 Ulk1-201ENSMUST00000031490 5213 ntAPPRIS P3 TSL 1 (best) BASIC17.44■□□□□ 0.38
Hps1O08983 Tmem250-ps-201ENSMUST00000133808 2483 ntTSL 2 BASIC17.43■□□□□ 0.38
Hps1O08983 Ttyh3-202ENSMUST00000197452 4576 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Hps1O08983 Nfe2-201ENSMUST00000075192 1697 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Hps1O08983 Kcnn4-201ENSMUST00000171904 1990 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Hps1O08983 Taf3-203ENSMUST00000114907 695 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Hps1O08983 4930444P10Rik-203ENSMUST00000151004 1001 ntAPPRIS P2 TSL 3 BASIC17.43■□□□□ 0.38
Hps1O08983 Fam168b-208ENSMUST00000191307 844 ntTSL 2 BASIC17.43■□□□□ 0.38
Hps1O08983 Med31-201ENSMUST00000021157 1161 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Hps1O08983 Anapc5-218ENSMUST00000200645 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
Hps1O08983 AW047730-202ENSMUST00000181406 2579 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Hps1O08983 Map2k2-202ENSMUST00000105331 1556 ntAPPRIS ALT1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Hps1O08983 Msantd3-203ENSMUST00000107704 1597 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Hps1O08983 Creb1-204ENSMUST00000185594 1569 ntAPPRIS P1 TSL 5 BASIC17.43■□□□□ 0.38
Hps1O08983 Xkr4-201ENSMUST00000070533 3634 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Hps1O08983 Dlgap2-203ENSMUST00000133298 4503 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
Hps1O08983 Sfmbt2-204ENSMUST00000114864 1901 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Hps1O08983 Cdkn3-203ENSMUST00000227149 1952 ntBASIC17.42■□□□□ 0.38
Hps1O08983 Spint2-201ENSMUST00000098604 1384 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Hps1O08983 Six3-203ENSMUST00000176081 3680 ntAPPRIS P2 TSL 1 (best) BASIC17.42■□□□□ 0.38
Hps1O08983 Sstr1-201ENSMUST00000044299 2014 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Hps1O08983 Gm4969-202ENSMUST00000141380 1892 ntAPPRIS P1 TSL 5 BASIC17.42■□□□□ 0.38
Hps1O08983 Gm20421-201ENSMUST00000153344 672 ntTSL 3 BASIC17.42■□□□□ 0.38
Hps1O08983 Prr3-204ENSMUST00000172900 439 ntTSL 2 BASIC17.42■□□□□ 0.38
Hps1O08983 Msx1-201ENSMUST00000063116 1935 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Hps1O08983 Rell2-212ENSMUST00000177058 1762 ntAPPRIS P1 TSL 5 BASIC17.42■□□□□ 0.38
Hps1O08983 Cask-203ENSMUST00000115436 8260 ntAPPRIS P1 TSL 2 BASIC17.42■□□□□ 0.38
Hps1O08983 Mtus2-205ENSMUST00000110515 1792 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Hps1O08983 Hexa-201ENSMUST00000026262 1996 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Hps1O08983 Dleu2-211ENSMUST00000183066 788 ntTSL 3 BASIC17.41■□□□□ 0.38
Hps1O08983 Trnau1ap-201ENSMUST00000030730 1130 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Hps1O08983 Negr1-202ENSMUST00000074015 4983 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Hps1O08983 Slain2-201ENSMUST00000143829 4828 ntTSL 5 BASIC17.41■□□□□ 0.38
Hps1O08983 Anapc5-205ENSMUST00000197074 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
Hps1O08983 Anapc5-212ENSMUST00000199406 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
Hps1O08983 Stoml2-201ENSMUST00000030169 1874 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Hps1O08983 Dusp28-201ENSMUST00000060913 1314 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Hps1O08983 Atp6v0a2-201ENSMUST00000037865 5345 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Hps1O08983 Nhlh1-201ENSMUST00000059794 2464 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Hps1O08983 Bicdl2-201ENSMUST00000062967 1913 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Hps1O08983 Lfng-201ENSMUST00000031555 2305 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Hps1O08983 Nabp2-202ENSMUST00000164199 1371 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Hps1O08983 Slc35a2-209ENSMUST00000208397 1374 ntAPPRIS ALT2 TSL 5 BASIC17.4■□□□□ 0.38
Hps1O08983 Man1c1-202ENSMUST00000054096 4715 ntAPPRIS P1 TSL 5 BASIC17.4■□□□□ 0.38
Hps1O08983 Sik3-204ENSMUST00000126865 6287 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Hps1O08983 Dock3-201ENSMUST00000044532 9063 ntAPPRIS P1 TSL 2 BASIC17.4■□□□□ 0.38
Hps1O08983 Wnt10a-201ENSMUST00000006718 2468 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Hps1O08983 Slc25a3-203ENSMUST00000164505 1483 ntAPPRIS P2 TSL 5 BASIC17.4■□□□□ 0.38
Hps1O08983 Gm43530-201ENSMUST00000195920 274 ntBASIC17.4■□□□□ 0.38
Hps1O08983 Ppp2r2c-203ENSMUST00000201156 461 ntTSL 5 BASIC17.4■□□□□ 0.38
Hps1O08983 Serbp1-212ENSMUST00000204294 717 ntTSL 5 BASIC17.4■□□□□ 0.38
Hps1O08983 Gm36033-202ENSMUST00000214827 745 ntTSL 2 BASIC17.4■□□□□ 0.38
Hps1O08983 Rnf187-202ENSMUST00000217262 711 ntAPPRIS P2 TSL 1 (best) BASIC17.4■□□□□ 0.38
Hps1O08983 Shq1-202ENSMUST00000113312 6816 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Hps1O08983 Cacna1c-216ENSMUST00000188522 7338 ntAPPRIS ALT2 TSL 5 BASIC17.4■□□□□ 0.38
Hps1O08983 Gm15645-201ENSMUST00000131504 2208 ntTSL 5 BASIC17.4■□□□□ 0.38
Hps1O08983 Rab34-202ENSMUST00000056241 1558 ntTSL 5 BASIC17.4■□□□□ 0.38
Hps1O08983 Pold2-201ENSMUST00000102922 1646 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.38
Hps1O08983 Lefty1-201ENSMUST00000037361 1620 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.38
Hps1O08983 Zfp692-202ENSMUST00000153510 1887 ntAPPRIS P1 TSL 5 BASIC17.39■□□□□ 0.38
Hps1O08983 Alyref-201ENSMUST00000026125 3527 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.38
Hps1O08983 Ankrd9-207ENSMUST00000148765 1431 ntAPPRIS P2 TSL 2 BASIC17.39■□□□□ 0.38
Hps1O08983 Igdcc4-205ENSMUST00000213533 6220 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
Hps1O08983 Igdcc4-201ENSMUST00000035499 6223 ntAPPRIS P2 TSL 1 (best) BASIC17.39■□□□□ 0.37
Hps1O08983 Tk2-201ENSMUST00000050211 2406 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Hps1O08983 Ermp1-203ENSMUST00000159692 7058 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Hps1O08983 Rasl10b-202ENSMUST00000108140 3156 ntAPPRIS P1 TSL 2 BASIC17.39■□□□□ 0.37
Hps1O08983 Gm26682-201ENSMUST00000180850 1729 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Hps1O08983 Rbm33-204ENSMUST00000114884 6256 ntAPPRIS ALT2 TSL 5 BASIC17.39■□□□□ 0.37
Hps1O08983 Sarnp-201ENSMUST00000105230 918 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Hps1O08983 Stmn4-203ENSMUST00000120229 1281 ntTSL 2 BASIC17.39■□□□□ 0.37
Hps1O08983 Tcte2-209ENSMUST00000143162 1221 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
Hps1O08983 Itgb5-202ENSMUST00000115028 3090 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Hps1O08983 Bcl11b-203ENSMUST00000109891 2888 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
Hps1O08983 Bag1-202ENSMUST00000108089 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
Hps1O08983 Srcin1-203ENSMUST00000107596 7054 ntAPPRIS P2 TSL 1 (best) BASIC17.39■□□□□ 0.37
Hps1O08983 Rab40c-207ENSMUST00000167626 2506 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Hps1O08983 Exoc3l2-202ENSMUST00000137613 4016 ntAPPRIS P1 TSL 5 BASIC17.38■□□□□ 0.37
Hps1O08983 Mink1-205ENSMUST00000102559 4865 ntAPPRIS P4 TSL 1 (best) BASIC17.38■□□□□ 0.37
Hps1O08983 Csnk1a1-207ENSMUST00000166990 1860 ntTSL 5 BASIC17.38■□□□□ 0.37
Hps1O08983 Gas2-203ENSMUST00000107591 2232 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Hps1O08983 Gltpd2-201ENSMUST00000057685 1216 ntAPPRIS P2 TSL 1 (best) BASIC17.38■□□□□ 0.37
Hps1O08983 Ahcyl2-202ENSMUST00000102995 5155 ntAPPRIS ALT1 TSL 5 BASIC17.38■□□□□ 0.37
Hps1O08983 Fgfr2-211ENSMUST00000120187 4311 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
Hps1O08983 Dpy19l1-203ENSMUST00000142064 3489 ntAPPRIS P1 TSL 5 BASIC17.37■□□□□ 0.37
Hps1O08983 Amfr-201ENSMUST00000053766 3880 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Hps1O08983 Gas2l1-203ENSMUST00000109895 2530 ntAPPRIS P3 TSL 1 (best) BASIC17.37■□□□□ 0.37
Hps1O08983 Cadm1-201ENSMUST00000034581 1254 ntAPPRIS ALT1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Hps1O08983 Zfp653-201ENSMUST00000043922 2108 ntAPPRIS P3 TSL 1 (best) BASIC17.37■□□□□ 0.37
Hps1O08983 Gm5576-201ENSMUST00000075809 1236 ntBASIC17.37■□□□□ 0.37
Hps1O08983 Sbf1-205ENSMUST00000144585 6165 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
Hps1O08983 Cdc20-201ENSMUST00000006565 1793 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Hps1O08983 Tmed10-201ENSMUST00000040766 1482 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Hps1O08983 Barx2-201ENSMUST00000116615 1968 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Hps1O08983 Stk11-201ENSMUST00000003152 2566 ntAPPRIS P3 TSL 1 (best) BASIC17.36■□□□□ 0.37
Hps1O08983 Gsk3b-201ENSMUST00000023507 8303 ntAPPRIS P3 TSL 1 (best) BASIC17.36■□□□□ 0.37
Retrieved 100 of 76,532 protein–RNA pairs in 20.8 ms