Protein–RNA interactions for Protein: Q8C1Q6

Smim4, Small integral membrane protein 4, mousemouse

Predictions only

Length 80 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smim4Q8C1Q6 Zhx1-202ENSMUST00000110168 5212 ntAPPRIS P1 TSL 5 BASIC15.94■□□□□ 0.14
Smim4Q8C1Q6 Ascl1-201ENSMUST00000020243 2481 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Smim4Q8C1Q6 Ubp1-201ENSMUST00000009885 3742 ntAPPRIS ALT1 TSL 5 BASIC15.93■□□□□ 0.14
Smim4Q8C1Q6 Ankra2-205ENSMUST00000150916 1028 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
Smim4Q8C1Q6 Ubxn1-202ENSMUST00000166407 1032 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Smim4Q8C1Q6 Pawr-202ENSMUST00000218332 870 ntAPPRIS ALT2 TSL 1 (best) BASIC15.93■□□□□ 0.14
Smim4Q8C1Q6 AC124603.1-201ENSMUST00000223843 308 ntBASIC15.93■□□□□ 0.14
Smim4Q8C1Q6 Gm9847-201ENSMUST00000052528 599 ntBASIC15.93■□□□□ 0.14
Smim4Q8C1Q6 Sqstm1-202ENSMUST00000102774 2037 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Smim4Q8C1Q6 Kcne1l-201ENSMUST00000134825 1543 ntAPPRIS P1 BASIC15.93■□□□□ 0.14
Smim4Q8C1Q6 Sra1-201ENSMUST00000001415 2061 ntAPPRIS P4 TSL 5 BASIC15.93■□□□□ 0.14
Smim4Q8C1Q6 Cdk4-201ENSMUST00000006911 2053 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Smim4Q8C1Q6 Dleu2-203ENSMUST00000182259 1437 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
Smim4Q8C1Q6 Crlf2-203ENSMUST00000200284 1405 ntAPPRIS ALT2 TSL 1 (best) BASIC15.93■□□□□ 0.14
Smim4Q8C1Q6 Mgll-202ENSMUST00000113581 1308 ntTSL 5 BASIC15.93■□□□□ 0.14
Smim4Q8C1Q6 Stac3-201ENSMUST00000035839 1790 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Smim4Q8C1Q6 Camk2d-228ENSMUST00000200171 5396 ntTSL 5 BASIC15.92■□□□□ 0.14
Smim4Q8C1Q6 Rer1-201ENSMUST00000030914 1596 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Smim4Q8C1Q6 Pknox2-201ENSMUST00000039674 3632 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Smim4Q8C1Q6 E2f1-202ENSMUST00000103145 2732 ntAPPRIS P3 TSL 1 (best) BASIC15.92■□□□□ 0.14
Smim4Q8C1Q6 Tnrc6c-202ENSMUST00000106344 8847 ntAPPRIS P1 TSL 5 BASIC15.92■□□□□ 0.14
Smim4Q8C1Q6 Slk-201ENSMUST00000026043 7278 ntAPPRIS ALT2 TSL 1 (best) BASIC15.92■□□□□ 0.14
Smim4Q8C1Q6 Rfxap-204ENSMUST00000217267 696 ntAPPRIS P2 TSL 1 (best) BASIC15.92■□□□□ 0.14
Smim4Q8C1Q6 Gm9922-201ENSMUST00000066461 435 ntAPPRIS P1 BASIC15.92■□□□□ 0.14
Smim4Q8C1Q6 Arhgef1-204ENSMUST00000117796 3508 ntAPPRIS ALT2 TSL 1 (best) BASIC15.92■□□□□ 0.14
Smim4Q8C1Q6 Twist2-201ENSMUST00000007949 1329 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Smim4Q8C1Q6 Ptpre-201ENSMUST00000073961 5410 ntAPPRIS P3 TSL 1 (best) BASIC15.92■□□□□ 0.14
Smim4Q8C1Q6 Clk3-201ENSMUST00000065330 2496 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Smim4Q8C1Q6 Pde1b-201ENSMUST00000023132 3218 ntAPPRIS P2 TSL 1 (best) BASIC15.91■□□□□ 0.14
Smim4Q8C1Q6 Mirt1-201ENSMUST00000180489 5292 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
Smim4Q8C1Q6 Ildr2-204ENSMUST00000192732 2263 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
Smim4Q8C1Q6 Atp8b2-201ENSMUST00000069805 5559 ntAPPRIS ALT2 TSL 5 BASIC15.91■□□□□ 0.14
Smim4Q8C1Q6 Fam46a-202ENSMUST00000187711 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC15.91■□□□□ 0.14
Smim4Q8C1Q6 Mark2-206ENSMUST00000164205 3104 ntAPPRIS ALT2 TSL 1 (best) BASIC15.9■□□□□ 0.14
Smim4Q8C1Q6 Sco1-202ENSMUST00000108690 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC15.9■□□□□ 0.14
Smim4Q8C1Q6 Map3k1-201ENSMUST00000109267 6978 ntAPPRIS P1 TSL 2 BASIC15.9■□□□□ 0.14
Smim4Q8C1Q6 Relb-202ENSMUST00000094762 2209 ntAPPRIS P3 TSL 1 (best) BASIC15.9■□□□□ 0.14
Smim4Q8C1Q6 Relb-203ENSMUST00000098754 2203 ntAPPRIS ALT2 TSL 5 BASIC15.9■□□□□ 0.14
Smim4Q8C1Q6 Hopxos-201ENSMUST00000148568 1661 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
Smim4Q8C1Q6 Arpp19-206ENSMUST00000168301 599 ntTSL 5 BASIC15.9■□□□□ 0.14
Smim4Q8C1Q6 Usf2-211ENSMUST00000172417 648 ntTSL 5 BASIC15.9■□□□□ 0.14
Smim4Q8C1Q6 Rce1-201ENSMUST00000025823 1402 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Smim4Q8C1Q6 Csnk2a2-203ENSMUST00000212214 6779 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Smim4Q8C1Q6 1810055G02Rik-201ENSMUST00000039048 1882 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Smim4Q8C1Q6 Dio3-202ENSMUST00000173014 2030 ntAPPRIS P1 BASIC15.9■□□□□ 0.14
Smim4Q8C1Q6 Tmem123-201ENSMUST00000052865 2907 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Smim4Q8C1Q6 Sebox-202ENSMUST00000125670 1300 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
Smim4Q8C1Q6 Pou2f2-206ENSMUST00000108418 1934 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
Smim4Q8C1Q6 Arih1-207ENSMUST00000171975 6971 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Smim4Q8C1Q6 Tmem179-201ENSMUST00000066791 2380 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Smim4Q8C1Q6 Ppp1r13b-201ENSMUST00000054815 4389 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.14
Smim4Q8C1Q6 Arhgap44-202ENSMUST00000093001 2256 ntTSL 2 BASIC15.89■□□□□ 0.13
Smim4Q8C1Q6 Krt87-201ENSMUST00000081945 1826 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Smim4Q8C1Q6 Lrch2-201ENSMUST00000112819 4892 ntAPPRIS P1 TSL 5 BASIC15.89■□□□□ 0.13
Smim4Q8C1Q6 Cdk5r2-201ENSMUST00000160379 2799 ntAPPRIS P1 BASIC15.89■□□□□ 0.13
Smim4Q8C1Q6 Mrpl3-205ENSMUST00000149243 2309 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
Smim4Q8C1Q6 Cacna1b-202ENSMUST00000070864 9655 ntAPPRIS P3 TSL 5 BASIC15.89■□□□□ 0.13
Smim4Q8C1Q6 Slc11a1-211ENSMUST00000187516 1893 ntAPPRIS ALT2 TSL 5 BASIC15.89■□□□□ 0.13
Smim4Q8C1Q6 Lypla2-202ENSMUST00000105852 1588 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Smim4Q8C1Q6 Khk-204ENSMUST00000201621 1583 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Smim4Q8C1Q6 Clcn4-206ENSMUST00000210594 2539 ntAPPRIS ALT2 TSL 5 BASIC15.89■□□□□ 0.13
Smim4Q8C1Q6 Gm16192-201ENSMUST00000148357 937 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
Smim4Q8C1Q6 Gm7160-202ENSMUST00000188519 1027 ntBASIC15.89■□□□□ 0.13
Smim4Q8C1Q6 Svbp-201ENSMUST00000030395 733 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Smim4Q8C1Q6 Gm3667-201ENSMUST00000171906 2053 ntAPPRIS P1 TSL 5 BASIC15.89■□□□□ 0.13
Smim4Q8C1Q6 Zyg11a-202ENSMUST00000106690 2421 ntAPPRIS ALT2 TSL 5 BASIC15.89■□□□□ 0.13
Smim4Q8C1Q6 Shroom3-211ENSMUST00000225438 5742 ntBASIC15.89■□□□□ 0.13
Smim4Q8C1Q6 Zfp771-201ENSMUST00000052509 1484 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Smim4Q8C1Q6 Tmem11-203ENSMUST00000168218 1511 ntTSL 2 BASIC15.89■□□□□ 0.13
Smim4Q8C1Q6 Vps26a-201ENSMUST00000092473 2712 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
Smim4Q8C1Q6 Gm10461-201ENSMUST00000202073 4786 ntBASIC15.88■□□□□ 0.13
Smim4Q8C1Q6 Wnt8a-201ENSMUST00000012426 1746 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Smim4Q8C1Q6 Trim72-202ENSMUST00000106248 2134 ntAPPRIS P1 TSL 5 BASIC15.88■□□□□ 0.13
Smim4Q8C1Q6 Ssfa2-203ENSMUST00000111788 4976 ntAPPRIS ALT2 TSL 5 BASIC15.88■□□□□ 0.13
Smim4Q8C1Q6 Gm12660-201ENSMUST00000123764 664 ntTSL 3 BASIC15.88■□□□□ 0.13
Smim4Q8C1Q6 Prr3-204ENSMUST00000172900 439 ntTSL 2 BASIC15.88■□□□□ 0.13
Smim4Q8C1Q6 Spr-203ENSMUST00000174769 1029 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
Smim4Q8C1Q6 1110065P20Rik-206ENSMUST00000185036 1223 ntTSL 2 BASIC15.88■□□□□ 0.13
Smim4Q8C1Q6 Fam168b-208ENSMUST00000191307 844 ntTSL 2 BASIC15.88■□□□□ 0.13
Smim4Q8C1Q6 AW047730-202ENSMUST00000181406 2579 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
Smim4Q8C1Q6 Lcorl-202ENSMUST00000045586 5708 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
Smim4Q8C1Q6 Tifa-201ENSMUST00000054483 2245 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Smim4Q8C1Q6 Klf3-201ENSMUST00000165536 5221 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Smim4Q8C1Q6 Ripply3-201ENSMUST00000023660 1531 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Smim4Q8C1Q6 Tuba1b-201ENSMUST00000077577 1743 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Smim4Q8C1Q6 Pllp-201ENSMUST00000034227 1926 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Smim4Q8C1Q6 Zbtb7c-202ENSMUST00000167921 2147 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Smim4Q8C1Q6 Arid1a-205ENSMUST00000145664 8187 ntAPPRIS ALT2 TSL 2 BASIC15.88■□□□□ 0.13
Smim4Q8C1Q6 Eif4h-205ENSMUST00000202622 2726 ntAPPRIS P3 TSL 1 (best) BASIC15.88■□□□□ 0.13
Smim4Q8C1Q6 Acot2-201ENSMUST00000021649 2196 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Smim4Q8C1Q6 Kcnq2-203ENSMUST00000081528 2382 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
Smim4Q8C1Q6 Jade1-202ENSMUST00000163764 5584 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
Smim4Q8C1Q6 Gse1-202ENSMUST00000118136 4492 ntAPPRIS ALT2 TSL 1 (best) BASIC15.87■□□□□ 0.13
Smim4Q8C1Q6 Hnrnpab-203ENSMUST00000109103 1437 ntAPPRIS ALT2 TSL 1 (best) BASIC15.87■□□□□ 0.13
Smim4Q8C1Q6 Kdelr3-201ENSMUST00000010974 1414 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Smim4Q8C1Q6 Sbspon-201ENSMUST00000040695 2748 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Smim4Q8C1Q6 9130221H12Rik-201ENSMUST00000169914 1465 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
Smim4Q8C1Q6 Letm1-201ENSMUST00000005431 5272 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Smim4Q8C1Q6 Jagn1-201ENSMUST00000101070 1201 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Smim4Q8C1Q6 Mrpl16-201ENSMUST00000167199 1122 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Retrieved 100 of 76,532 protein–RNA pairs in 22.1 ms