Protein–RNA interactions for Protein: Q9JIS3

Smco4, Single-pass membrane and coiled-coil domain-containing protein 4, mousemouse

Predictions only

Length 59 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smco4Q9JIS3 Ccne1-201ENSMUST00000108023 2000 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Smco4Q9JIS3 Trpc4ap-202ENSMUST00000103140 3091 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
Smco4Q9JIS3 Ncoa5-201ENSMUST00000040381 3179 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Smco4Q9JIS3 Crebl2-201ENSMUST00000046303 3629 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Smco4Q9JIS3 9330111N05Rik-202ENSMUST00000181043 2449 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Smco4Q9JIS3 Tsen34-203ENSMUST00000108629 1238 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Smco4Q9JIS3 Dleu2-204ENSMUST00000182286 666 ntTSL 2 BASIC15.31■□□□□ 0.04
Smco4Q9JIS3 Dleu2-213ENSMUST00000183245 637 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Smco4Q9JIS3 Gm45364-201ENSMUST00000210883 159 ntBASIC15.31■□□□□ 0.04
Smco4Q9JIS3 Ppa2-201ENSMUST00000029644 1226 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
Smco4Q9JIS3 Ppp1r14a-201ENSMUST00000048187 950 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Smco4Q9JIS3 Pdss1-207ENSMUST00000152170 1538 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Smco4Q9JIS3 Fance-201ENSMUST00000088007 1581 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
Smco4Q9JIS3 Anks1b-208ENSMUST00000182053 1649 ntTSL 5 BASIC15.31■□□□□ 0.04
Smco4Q9JIS3 AA543186-201ENSMUST00000180841 1696 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Smco4Q9JIS3 Acbd3-201ENSMUST00000027780 3471 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Smco4Q9JIS3 Slc22a3-201ENSMUST00000024595 3501 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Smco4Q9JIS3 Znfx1-201ENSMUST00000048988 7218 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Smco4Q9JIS3 Ptp4a2-201ENSMUST00000030578 3646 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
Smco4Q9JIS3 Msi2-201ENSMUST00000092794 1855 ntAPPRIS P2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Smco4Q9JIS3 Misp-205ENSMUST00000219305 2569 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Smco4Q9JIS3 Gopc-202ENSMUST00000105475 4317 ntAPPRIS ALT2 TSL 5 BASIC15.3■□□□□ 0.04
Smco4Q9JIS3 Inpp5f-201ENSMUST00000043138 4734 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Smco4Q9JIS3 Ltbp4-202ENSMUST00000108369 5377 ntAPPRIS ALT2 TSL 5 BASIC15.3■□□□□ 0.04
Smco4Q9JIS3 Htra3-202ENSMUST00000114233 1901 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Smco4Q9JIS3 Txnrd2-203ENSMUST00000115606 1905 ntAPPRIS P2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Smco4Q9JIS3 Gm9888-201ENSMUST00000150678 965 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Smco4Q9JIS3 A930017K11Rik-201ENSMUST00000162431 2539 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Smco4Q9JIS3 Gm9885-202ENSMUST00000186234 2209 ntBASIC15.3■□□□□ 0.04
Smco4Q9JIS3 Gm45412-201ENSMUST00000210217 2275 ntBASIC15.3■□□□□ 0.04
Smco4Q9JIS3 Fbxo42-201ENSMUST00000030757 5934 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Smco4Q9JIS3 Zfp768-201ENSMUST00000060783 2356 ntAPPRIS P2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Smco4Q9JIS3 Gpr25-201ENSMUST00000086395 1077 ntAPPRIS P1 BASIC15.3■□□□□ 0.04
Smco4Q9JIS3 Fmnl3-202ENSMUST00000088233 4423 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
Smco4Q9JIS3 Hs6st1-201ENSMUST00000088174 3719 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Smco4Q9JIS3 Alcam-201ENSMUST00000023312 6036 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Smco4Q9JIS3 Smim10l1-201ENSMUST00000100864 2842 ntAPPRIS P1 BASIC15.3■□□□□ 0.04
Smco4Q9JIS3 Tle4-202ENSMUST00000167776 4545 ntAPPRIS ALT1 TSL 5 BASIC15.29■□□□□ 0.04
Smco4Q9JIS3 Irak1bp1-202ENSMUST00000113245 2158 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Smco4Q9JIS3 Blcap-202ENSMUST00000109528 2056 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Smco4Q9JIS3 Gm18688-201ENSMUST00000204695 1859 ntBASIC15.29■□□□□ 0.04
Smco4Q9JIS3 Tsc22d1-201ENSMUST00000022587 1762 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Smco4Q9JIS3 Srf-201ENSMUST00000015749 4093 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Smco4Q9JIS3 Susd3-203ENSMUST00000119721 1249 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Smco4Q9JIS3 AC117769.4-201ENSMUST00000225679 685 ntBASIC15.29■□□□□ 0.04
Smco4Q9JIS3 AC123834.2-201ENSMUST00000224038 2340 ntBASIC15.29■□□□□ 0.04
Smco4Q9JIS3 Pacs2-207ENSMUST00000223502 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Smco4Q9JIS3 Zbtb7c-202ENSMUST00000167921 2147 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Smco4Q9JIS3 Hoxa1-202ENSMUST00000120363 2043 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Smco4Q9JIS3 Azi2-207ENSMUST00000134433 2499 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Smco4Q9JIS3 Foxp4-204ENSMUST00000113265 3999 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Smco4Q9JIS3 Maf1-204ENSMUST00000160172 1537 ntAPPRIS ALT2 TSL 5 BASIC15.28■□□□□ 0.04
Smco4Q9JIS3 Arhgap44-202ENSMUST00000093001 2256 ntTSL 2 BASIC15.28■□□□□ 0.04
Smco4Q9JIS3 Pmepa1-201ENSMUST00000036248 4538 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Smco4Q9JIS3 Txndc9-207ENSMUST00000195032 1444 ntAPPRIS P1 TSL 2 BASIC15.28■□□□□ 0.04
Smco4Q9JIS3 Ctnnbip1-201ENSMUST00000030839 2674 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Smco4Q9JIS3 Ispd-201ENSMUST00000062041 2690 ntAPPRIS P2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Smco4Q9JIS3 Lrrc57-204ENSMUST00000102499 1961 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Smco4Q9JIS3 Cpox-201ENSMUST00000060077 3186 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Smco4Q9JIS3 Ripor2-205ENSMUST00000110384 5608 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Smco4Q9JIS3 Apbb1-214ENSMUST00000189378 2878 ntAPPRIS ALT1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Smco4Q9JIS3 Gtf2e2-202ENSMUST00000170705 1634 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Smco4Q9JIS3 Ckap4-202ENSMUST00000167671 2606 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Smco4Q9JIS3 Pkn1-201ENSMUST00000005616 6662 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
Smco4Q9JIS3 Lgals3-201ENSMUST00000142734 1419 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Smco4Q9JIS3 Flt3l-211ENSMUST00000211429 1358 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.04
Smco4Q9JIS3 D830050J10Rik-202ENSMUST00000203858 1813 ntBASIC15.27■□□□□ 0.04
Smco4Q9JIS3 Gm5602-201ENSMUST00000146366 1763 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Smco4Q9JIS3 Nhsl1-209ENSMUST00000207038 4854 ntAPPRIS ALT2 TSL 5 BASIC15.27■□□□□ 0.04
Smco4Q9JIS3 Srsf2-206ENSMUST00000190993 1326 ntAPPRIS P1 TSL 2 BASIC15.27■□□□□ 0.04
Smco4Q9JIS3 Gm11529-201ENSMUST00000153012 639 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Smco4Q9JIS3 1700051O22Rik-202ENSMUST00000195451 638 ntBASIC15.27■□□□□ 0.04
Smco4Q9JIS3 Gm44428-201ENSMUST00000204474 874 ntBASIC15.27■□□□□ 0.04
Smco4Q9JIS3 Gm15635-204ENSMUST00000208024 2539 ntBASIC15.27■□□□□ 0.03
Smco4Q9JIS3 Dtnb-222ENSMUST00000174479 3689 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
Smco4Q9JIS3 Map3k10-201ENSMUST00000036453 3682 ntAPPRIS P2 TSL 1 (best) BASIC15.27■□□□□ 0.03
Smco4Q9JIS3 Zfp318-201ENSMUST00000113481 7850 ntAPPRIS P4 TSL 5 BASIC15.27■□□□□ 0.03
Smco4Q9JIS3 Ttc6-201ENSMUST00000101398 1484 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
Smco4Q9JIS3 Ube2d3-202ENSMUST00000166033 2504 ntAPPRIS P2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Smco4Q9JIS3 Lpgat1-202ENSMUST00000110856 2792 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Smco4Q9JIS3 Ccdc84-201ENSMUST00000053286 1725 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Smco4Q9JIS3 Rbfa-201ENSMUST00000025462 1377 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Smco4Q9JIS3 Prkg2-201ENSMUST00000031277 2618 ntTSL 5 BASIC15.26■□□□□ 0.03
Smco4Q9JIS3 Cacna1h-202ENSMUST00000159048 8174 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Smco4Q9JIS3 Mfsd4a-203ENSMUST00000112370 2565 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Smco4Q9JIS3 Cacfd1-203ENSMUST00000114005 1286 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Smco4Q9JIS3 AC124603.1-201ENSMUST00000223843 308 ntBASIC15.26■□□□□ 0.03
Smco4Q9JIS3 Mrps15-201ENSMUST00000030675 937 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Smco4Q9JIS3 S1pr5-201ENSMUST00000122088 2500 ntAPPRIS P1 TSL 2 BASIC15.26■□□□□ 0.03
Smco4Q9JIS3 Zfp219-204ENSMUST00000226522 2804 ntAPPRIS P2 BASIC15.26■□□□□ 0.03
Smco4Q9JIS3 Fbxo30-201ENSMUST00000070300 2492 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Smco4Q9JIS3 Hpn-202ENSMUST00000108102 1830 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Smco4Q9JIS3 Cd24a-201ENSMUST00000058714 1816 ntAPPRIS P2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Smco4Q9JIS3 Blcap-201ENSMUST00000088494 2108 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Smco4Q9JIS3 Osgin2-201ENSMUST00000037198 2658 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Smco4Q9JIS3 Mon1a-201ENSMUST00000035202 2042 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Smco4Q9JIS3 Rhov-201ENSMUST00000037360 1703 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Smco4Q9JIS3 Cnpy1-202ENSMUST00000118882 1984 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Smco4Q9JIS3 Adgrl1-205ENSMUST00000132500 5719 ntTSL 5 BASIC15.25■□□□□ 0.03
Smco4Q9JIS3 Pomgnt1-203ENSMUST00000106498 2719 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Retrieved 100 of 76,532 protein–RNA pairs in 24.9 ms