Protein–RNA interactions for Protein: Q9JJK5

Herpud1, Homocysteine-responsive endoplasmic reticulum-resident ubiquitin-like domain member 1 protein, mousemouse

Predictions only

Length 391 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Herpud1Q9JJK5 Ppp2r1b-209ENSMUST00000176349 1890 ntAPPRIS ALT2 TSL 5 BASIC15.73■□□□□ 0.11
Herpud1Q9JJK5 Slc11a1-211ENSMUST00000187516 1893 ntAPPRIS ALT2 TSL 5 BASIC15.73■□□□□ 0.11
Herpud1Q9JJK5 Nags-201ENSMUST00000055409 2028 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Herpud1Q9JJK5 4921536K21Rik-201ENSMUST00000020712 2590 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Herpud1Q9JJK5 Srp68-201ENSMUST00000021133 2526 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Herpud1Q9JJK5 Krtap5-2-202ENSMUST00000190456 1471 ntAPPRIS P2 BASIC15.72■□□□□ 0.11
Herpud1Q9JJK5 Gm5784-201ENSMUST00000179344 2478 ntBASIC15.72■□□□□ 0.11
Herpud1Q9JJK5 Osbpl1a-203ENSMUST00000118313 2893 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
Herpud1Q9JJK5 Gmpr-201ENSMUST00000000260 1580 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Herpud1Q9JJK5 Rps2-ps10-202ENSMUST00000170335 965 ntBASIC15.72■□□□□ 0.11
Herpud1Q9JJK5 Bsg-205ENSMUST00000179781 1261 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
Herpud1Q9JJK5 1700064M15Rik-201ENSMUST00000185726 645 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
Herpud1Q9JJK5 AC158777.2-201ENSMUST00000228787 398 ntAPPRIS P1 BASIC15.72■□□□□ 0.11
Herpud1Q9JJK5 Tesmin-201ENSMUST00000025840 2234 ntAPPRIS P3 TSL 1 (best) BASIC15.72■□□□□ 0.11
Herpud1Q9JJK5 Blcap-202ENSMUST00000109528 2056 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Herpud1Q9JJK5 Scaf11-201ENSMUST00000047835 5766 ntTSL 5 BASIC15.72■□□□□ 0.11
Herpud1Q9JJK5 Dynll2-204ENSMUST00000178105 2187 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Herpud1Q9JJK5 Rhbdf1-201ENSMUST00000020524 2946 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Herpud1Q9JJK5 Aire-203ENSMUST00000105396 1749 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.11
Herpud1Q9JJK5 Aire-214ENSMUST00000154374 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.11
Herpud1Q9JJK5 Aire-215ENSMUST00000155021 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.11
Herpud1Q9JJK5 Col4a3bp-202ENSMUST00000109444 5285 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
Herpud1Q9JJK5 Runx2-210ENSMUST00000162373 1565 ntAPPRIS ALT2 TSL 5 BASIC15.71■□□□□ 0.11
Herpud1Q9JJK5 Faxc-201ENSMUST00000029908 2627 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Herpud1Q9JJK5 Matk-205ENSMUST00000121205 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.11
Herpud1Q9JJK5 Cd47-201ENSMUST00000084838 5277 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Herpud1Q9JJK5 Fam168b-208ENSMUST00000191307 844 ntTSL 2 BASIC15.71■□□□□ 0.11
Herpud1Q9JJK5 Slain2-202ENSMUST00000144843 4833 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Herpud1Q9JJK5 1700028E10Rik-201ENSMUST00000181114 2034 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
Herpud1Q9JJK5 Lingo1-203ENSMUST00000114256 2782 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Herpud1Q9JJK5 Creb3l1-201ENSMUST00000028663 2603 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Herpud1Q9JJK5 Prkg2-201ENSMUST00000031277 2618 ntTSL 5 BASIC15.71■□□□□ 0.11
Herpud1Q9JJK5 Smtnl2-201ENSMUST00000050226 2624 ntAPPRIS P2 TSL 1 (best) BASIC15.71■□□□□ 0.11
Herpud1Q9JJK5 Stk11-201ENSMUST00000003152 2566 ntAPPRIS P3 TSL 1 (best) BASIC15.71■□□□□ 0.1
Herpud1Q9JJK5 Sphk1-203ENSMUST00000100201 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.1
Herpud1Q9JJK5 Irx3-201ENSMUST00000093312 2610 ntAPPRIS P4 TSL 1 (best) BASIC15.7■□□□□ 0.1
Herpud1Q9JJK5 Iars2-203ENSMUST00000110975 2801 ntTSL 5 BASIC15.7■□□□□ 0.1
Herpud1Q9JJK5 Golga5-202ENSMUST00000179218 2827 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Herpud1Q9JJK5 Stx2-201ENSMUST00000031378 2939 ntAPPRIS P3 TSL 1 (best) BASIC15.7■□□□□ 0.1
Herpud1Q9JJK5 Pknox2-201ENSMUST00000039674 3632 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Herpud1Q9JJK5 Rragd-203ENSMUST00000098190 5008 ntAPPRIS P1 TSL 2 BASIC15.7■□□□□ 0.1
Herpud1Q9JJK5 Zbtb8a-201ENSMUST00000030610 2321 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Herpud1Q9JJK5 Myd88-201ENSMUST00000035092 1960 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Herpud1Q9JJK5 Polr3gl-204ENSMUST00000145001 607 ntTSL 3 BASIC15.7■□□□□ 0.1
Herpud1Q9JJK5 Igfbp7-202ENSMUST00000163898 1200 ntAPPRIS P4 TSL 5 BASIC15.7■□□□□ 0.1
Herpud1Q9JJK5 4930519P11Rik-201ENSMUST00000181369 501 ntAPPRIS P1 BASIC15.7■□□□□ 0.1
Herpud1Q9JJK5 Rfxap-204ENSMUST00000217267 696 ntAPPRIS P2 TSL 1 (best) BASIC15.7■□□□□ 0.1
Herpud1Q9JJK5 Rps7-203ENSMUST00000221871 820 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Herpud1Q9JJK5 Gpx4-201ENSMUST00000097227 995 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Herpud1Q9JJK5 Nsmf-206ENSMUST00000114388 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
Herpud1Q9JJK5 Setd3-201ENSMUST00000071095 2755 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Herpud1Q9JJK5 Gm11762-201ENSMUST00000135630 1705 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Herpud1Q9JJK5 C2cd4a-201ENSMUST00000054500 1395 ntAPPRIS P1 TSL 5 BASIC15.7■□□□□ 0.1
Herpud1Q9JJK5 Fam105a-202ENSMUST00000226145 2950 ntAPPRIS P1 BASIC15.7■□□□□ 0.1
Herpud1Q9JJK5 Zfp771-201ENSMUST00000052509 1484 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Herpud1Q9JJK5 Gm38534-201ENSMUST00000206566 1909 ntTSL 5 BASIC15.7■□□□□ 0.1
Herpud1Q9JJK5 Nadk2-201ENSMUST00000067760 3731 ntAPPRIS P5 TSL 5 BASIC15.7■□□□□ 0.1
Herpud1Q9JJK5 March11-202ENSMUST00000140840 1558 ntAPPRIS P3 TSL 2 BASIC15.7■□□□□ 0.1
Herpud1Q9JJK5 Ppm1h-201ENSMUST00000067918 6369 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Herpud1Q9JJK5 Cnih3-202ENSMUST00000161880 1995 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Herpud1Q9JJK5 Trak1-209ENSMUST00000210798 5363 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
Herpud1Q9JJK5 Ints8-202ENSMUST00000108318 3169 ntTSL 5 BASIC15.69■□□□□ 0.1
Herpud1Q9JJK5 Trim67-201ENSMUST00000041106 5694 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Herpud1Q9JJK5 Cacfd1-202ENSMUST00000114004 2194 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Herpud1Q9JJK5 Satb1-211ENSMUST00000152830 5993 ntAPPRIS P2 TSL 2 BASIC15.69■□□□□ 0.1
Herpud1Q9JJK5 Egln1-201ENSMUST00000034469 3594 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Herpud1Q9JJK5 Cpne7-201ENSMUST00000037900 2398 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Herpud1Q9JJK5 Tuba1b-201ENSMUST00000077577 1743 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Herpud1Q9JJK5 Dnaja4-202ENSMUST00000120452 1827 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Herpud1Q9JJK5 Pfdn4-204ENSMUST00000109148 736 ntTSL 3 BASIC15.69■□□□□ 0.1
Herpud1Q9JJK5 2810001G20Rik-202ENSMUST00000146333 959 ntTSL 3 BASIC15.69■□□□□ 0.1
Herpud1Q9JJK5 4933406I18Rik-202ENSMUST00000163996 904 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Herpud1Q9JJK5 Cdv3-ps-201ENSMUST00000169632 827 ntBASIC15.69■□□□□ 0.1
Herpud1Q9JJK5 Gsc-201ENSMUST00000021513 1268 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Herpud1Q9JJK5 Hagh-201ENSMUST00000024974 1101 ntAPPRIS ALT1 TSL 5 BASIC15.69■□□□□ 0.1
Herpud1Q9JJK5 AB041806-201ENSMUST00000062902 2105 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Herpud1Q9JJK5 Gm13241-201ENSMUST00000094493 780 ntBASIC15.69■□□□□ 0.1
Herpud1Q9JJK5 St7l-201ENSMUST00000059271 5728 ntAPPRIS P3 TSL 1 (best) BASIC15.69■□□□□ 0.1
Herpud1Q9JJK5 Vmn1r17-201ENSMUST00000227186 2234 ntAPPRIS P2 BASIC15.69■□□□□ 0.1
Herpud1Q9JJK5 Dnpep-204ENSMUST00000185797 2510 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
Herpud1Q9JJK5 Fzd2-201ENSMUST00000057893 3663 ntAPPRIS P1 BASIC15.69■□□□□ 0.1
Herpud1Q9JJK5 Lats2-201ENSMUST00000022531 5191 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Herpud1Q9JJK5 Shkbp1-201ENSMUST00000003857 2358 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Herpud1Q9JJK5 Brsk2-201ENSMUST00000018971 4049 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
Herpud1Q9JJK5 Ccser1-203ENSMUST00000126214 5657 ntAPPRIS P1 TSL 5 BASIC15.69■□□□□ 0.1
Herpud1Q9JJK5 Plekhm2-202ENSMUST00000084203 4136 ntAPPRIS P3 TSL 5 BASIC15.69■□□□□ 0.1
Herpud1Q9JJK5 Tmod1-201ENSMUST00000107773 3158 ntAPPRIS P1 TSL 5 BASIC15.69■□□□□ 0.1
Herpud1Q9JJK5 Vrk1-202ENSMUST00000072040 1509 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
Herpud1Q9JJK5 Mpg-201ENSMUST00000020528 1737 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Herpud1Q9JJK5 Ccdc84-201ENSMUST00000053286 1725 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Herpud1Q9JJK5 Hoxa11os-201ENSMUST00000134512 1839 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Herpud1Q9JJK5 Krt24-201ENSMUST00000017255 1847 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Herpud1Q9JJK5 Cldn23-201ENSMUST00000060128 1848 ntAPPRIS P1 BASIC15.68■□□□□ 0.1
Herpud1Q9JJK5 Lrrc43-203ENSMUST00000196809 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
Herpud1Q9JJK5 Metap1-201ENSMUST00000029804 2686 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Herpud1Q9JJK5 Gm43231-201ENSMUST00000202960 2258 ntBASIC15.68■□□□□ 0.1
Herpud1Q9JJK5 Syt3-203ENSMUST00000120262 2096 ntAPPRIS P1 TSL 5 BASIC15.68■□□□□ 0.1
Herpud1Q9JJK5 E030030I06Rik-202ENSMUST00000179054 2081 ntAPPRIS P4 TSL 1 (best) BASIC15.68■□□□□ 0.1
Herpud1Q9JJK5 Glra1-203ENSMUST00000108853 1797 ntTSL 5 BASIC15.68■□□□□ 0.1
Herpud1Q9JJK5 Nus1-201ENSMUST00000023830 4605 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Retrieved 100 of 76,532 protein–RNA pairs in 25.8 ms