Protein–RNA interactions for Protein: P70441

Slc9a3r1, Na(+)/H(+) exchange regulatory cofactor NHE-RF1, mousemouse

Predictions only

Length 355 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc9a3r1P70441 Smad2-205ENSMUST00000168423 2857 ntAPPRIS P3 TSL 1 (best) BASIC18.22■□□□□ 0.51
Slc9a3r1P70441 Dao-201ENSMUST00000086599 1525 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
Slc9a3r1P70441 Sstr4-201ENSMUST00000109962 1424 ntAPPRIS P1 BASIC18.22■□□□□ 0.51
Slc9a3r1P70441 Clasp2-211ENSMUST00000216817 2234 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
Slc9a3r1P70441 Rfk-201ENSMUST00000025617 2482 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Slc9a3r1P70441 Mgat1-213ENSMUST00000167400 3151 ntAPPRIS P1 TSL 5 BASIC18.22■□□□□ 0.51
Slc9a3r1P70441 6820408C15Rik-201ENSMUST00000039961 1684 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Slc9a3r1P70441 Atoh8-201ENSMUST00000042646 2355 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Slc9a3r1P70441 Vstm2b-201ENSMUST00000044705 2627 ntAPPRIS P1 TSL 5 BASIC18.21■□□□□ 0.51
Slc9a3r1P70441 Disc1-204ENSMUST00000115885 2408 ntAPPRIS ALT2 TSL 5 BASIC18.21■□□□□ 0.51
Slc9a3r1P70441 Disc1-202ENSMUST00000075730 2408 ntAPPRIS P3 TSL 5 BASIC18.21■□□□□ 0.51
Slc9a3r1P70441 Mylip-201ENSMUST00000038275 3065 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Slc9a3r1P70441 Xkr6-201ENSMUST00000119973 2963 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Slc9a3r1P70441 Gm11691-201ENSMUST00000130963 658 ntTSL 2 BASIC18.21■□□□□ 0.51
Slc9a3r1P70441 Fam228b-205ENSMUST00000218575 1281 ntAPPRIS ALT2 TSL 2 BASIC18.21■□□□□ 0.51
Slc9a3r1P70441 Cetn3-201ENSMUST00000022009 1226 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Slc9a3r1P70441 Zfand3-202ENSMUST00000226208 923 ntAPPRIS P1 BASIC18.21■□□□□ 0.51
Slc9a3r1P70441 Rbks-201ENSMUST00000031018 1042 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Slc9a3r1P70441 Gm20100-201ENSMUST00000209418 2272 ntBASIC18.21■□□□□ 0.51
Slc9a3r1P70441 H2-Q7-201ENSMUST00000071951 1406 ntAPPRIS P2 TSL 1 (best) BASIC18.21■□□□□ 0.51
Slc9a3r1P70441 Atmin-201ENSMUST00000109099 4877 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.5
Slc9a3r1P70441 Cyp2r1-207ENSMUST00000211506 1887 ntTSL 5 BASIC18.2■□□□□ 0.5
Slc9a3r1P70441 Uba2-201ENSMUST00000102746 2579 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Slc9a3r1P70441 Pias2-202ENSMUST00000114777 4968 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Slc9a3r1P70441 Rpusd3-202ENSMUST00000113092 1269 ntAPPRIS P2 TSL 1 (best) BASIC18.2■□□□□ 0.5
Slc9a3r1P70441 Gm42555-201ENSMUST00000199304 1039 ntBASIC18.2■□□□□ 0.5
Slc9a3r1P70441 Gm46218-201ENSMUST00000215448 801 ntTSL 5 BASIC18.2■□□□□ 0.5
Slc9a3r1P70441 Rasef-203ENSMUST00000222414 2127 ntAPPRIS P1 TSL 5 BASIC18.2■□□□□ 0.5
Slc9a3r1P70441 Iqsec1-210ENSMUST00000212100 3500 ntTSL 5 BASIC18.2■□□□□ 0.5
Slc9a3r1P70441 Xk-201ENSMUST00000015486 5076 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Slc9a3r1P70441 Arhgap8-201ENSMUST00000006029 1527 ntAPPRIS P1 TSL 5 BASIC18.19■□□□□ 0.5
Slc9a3r1P70441 Kdm3b-201ENSMUST00000043775 6363 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Slc9a3r1P70441 Sco2-201ENSMUST00000167643 1143 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Slc9a3r1P70441 Rian-206ENSMUST00000182119 329 ntTSL 3 BASIC18.19■□□□□ 0.5
Slc9a3r1P70441 Anapc13-204ENSMUST00000190279 589 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Slc9a3r1P70441 Gab1-201ENSMUST00000034150 4870 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Slc9a3r1P70441 Ly6h-204ENSMUST00000127095 1336 ntAPPRIS P3 TSL 1 (best) BASIC18.19■□□□□ 0.5
Slc9a3r1P70441 Bspry-202ENSMUST00000107449 2167 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
Slc9a3r1P70441 Ttc39a-203ENSMUST00000106619 1778 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Slc9a3r1P70441 Rbm7-201ENSMUST00000170000 1773 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Slc9a3r1P70441 Trmt61a-202ENSMUST00000168338 2131 ntAPPRIS P1 TSL 5 BASIC18.18■□□□□ 0.5
Slc9a3r1P70441 Gm6420-201ENSMUST00000193885 723 ntBASIC18.18■□□□□ 0.5
Slc9a3r1P70441 Areg-201ENSMUST00000031325 1215 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Slc9a3r1P70441 A930018P22Rik-201ENSMUST00000040374 822 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Slc9a3r1P70441 Schip1-205ENSMUST00000182532 2059 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Slc9a3r1P70441 Rab34-202ENSMUST00000056241 1558 ntTSL 5 BASIC18.17■□□□□ 0.5
Slc9a3r1P70441 Kirrel3-202ENSMUST00000115148 2851 ntAPPRIS P3 TSL 5 BASIC18.17■□□□□ 0.5
Slc9a3r1P70441 Siah1b-201ENSMUST00000037928 1783 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Slc9a3r1P70441 Scarb1-201ENSMUST00000086075 2521 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Slc9a3r1P70441 Cers1-203ENSMUST00000165819 2728 ntAPPRIS P4 TSL 1 (best) BASIC18.17■□□□□ 0.5
Slc9a3r1P70441 Gm16933-201ENSMUST00000141741 2169 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Slc9a3r1P70441 Ube4b-202ENSMUST00000103212 5626 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Slc9a3r1P70441 Mrps16-201ENSMUST00000061444 2572 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Slc9a3r1P70441 Mark2-207ENSMUST00000165286 2975 ntAPPRIS ALT2 TSL 5 BASIC18.17■□□□□ 0.5
Slc9a3r1P70441 Gm7860-201ENSMUST00000121190 879 ntBASIC18.17■□□□□ 0.5
Slc9a3r1P70441 Mir5133-201ENSMUST00000174955 77 ntBASIC18.17■□□□□ 0.5
Slc9a3r1P70441 AC112142.1-201ENSMUST00000228796 918 ntBASIC18.17■□□□□ 0.5
Slc9a3r1P70441 Ung-202ENSMUST00000102584 2136 ntAPPRIS P3 TSL 1 (best) BASIC18.17■□□□□ 0.5
Slc9a3r1P70441 H2-Q7-203ENSMUST00000078205 1419 ntTSL 5 BASIC18.16■□□□□ 0.5
Slc9a3r1P70441 Brsk2-205ENSMUST00000172652 2501 ntTSL 5 BASIC18.16■□□□□ 0.5
Slc9a3r1P70441 Rab7-202ENSMUST00000113596 1657 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Slc9a3r1P70441 3110082J24Rik-201ENSMUST00000127749 327 ntAPPRIS P1 TSL 5 BASIC18.16■□□□□ 0.5
Slc9a3r1P70441 Gm44210-201ENSMUST00000205253 713 ntTSL 3 BASIC18.16■□□□□ 0.5
Slc9a3r1P70441 Ap4s1-201ENSMUST00000021338 1035 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Slc9a3r1P70441 Zfp213-201ENSMUST00000095606 2672 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Slc9a3r1P70441 Cbfb-202ENSMUST00000109392 2891 ntAPPRIS ALT1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Slc9a3r1P70441 Nrxn2-201ENSMUST00000077182 6059 ntAPPRIS ALT2 TSL 5 BASIC18.15■□□□□ 0.5
Slc9a3r1P70441 Polg2-201ENSMUST00000021060 1506 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Slc9a3r1P70441 1700030C12Rik-201ENSMUST00000101462 858 ntTSL 5 BASIC18.15■□□□□ 0.5
Slc9a3r1P70441 Rbm39-202ENSMUST00000109584 667 ntTSL 5 BASIC18.15■□□□□ 0.5
Slc9a3r1P70441 Gm15155-201ENSMUST00000112542 1009 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Slc9a3r1P70441 Gm13534-201ENSMUST00000121169 513 ntBASIC18.15■□□□□ 0.5
Slc9a3r1P70441 Gm53-201ENSMUST00000129907 1172 ntTSL 2 BASIC18.15■□□□□ 0.5
Slc9a3r1P70441 Nespas-201ENSMUST00000143738 1083 ntBASIC18.15■□□□□ 0.5
Slc9a3r1P70441 Gm27011-201ENSMUST00000182352 972 ntBASIC18.15■□□□□ 0.5
Slc9a3r1P70441 AC167978.1-201ENSMUST00000182488 456 ntTSL 3 BASIC18.15■□□□□ 0.5
Slc9a3r1P70441 Ypel3-201ENSMUST00000038614 973 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Slc9a3r1P70441 Tmem250-ps-201ENSMUST00000133808 2483 ntTSL 2 BASIC18.15■□□□□ 0.5
Slc9a3r1P70441 Htatip2-202ENSMUST00000207895 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
Slc9a3r1P70441 Gpn2-201ENSMUST00000030661 1367 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Slc9a3r1P70441 Ppp1r16a-201ENSMUST00000037551 2692 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Slc9a3r1P70441 Pacsin2-201ENSMUST00000056177 2795 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.5
Slc9a3r1P70441 Dhx33-204ENSMUST00000124464 1835 ntTSL 5 BASIC18.14■□□□□ 0.5
Slc9a3r1P70441 Kndc1-202ENSMUST00000121839 2210 ntTSL 2 BASIC18.14■□□□□ 0.49
Slc9a3r1P70441 Nkx2-1-202ENSMUST00000178477 2242 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Slc9a3r1P70441 Lrp8-204ENSMUST00000106733 3332 ntAPPRIS ALT2 TSL 5 BASIC18.14■□□□□ 0.49
Slc9a3r1P70441 Ntn5-201ENSMUST00000107742 1574 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
Slc9a3r1P70441 Tecr-203ENSMUST00000165740 1120 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
Slc9a3r1P70441 Fxyd1-215ENSMUST00000206474 572 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Slc9a3r1P70441 Nudt14-202ENSMUST00000221397 1241 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Slc9a3r1P70441 Hist1h2ap-201ENSMUST00000081342 482 ntAPPRIS P1 BASIC18.14■□□□□ 0.49
Slc9a3r1P70441 Hoxb6-201ENSMUST00000000704 1321 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Slc9a3r1P70441 Kansl1-205ENSMUST00000106977 5510 ntAPPRIS P2 TSL 1 (best) BASIC18.14■□□□□ 0.49
Slc9a3r1P70441 Gm26837-201ENSMUST00000180821 2110 ntTSL 5 BASIC18.14■□□□□ 0.49
Slc9a3r1P70441 Ltbr-201ENSMUST00000032489 2107 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Slc9a3r1P70441 Schip1-206ENSMUST00000182719 2156 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
Slc9a3r1P70441 Pbx1-206ENSMUST00000176790 1828 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
Slc9a3r1P70441 Ddost-201ENSMUST00000030538 2120 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Slc9a3r1P70441 Maml1-201ENSMUST00000059458 5528 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Slc9a3r1P70441 Mreg-201ENSMUST00000048860 2284 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Retrieved 100 of 76,532 protein–RNA pairs in 15.3 ms