Protein–RNA interactions for Protein: Q9EQM3

Nkx2-4, Homeobox protein Nkx-2.4, mousemouse

Predictions only

Length 354 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx2-4Q9EQM3 Coa6-201ENSMUST00000059093 747 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Nkx2-4Q9EQM3 Btbd2-202ENSMUST00000126980 2449 ntAPPRIS ALT2 TSL 5 BASIC19.75■□□□□ 0.75
Nkx2-4Q9EQM3 Gm30003-201ENSMUST00000200700 1433 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
Nkx2-4Q9EQM3 Gm2399-201ENSMUST00000104944 225 ntBASIC19.74■□□□□ 0.75
Nkx2-4Q9EQM3 2210408F21Rik-204ENSMUST00000136571 478 ntTSL 3 BASIC19.74■□□□□ 0.75
Nkx2-4Q9EQM3 Tnfaip8l2-201ENSMUST00000013851 1122 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Nkx2-4Q9EQM3 Gm20472-201ENSMUST00000174403 1240 ntBASIC19.74■□□□□ 0.75
Nkx2-4Q9EQM3 2510002D24Rik-204ENSMUST00000191388 995 ntTSL 5 BASIC19.74■□□□□ 0.75
Nkx2-4Q9EQM3 Id1-201ENSMUST00000038368 934 ntAPPRIS P2 TSL 1 (best) BASIC19.74■□□□□ 0.75
Nkx2-4Q9EQM3 H2-Eb1-201ENSMUST00000074557 1184 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Nkx2-4Q9EQM3 Gm7579-201ENSMUST00000097943 732 ntAPPRIS P1 BASIC19.74■□□□□ 0.75
Nkx2-4Q9EQM3 Mau2-206ENSMUST00000212451 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC19.74■□□□□ 0.75
Nkx2-4Q9EQM3 Suz12-206ENSMUST00000163272 4303 ntAPPRIS ALT2 TSL 5 BASIC19.74■□□□□ 0.75
Nkx2-4Q9EQM3 Grin2d-203ENSMUST00000211713 5244 ntAPPRIS P1 TSL 5 BASIC19.74■□□□□ 0.75
Nkx2-4Q9EQM3 Pdpk1-205ENSMUST00000115411 1724 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
Nkx2-4Q9EQM3 Gm13441-201ENSMUST00000140104 1168 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
Nkx2-4Q9EQM3 Gm11527-201ENSMUST00000153795 596 ntTSL 2 BASIC19.73■□□□□ 0.75
Nkx2-4Q9EQM3 Espn-202ENSMUST00000049305 1142 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
Nkx2-4Q9EQM3 Odf1-201ENSMUST00000081966 1105 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Nkx2-4Q9EQM3 Rcl1-201ENSMUST00000064393 1803 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Nkx2-4Q9EQM3 March11-202ENSMUST00000140840 1558 ntAPPRIS P3 TSL 2 BASIC19.73■□□□□ 0.75
Nkx2-4Q9EQM3 Fah-201ENSMUST00000032865 1585 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Nkx2-4Q9EQM3 Spint1-201ENSMUST00000028783 2273 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Nkx2-4Q9EQM3 4930518J20Rik-201ENSMUST00000195064 1478 ntBASIC19.73■□□□□ 0.75
Nkx2-4Q9EQM3 Fbxo27-203ENSMUST00000108281 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
Nkx2-4Q9EQM3 Tfg-201ENSMUST00000065515 1945 ntAPPRIS P2 TSL 1 (best) BASIC19.72■□□□□ 0.75
Nkx2-4Q9EQM3 Slc35f4-201ENSMUST00000074368 1931 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Nkx2-4Q9EQM3 Scn1b-203ENSMUST00000211945 1501 ntAPPRIS P1 TSL 5 BASIC19.72■□□□□ 0.75
Nkx2-4Q9EQM3 Smyd2-201ENSMUST00000027897 1680 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Nkx2-4Q9EQM3 Snca-201ENSMUST00000114268 1280 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Nkx2-4Q9EQM3 Arrdc4-202ENSMUST00000118110 1129 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
Nkx2-4Q9EQM3 Josd2-205ENSMUST00000120852 727 ntAPPRIS P1 TSL 3 BASIC19.72■□□□□ 0.75
Nkx2-4Q9EQM3 Gm20390-201ENSMUST00000170303 991 ntAPPRIS P1 TSL 5 BASIC19.72■□□□□ 0.75
Nkx2-4Q9EQM3 Gm44549-201ENSMUST00000208351 577 ntBASIC19.72■□□□□ 0.75
Nkx2-4Q9EQM3 Sec11c-201ENSMUST00000025394 807 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Nkx2-4Q9EQM3 Crybb1-201ENSMUST00000031286 882 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Nkx2-4Q9EQM3 Crabp1-201ENSMUST00000034830 802 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Nkx2-4Q9EQM3 Pdlim5-202ENSMUST00000058626 873 ntTSL 5 BASIC19.72■□□□□ 0.75
Nkx2-4Q9EQM3 Ltk-206ENSMUST00000182203 2232 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
Nkx2-4Q9EQM3 CT010444.2-201ENSMUST00000217877 1629 ntBASIC19.72■□□□□ 0.75
Nkx2-4Q9EQM3 Arhgef25-205ENSMUST00000218654 2475 ntTSL 5 BASIC19.71■□□□□ 0.75
Nkx2-4Q9EQM3 Neurl4-211ENSMUST00000177138 4886 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
Nkx2-4Q9EQM3 Tmem80-206ENSMUST00000133012 1524 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Nkx2-4Q9EQM3 Tax1bp3-201ENSMUST00000040687 1523 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Nkx2-4Q9EQM3 Nkx2-1-202ENSMUST00000178477 2242 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Nkx2-4Q9EQM3 Kif27-203ENSMUST00000225388 5121 ntAPPRIS P1 BASIC19.71■□□□□ 0.75
Nkx2-4Q9EQM3 Senp6-201ENSMUST00000037484 5111 ntAPPRIS P3 TSL 1 (best) BASIC19.71■□□□□ 0.75
Nkx2-4Q9EQM3 Ccl27a-219ENSMUST00000173865 657 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
Nkx2-4Q9EQM3 Paox-202ENSMUST00000097967 1024 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
Nkx2-4Q9EQM3 Tinagl1-202ENSMUST00000105998 1976 ntAPPRIS P2 TSL 1 (best) BASIC19.71■□□□□ 0.75
Nkx2-4Q9EQM3 Gm6802-201ENSMUST00000167843 1983 ntBASIC19.71■□□□□ 0.75
Nkx2-4Q9EQM3 Rbmxl1-201ENSMUST00000049245 1695 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Nkx2-4Q9EQM3 Gm15043-201ENSMUST00000118843 1543 ntBASIC19.71■□□□□ 0.75
Nkx2-4Q9EQM3 Ldb1-202ENSMUST00000056931 2295 ntAPPRIS P2 TSL 1 (best) BASIC19.71■□□□□ 0.75
Nkx2-4Q9EQM3 Car11-201ENSMUST00000003360 1585 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Nkx2-4Q9EQM3 Phf12-202ENSMUST00000108360 3047 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
Nkx2-4Q9EQM3 Prlh-201ENSMUST00000166281 276 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Nkx2-4Q9EQM3 2310033P09Rik-201ENSMUST00000020719 1285 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Nkx2-4Q9EQM3 Aga-203ENSMUST00000211424 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
Nkx2-4Q9EQM3 Fgfr1op2-202ENSMUST00000058245 918 ntTSL 2 BASIC19.7■□□□□ 0.74
Nkx2-4Q9EQM3 Snx12-201ENSMUST00000077876 1002 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
Nkx2-4Q9EQM3 Puf60-202ENSMUST00000100527 1878 ntAPPRIS P4 TSL 1 (best) BASIC19.7■□□□□ 0.74
Nkx2-4Q9EQM3 Dus1l-203ENSMUST00000106135 1863 ntAPPRIS ALT2 TSL 5 BASIC19.7■□□□□ 0.74
Nkx2-4Q9EQM3 Ap1ar-201ENSMUST00000051737 2662 ntAPPRIS P1 TSL 3 BASIC19.7■□□□□ 0.74
Nkx2-4Q9EQM3 Dbf4-201ENSMUST00000002368 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
Nkx2-4Q9EQM3 Arhgap23-201ENSMUST00000093940 2409 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
Nkx2-4Q9EQM3 Usp48-205ENSMUST00000105840 5741 ntAPPRIS P1 TSL 5 BASIC19.69■□□□□ 0.74
Nkx2-4Q9EQM3 Htra2-203ENSMUST00000113963 1629 ntTSL 5 BASIC19.69■□□□□ 0.74
Nkx2-4Q9EQM3 Kif1bp-206ENSMUST00000162525 2311 ntTSL 5 BASIC19.69■□□□□ 0.74
Nkx2-4Q9EQM3 Mdfi-202ENSMUST00000066368 1711 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Nkx2-4Q9EQM3 Arpc4-202ENSMUST00000171058 695 ntTSL 5 BASIC19.69■□□□□ 0.74
Nkx2-4Q9EQM3 Bmyc-201ENSMUST00000061483 983 ntAPPRIS P1 BASIC19.69■□□□□ 0.74
Nkx2-4Q9EQM3 Mtfmt-201ENSMUST00000074792 2042 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Nkx2-4Q9EQM3 Arid3c-202ENSMUST00000150809 1327 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
Nkx2-4Q9EQM3 Hoxc6-201ENSMUST00000001711 1581 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Nkx2-4Q9EQM3 Cdc16-201ENSMUST00000043962 2301 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Nkx2-4Q9EQM3 Ing2-201ENSMUST00000080353 2812 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Nkx2-4Q9EQM3 Ypel1-201ENSMUST00000035682 3322 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Nkx2-4Q9EQM3 Magi2-201ENSMUST00000088516 4843 ntAPPRIS P2 TSL 5 BASIC19.69■□□□□ 0.74
Nkx2-4Q9EQM3 Pacsin3-215ENSMUST00000168916 1859 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Nkx2-4Q9EQM3 Pacsin3-201ENSMUST00000028694 1862 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Nkx2-4Q9EQM3 5031439G07Rik-201ENSMUST00000047144 6845 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Nkx2-4Q9EQM3 Slc1a5-201ENSMUST00000108496 2764 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Nkx2-4Q9EQM3 Adap2-201ENSMUST00000021050 1785 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Nkx2-4Q9EQM3 Tor2a-201ENSMUST00000009707 1536 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Nkx2-4Q9EQM3 Pou3f3-201ENSMUST00000054883 7409 ntAPPRIS P1 BASIC19.68■□□□□ 0.74
Nkx2-4Q9EQM3 Gmcl1-202ENSMUST00000113679 960 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
Nkx2-4Q9EQM3 H2-K2-201ENSMUST00000174250 1049 ntBASIC19.68■□□□□ 0.74
Nkx2-4Q9EQM3 Gm20695-202ENSMUST00000176233 1012 ntAPPRIS P1 TSL 5 BASIC19.68■□□□□ 0.74
Nkx2-4Q9EQM3 Ankrd39-202ENSMUST00000194894 664 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
Nkx2-4Q9EQM3 1600023N17Rik-201ENSMUST00000196242 1007 ntBASIC19.68■□□□□ 0.74
Nkx2-4Q9EQM3 AC061963.1-203ENSMUST00000213473 453 ntTSL 3 BASIC19.68■□□□□ 0.74
Nkx2-4Q9EQM3 Cmtm7-201ENSMUST00000035009 993 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Nkx2-4Q9EQM3 L3mbtl4-201ENSMUST00000093007 2445 ntAPPRIS P1 TSL 5 BASIC19.68■□□□□ 0.74
Nkx2-4Q9EQM3 Acvrl1-202ENSMUST00000117984 1852 ntAPPRIS P1 TSL 5 BASIC19.68■□□□□ 0.74
Nkx2-4Q9EQM3 Meg3-207ENSMUST00000143836 1896 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
Nkx2-4Q9EQM3 Schip1-206ENSMUST00000182719 2156 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
Nkx2-4Q9EQM3 Gorasp2-201ENSMUST00000028509 2238 ntAPPRIS P2 TSL 1 (best) BASIC19.68■□□□□ 0.74
Nkx2-4Q9EQM3 Matr3-209ENSMUST00000188275 1951 ntTSL 5 BASIC19.68■□□□□ 0.74
Nkx2-4Q9EQM3 Dusp12-201ENSMUST00000027970 1374 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Retrieved 100 of 76,532 protein–RNA pairs in 66.2 ms