Protein–RNA interactions for Protein: Q8VC97

Upb1, Beta-ureidopropionase, mousemouse

Predictions only

Length 393 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Upb1Q8VC97 E4f1-201ENSMUST00000056032 2574 ntAPPRIS P2 TSL 1 (best) BASIC20.62■□□□□ 0.89
Upb1Q8VC97 Gpn2-201ENSMUST00000030661 1367 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Upb1Q8VC97 P2ry2-202ENSMUST00000178340 2137 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Upb1Q8VC97 6030419C18Rik-201ENSMUST00000085658 2139 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Upb1Q8VC97 Capzb-203ENSMUST00000102507 1702 ntAPPRIS P4 TSL 1 (best) BASIC20.62■□□□□ 0.89
Upb1Q8VC97 2300009A05Rik-201ENSMUST00000168665 595 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Upb1Q8VC97 Cldn3-201ENSMUST00000094245 1259 ntAPPRIS P1 BASIC20.62■□□□□ 0.89
Upb1Q8VC97 Hipk1-201ENSMUST00000029438 4185 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Upb1Q8VC97 Dpf1-201ENSMUST00000049977 2309 ntAPPRIS P2 TSL 1 (best) BASIC20.62■□□□□ 0.89
Upb1Q8VC97 Cdkl3-204ENSMUST00000109077 2605 ntAPPRIS ALT2 TSL 5 BASIC20.62■□□□□ 0.89
Upb1Q8VC97 Hoxc6-201ENSMUST00000001711 1581 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Upb1Q8VC97 Donson-203ENSMUST00000117159 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
Upb1Q8VC97 Tuba3a-201ENSMUST00000088246 1509 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Upb1Q8VC97 Stx4a-201ENSMUST00000033075 1456 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Upb1Q8VC97 Vstm2b-201ENSMUST00000044705 2627 ntAPPRIS P1 TSL 5 BASIC20.61■□□□□ 0.89
Upb1Q8VC97 Cfap36-201ENSMUST00000020754 1664 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Upb1Q8VC97 Rchy1-201ENSMUST00000031345 1967 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Upb1Q8VC97 Slc11a1-211ENSMUST00000187516 1893 ntAPPRIS ALT2 TSL 5 BASIC20.61■□□□□ 0.89
Upb1Q8VC97 Avp-201ENSMUST00000046001 577 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Upb1Q8VC97 Tcap-201ENSMUST00000008021 948 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Upb1Q8VC97 Tysnd1-201ENSMUST00000020284 2286 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Upb1Q8VC97 Gal3st3-201ENSMUST00000061169 2421 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Upb1Q8VC97 Ssbp2-202ENSMUST00000042122 1633 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
Upb1Q8VC97 Sra1-201ENSMUST00000001415 2061 ntAPPRIS P4 TSL 5 BASIC20.6■□□□□ 0.89
Upb1Q8VC97 Ppt2-204ENSMUST00000168391 1342 ntAPPRIS P1 TSL 5 BASIC20.6■□□□□ 0.89
Upb1Q8VC97 Sstr1-201ENSMUST00000044299 2014 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Upb1Q8VC97 Romo1-202ENSMUST00000109597 550 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Upb1Q8VC97 Smim27-201ENSMUST00000129758 1044 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Upb1Q8VC97 Gm44210-201ENSMUST00000205253 713 ntTSL 3 BASIC20.6■□□□□ 0.89
Upb1Q8VC97 Tmem42-202ENSMUST00000213514 631 ntTSL 3 BASIC20.6■□□□□ 0.89
Upb1Q8VC97 Uqcc2-201ENSMUST00000025045 500 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Upb1Q8VC97 Gm37352-201ENSMUST00000193908 2181 ntBASIC20.6■□□□□ 0.89
Upb1Q8VC97 Stim2-201ENSMUST00000117661 4934 ntAPPRIS P2 TSL 1 (best) BASIC20.6■□□□□ 0.89
Upb1Q8VC97 Mreg-201ENSMUST00000048860 2284 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Upb1Q8VC97 Ciapin1-201ENSMUST00000034233 1807 ntAPPRIS P1 TSL 5 BASIC20.6■□□□□ 0.89
Upb1Q8VC97 1700003E16Rik-201ENSMUST00000032106 2020 ntAPPRIS P1 TSL 5 BASIC20.6■□□□□ 0.89
Upb1Q8VC97 Kifc3-201ENSMUST00000034240 3277 ntAPPRIS P4 TSL 1 (best) BASIC20.59■□□□□ 0.89
Upb1Q8VC97 Pank2-204ENSMUST00000150843 4266 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Upb1Q8VC97 Kcnq2-203ENSMUST00000081528 2382 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
Upb1Q8VC97 1700065D16Rik-204ENSMUST00000189348 1540 ntTSL 2 BASIC20.59■□□□□ 0.89
Upb1Q8VC97 Arpc5-202ENSMUST00000097536 1737 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
Upb1Q8VC97 Paqr6-204ENSMUST00000147991 1670 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Upb1Q8VC97 Pabpn1-205ENSMUST00000141446 912 ntAPPRIS ALT2 TSL 3 BASIC20.59■□□□□ 0.89
Upb1Q8VC97 Gm6211-202ENSMUST00000167849 925 ntBASIC20.59■□□□□ 0.89
Upb1Q8VC97 Mcl1-202ENSMUST00000178686 858 ntAPPRIS ALT2 TSL 1 (best) BASIC20.59■□□□□ 0.89
Upb1Q8VC97 CT025689.6-201ENSMUST00000224991 1104 ntBASIC20.59■□□□□ 0.89
Upb1Q8VC97 Irx2-201ENSMUST00000074372 2625 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Upb1Q8VC97 Ppm1m-203ENSMUST00000140761 1846 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Upb1Q8VC97 Nt5c3b-204ENSMUST00000107398 1635 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
Upb1Q8VC97 Acot7-201ENSMUST00000030779 1425 ntAPPRIS ALT2 TSL 1 (best) BASIC20.59■□□□□ 0.89
Upb1Q8VC97 Vim-206ENSMUST00000193675 1777 ntAPPRIS ALT2 TSL 5 BASIC20.59■□□□□ 0.89
Upb1Q8VC97 Ntmt1-201ENSMUST00000041830 1387 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Upb1Q8VC97 Rad1-201ENSMUST00000022856 1514 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Upb1Q8VC97 Gm26971-201ENSMUST00000182423 1072 ntBASIC20.58■□□□□ 0.89
Upb1Q8VC97 Jsrp1-201ENSMUST00000020435 955 ntAPPRIS ALT2 TSL 2 BASIC20.58■□□□□ 0.89
Upb1Q8VC97 AC175538.2-202ENSMUST00000224997 1057 ntAPPRIS P1 BASIC20.58■□□□□ 0.89
Upb1Q8VC97 Gpc3-202ENSMUST00000114857 1880 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
Upb1Q8VC97 1810055G02Rik-201ENSMUST00000039048 1882 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
Upb1Q8VC97 Smad4-201ENSMUST00000025393 3384 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Upb1Q8VC97 2610528J11Rik-202ENSMUST00000106367 736 ntAPPRIS P1 TSL 2 BASIC20.57■□□□□ 0.88
Upb1Q8VC97 Gm13148-201ENSMUST00000118892 745 ntBASIC20.57■□□□□ 0.88
Upb1Q8VC97 Gm3807-201ENSMUST00000193520 1168 ntBASIC20.57■□□□□ 0.88
Upb1Q8VC97 Gm44238-201ENSMUST00000203300 353 ntTSL 3 BASIC20.57■□□□□ 0.88
Upb1Q8VC97 Gmpr-201ENSMUST00000000260 1580 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Upb1Q8VC97 Slc7a6os-201ENSMUST00000035925 1246 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Upb1Q8VC97 Samd10-201ENSMUST00000060173 2164 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Upb1Q8VC97 Desi2-204ENSMUST00000161075 2590 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
Upb1Q8VC97 Mrps16-201ENSMUST00000061444 2572 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Upb1Q8VC97 Hexa-201ENSMUST00000026262 1996 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Upb1Q8VC97 Brsk2-205ENSMUST00000172652 2501 ntTSL 5 BASIC20.57■□□□□ 0.88
Upb1Q8VC97 Gm16262-201ENSMUST00000162306 1751 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
Upb1Q8VC97 Ahsa2-201ENSMUST00000020529 3023 ntAPPRIS P3 TSL 1 (best) BASIC20.56■□□□□ 0.88
Upb1Q8VC97 Smarcd3-208ENSMUST00000195943 1712 ntTSL 5 BASIC20.56■□□□□ 0.88
Upb1Q8VC97 Smarcd3-201ENSMUST00000030791 1735 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Upb1Q8VC97 Phc2-202ENSMUST00000106079 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC20.56■□□□□ 0.88
Upb1Q8VC97 Mgll-203ENSMUST00000113582 1034 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
Upb1Q8VC97 Rex1bd-206ENSMUST00000136913 671 ntAPPRIS ALT2 TSL 5 BASIC20.56■□□□□ 0.88
Upb1Q8VC97 Spcs1-207ENSMUST00000228767 1008 ntBASIC20.56■□□□□ 0.88
Upb1Q8VC97 Cox4i1-201ENSMUST00000034276 745 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Upb1Q8VC97 Khdc3-201ENSMUST00000034737 1681 ntAPPRIS P3 TSL 1 (best) BASIC20.56■□□□□ 0.88
Upb1Q8VC97 Cdo1-201ENSMUST00000035804 1530 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Upb1Q8VC97 Smad6-201ENSMUST00000041029 2971 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Upb1Q8VC97 Cdan1-202ENSMUST00000110701 6384 ntAPPRIS P2 TSL 5 BASIC20.56■□□□□ 0.88
Upb1Q8VC97 Dtnb-210ENSMUST00000173199 2820 ntAPPRIS ALT2 TSL 5 BASIC20.56■□□□□ 0.88
Upb1Q8VC97 Ascl4-202ENSMUST00000170396 2016 ntAPPRIS P1 BASIC20.56■□□□□ 0.88
Upb1Q8VC97 Rfk-201ENSMUST00000025617 2482 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Upb1Q8VC97 Magi2-202ENSMUST00000101558 6530 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
Upb1Q8VC97 Mknk2-205ENSMUST00000200082 3439 ntAPPRIS P2 TSL 1 (best) BASIC20.55■□□□□ 0.88
Upb1Q8VC97 Bmpr1b-202ENSMUST00000098568 1910 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Upb1Q8VC97 Dnpep-204ENSMUST00000185797 2510 ntAPPRIS ALT2 TSL 1 (best) BASIC20.55■□□□□ 0.88
Upb1Q8VC97 3110062M04Rik-202ENSMUST00000115006 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC20.55■□□□□ 0.88
Upb1Q8VC97 3110082J24Rik-201ENSMUST00000127749 327 ntAPPRIS P1 TSL 5 BASIC20.55■□□□□ 0.88
Upb1Q8VC97 Immp2l-203ENSMUST00000134965 977 ntAPPRIS P1 TSL 5 BASIC20.55■□□□□ 0.88
Upb1Q8VC97 A230065N10Rik-201ENSMUST00000172178 1028 ntBASIC20.55■□□□□ 0.88
Upb1Q8VC97 Rps2-ps11-201ENSMUST00000195283 868 ntBASIC20.55■□□□□ 0.88
Upb1Q8VC97 Ypel3-201ENSMUST00000038614 973 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Upb1Q8VC97 Klhdc3-202ENSMUST00000165007 1973 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Upb1Q8VC97 Caml-201ENSMUST00000021963 1382 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Upb1Q8VC97 Zbtb4-203ENSMUST00000108640 4067 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Upb1Q8VC97 Sos2-206ENSMUST00000183277 4512 ntAPPRIS ALT2 TSL 5 BASIC20.55■□□□□ 0.88
Retrieved 100 of 76,532 protein–RNA pairs in 50.9 ms