Protein–RNA interactions for Protein: Q3U435

Mmp25, Matrix metalloproteinase-25, mousemouse

Predictions only

Length 615 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Mmp25Q3U435 Scn1b-203ENSMUST00000211945 1501 ntAPPRIS P1 TSL 5 BASIC17.85■□□□□ 0.45
Mmp25Q3U435 Oaf-201ENSMUST00000034512 2526 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Mmp25Q3U435 Golga7-201ENSMUST00000051094 1792 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Mmp25Q3U435 Gal3st3-201ENSMUST00000061169 2421 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Mmp25Q3U435 Nrxn2-205ENSMUST00000113462 6667 ntAPPRIS P4 TSL 1 (best) BASIC17.85■□□□□ 0.45
Mmp25Q3U435 Klhl8-201ENSMUST00000031254 3193 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Mmp25Q3U435 Kdm1a-203ENSMUST00000116273 3008 ntAPPRIS P3 TSL 1 (best) BASIC17.85■□□□□ 0.45
Mmp25Q3U435 Maml1-201ENSMUST00000059458 5528 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Mmp25Q3U435 Slc35a2-203ENSMUST00000115663 1527 ntAPPRIS P4 TSL 2 BASIC17.84■□□□□ 0.45
Mmp25Q3U435 Med25-201ENSMUST00000003049 2619 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
Mmp25Q3U435 S100a6-201ENSMUST00000001051 731 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Mmp25Q3U435 Tsc22d4-205ENSMUST00000110985 790 ntAPPRIS ALT2 TSL 2 BASIC17.84■□□□□ 0.45
Mmp25Q3U435 Slc35b2-207ENSMUST00000226086 850 ntBASIC17.84■□□□□ 0.45
Mmp25Q3U435 Ltb-201ENSMUST00000025262 1160 ntAPPRIS P2 TSL 1 (best) BASIC17.84■□□□□ 0.45
Mmp25Q3U435 Gm26660-201ENSMUST00000181582 2543 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
Mmp25Q3U435 Hdgfl3-202ENSMUST00000107305 5887 ntAPPRIS P2 TSL 1 (best) BASIC17.83■□□□□ 0.45
Mmp25Q3U435 Spg7-211ENSMUST00000153285 2481 ntAPPRIS ALT2 TSL 5 BASIC17.83■□□□□ 0.45
Mmp25Q3U435 Gdf11-201ENSMUST00000026408 4062 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
Mmp25Q3U435 Lefty1-201ENSMUST00000037361 1620 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
Mmp25Q3U435 Dao-201ENSMUST00000086599 1525 ntTSL 1 (best) BASIC17.83■□□□□ 0.45
Mmp25Q3U435 Ltk-202ENSMUST00000082130 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.45
Mmp25Q3U435 Tssk2-201ENSMUST00000055374 1387 ntAPPRIS P1 BASIC17.83■□□□□ 0.45
Mmp25Q3U435 Zfp523-202ENSMUST00000073534 2654 ntAPPRIS P1 TSL 5 BASIC17.83■□□□□ 0.44
Mmp25Q3U435 Runx1-203ENSMUST00000168195 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.44
Mmp25Q3U435 Gm15298-201ENSMUST00000145916 1212 ntTSL 5 BASIC17.83■□□□□ 0.44
Mmp25Q3U435 Hist2h3c2-201ENSMUST00000167403 1020 ntAPPRIS P1 BASIC17.83■□□□□ 0.44
Mmp25Q3U435 Rian-206ENSMUST00000182119 329 ntTSL 3 BASIC17.83■□□□□ 0.44
Mmp25Q3U435 Stx6-209ENSMUST00000195302 955 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
Mmp25Q3U435 C230062I16Rik-202ENSMUST00000207746 1022 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
Mmp25Q3U435 Gm45890-202ENSMUST00000212188 1052 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
Mmp25Q3U435 Sds-201ENSMUST00000066540 1207 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Mmp25Q3U435 Meis3-205ENSMUST00000176506 1839 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
Mmp25Q3U435 Mael-201ENSMUST00000038782 1546 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Mmp25Q3U435 Psen2-202ENSMUST00000111104 1475 ntAPPRIS ALT1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Mmp25Q3U435 Ildr2-204ENSMUST00000192732 2263 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Mmp25Q3U435 Adap2-201ENSMUST00000021050 1785 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Mmp25Q3U435 Cnbp-208ENSMUST00000204653 2175 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Mmp25Q3U435 Cnbp-201ENSMUST00000032138 2178 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Mmp25Q3U435 Arpc5-202ENSMUST00000097536 1737 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Mmp25Q3U435 Zfp467-201ENSMUST00000101443 599 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Mmp25Q3U435 Tmem54-203ENSMUST00000106064 1066 ntAPPRIS P3 TSL 1 (best) BASIC17.82■□□□□ 0.44
Mmp25Q3U435 A830035A12Rik-201ENSMUST00000147445 861 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Mmp25Q3U435 Psmd3-201ENSMUST00000017365 2148 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Mmp25Q3U435 A730056A06Rik-202ENSMUST00000206959 526 ntTSL 3 BASIC17.82■□□□□ 0.44
Mmp25Q3U435 Rpl21-203ENSMUST00000099272 1067 ntAPPRIS P1 TSL 3 BASIC17.82■□□□□ 0.44
Mmp25Q3U435 Sept7-201ENSMUST00000115272 2533 ntAPPRIS ALT1 TSL 5 BASIC17.82■□□□□ 0.44
Mmp25Q3U435 Rchy1-201ENSMUST00000031345 1967 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Mmp25Q3U435 Cwh43-202ENSMUST00000065543 2316 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Mmp25Q3U435 Rad1-201ENSMUST00000022856 1514 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Mmp25Q3U435 Acot7-201ENSMUST00000030779 1425 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
Mmp25Q3U435 AC123857.1-201ENSMUST00000181053 2312 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Mmp25Q3U435 Mgat2-201ENSMUST00000060579 2614 ntAPPRIS P1 BASIC17.81■□□□□ 0.44
Mmp25Q3U435 Gm36033-202ENSMUST00000214827 745 ntTSL 2 BASIC17.81■□□□□ 0.44
Mmp25Q3U435 AC164629.5-201ENSMUST00000220387 632 ntBASIC17.81■□□□□ 0.44
Mmp25Q3U435 Dnpep-204ENSMUST00000185797 2510 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
Mmp25Q3U435 Mtg1-201ENSMUST00000036977 1595 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Mmp25Q3U435 Gpc3-202ENSMUST00000114857 1880 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Mmp25Q3U435 Gm15751-201ENSMUST00000134552 1862 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Mmp25Q3U435 Lgmn-202ENSMUST00000110020 1835 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Mmp25Q3U435 Nags-201ENSMUST00000055409 2028 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Mmp25Q3U435 Ldb1-201ENSMUST00000026252 1718 ntAPPRIS P2 TSL 1 (best) BASIC17.81■□□□□ 0.44
Mmp25Q3U435 Slc39a5-201ENSMUST00000042666 1947 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Mmp25Q3U435 Gm10655-201ENSMUST00000098658 1397 ntBASIC17.8■□□□□ 0.44
Mmp25Q3U435 Hsf1-204ENSMUST00000226872 2104 ntBASIC17.8■□□□□ 0.44
Mmp25Q3U435 Gm3667-201ENSMUST00000171906 2053 ntAPPRIS P1 TSL 5 BASIC17.8■□□□□ 0.44
Mmp25Q3U435 Adamtsl5-202ENSMUST00000105352 989 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Mmp25Q3U435 Gm29442-201ENSMUST00000188725 724 ntTSL 3 BASIC17.8■□□□□ 0.44
Mmp25Q3U435 Gm39115-201ENSMUST00000211350 699 ntAPPRIS P1 BASIC17.8■□□□□ 0.44
Mmp25Q3U435 Ndufa5-201ENSMUST00000023851 875 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Mmp25Q3U435 Psenen-201ENSMUST00000043898 708 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Mmp25Q3U435 Vrk1-202ENSMUST00000072040 1509 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
Mmp25Q3U435 Ak2-202ENSMUST00000102604 1781 ntAPPRIS ALT1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Mmp25Q3U435 Gm30003-201ENSMUST00000200700 1433 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Mmp25Q3U435 Lfng-201ENSMUST00000031555 2305 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Mmp25Q3U435 Csnk1a1-210ENSMUST00000170862 2259 ntAPPRIS ALT1 TSL 5 BASIC17.79■□□□□ 0.44
Mmp25Q3U435 Ipp-202ENSMUST00000106479 2118 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Mmp25Q3U435 Dap-205ENSMUST00000186547 535 ntTSL 3 BASIC17.79■□□□□ 0.44
Mmp25Q3U435 Gm44732-201ENSMUST00000208055 635 ntTSL 3 BASIC17.79■□□□□ 0.44
Mmp25Q3U435 Zfp125-203ENSMUST00000208744 928 ntTSL 5 BASIC17.79■□□□□ 0.44
Mmp25Q3U435 Ipp-201ENSMUST00000030461 2115 ntAPPRIS P1 TSL 5 BASIC17.79■□□□□ 0.44
Mmp25Q3U435 Lhx2-203ENSMUST00000143783 1696 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Mmp25Q3U435 Gabbr1-201ENSMUST00000025338 5248 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Mmp25Q3U435 Fyn-204ENSMUST00000126486 2495 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Mmp25Q3U435 Cachd1-201ENSMUST00000030257 5765 ntAPPRIS P2 TSL 1 (best) BASIC17.79■□□□□ 0.44
Mmp25Q3U435 Rora-202ENSMUST00000113624 2591 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Mmp25Q3U435 Dhx15-205ENSMUST00000199321 2550 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Mmp25Q3U435 Ntmt1-201ENSMUST00000041830 1387 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Mmp25Q3U435 Numbl-201ENSMUST00000079258 2760 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Mmp25Q3U435 Tgfbr3l-201ENSMUST00000110993 1075 ntAPPRIS P1 TSL 5 BASIC17.78■□□□□ 0.44
Mmp25Q3U435 Speg-206ENSMUST00000122266 917 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Mmp25Q3U435 E130307A14Rik-208ENSMUST00000145971 830 ntTSL 3 BASIC17.78■□□□□ 0.44
Mmp25Q3U435 Gm4881-201ENSMUST00000206705 1152 ntAPPRIS P1 TSL 5 BASIC17.78■□□□□ 0.44
Mmp25Q3U435 Psmb5-201ENSMUST00000022803 899 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Mmp25Q3U435 Avp-201ENSMUST00000046001 577 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Mmp25Q3U435 Jkamp-201ENSMUST00000057257 1292 ntAPPRIS P3 TSL 1 (best) BASIC17.78■□□□□ 0.44
Mmp25Q3U435 Tmem53-201ENSMUST00000062824 991 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Mmp25Q3U435 Hcn2-201ENSMUST00000020581 3089 ntAPPRIS P1 TSL 5 BASIC17.78■□□□□ 0.44
Mmp25Q3U435 Shox2-201ENSMUST00000029422 3079 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Mmp25Q3U435 Qrich1-206ENSMUST00000193258 2291 ntTSL 2 BASIC17.78■□□□□ 0.44
Mmp25Q3U435 Zbtb10-201ENSMUST00000155203 7414 ntAPPRIS P1 TSL 5 BASIC17.78■□□□□ 0.44
Retrieved 100 of 76,532 protein–RNA pairs in 23.9 ms