Protein–RNA interactions for Protein: Q91VN6

Ddx41, Probable ATP-dependent RNA helicase DDX41, mousemouse

Known RBP Predictions only

Length 622 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx41Q91VN6 Shisa7-203ENSMUST00000119433 3481 ntAPPRIS P2 TSL 1 (best) BASIC21.89■■□□□ 1.09
Ddx41Q91VN6 Dda1-202ENSMUST00000124745 1933 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
Ddx41Q91VN6 Espn-205ENSMUST00000084114 1645 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
Ddx41Q91VN6 Hsd17b2-201ENSMUST00000034304 1320 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
Ddx41Q91VN6 Zmiz2-201ENSMUST00000012612 4199 ntAPPRIS P2 TSL 5 BASIC21.88■■□□□ 1.09
Ddx41Q91VN6 Ccdc85b-201ENSMUST00000179549 609 ntAPPRIS P1 BASIC21.88■■□□□ 1.09
Ddx41Q91VN6 Ccdc84-211ENSMUST00000217270 681 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
Ddx41Q91VN6 Arl10-201ENSMUST00000026988 1046 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
Ddx41Q91VN6 Rras-201ENSMUST00000044111 995 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
Ddx41Q91VN6 Memo1-201ENSMUST00000078459 1513 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
Ddx41Q91VN6 Col9a3-203ENSMUST00000132527 3046 ntAPPRIS P1 TSL 5 BASIC21.88■■□□□ 1.09
Ddx41Q91VN6 Slc9a2-201ENSMUST00000027231 5019 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
Ddx41Q91VN6 M5C1000I18Rik-202ENSMUST00000186205 1414 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
Ddx41Q91VN6 Reep4-203ENSMUST00000226563 1444 ntBASIC21.88■■□□□ 1.09
Ddx41Q91VN6 Picalm-215ENSMUST00000209068 3511 ntAPPRIS ALT2 TSL 5 BASIC21.88■■□□□ 1.09
Ddx41Q91VN6 AU022751-201ENSMUST00000101698 1838 ntAPPRIS ALT2 TSL 1 (best) BASIC21.87■■□□□ 1.09
Ddx41Q91VN6 Rnf26-201ENSMUST00000056328 2724 ntAPPRIS P2 BASIC21.87■■□□□ 1.09
Ddx41Q91VN6 Mgat5b-201ENSMUST00000103027 4258 ntAPPRIS P1 TSL 5 BASIC21.87■■□□□ 1.09
Ddx41Q91VN6 Rhbdf1-201ENSMUST00000020524 2946 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
Ddx41Q91VN6 Sept4-206ENSMUST00000122067 1303 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
Ddx41Q91VN6 Olfr94-201ENSMUST00000055324 1304 ntAPPRIS P2 BASIC21.87■■□□□ 1.09
Ddx41Q91VN6 Rhoq-201ENSMUST00000024956 4151 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
Ddx41Q91VN6 Kif27-203ENSMUST00000225388 5121 ntAPPRIS P1 BASIC21.87■■□□□ 1.09
Ddx41Q91VN6 Gm13234-201ENSMUST00000120010 747 ntBASIC21.87■■□□□ 1.09
Ddx41Q91VN6 Lmo1-201ENSMUST00000036992 1282 ntAPPRIS P3 TSL 1 (best) BASIC21.87■■□□□ 1.09
Ddx41Q91VN6 H2-Ab1-201ENSMUST00000040828 1211 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
Ddx41Q91VN6 Hist1h2ao-201ENSMUST00000091745 480 ntAPPRIS P1 BASIC21.87■■□□□ 1.09
Ddx41Q91VN6 Cers1-202ENSMUST00000140239 2711 ntAPPRIS ALT2 TSL 1 (best) BASIC21.87■■□□□ 1.09
Ddx41Q91VN6 Cacnb1-202ENSMUST00000092736 1880 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
Ddx41Q91VN6 Krt82-201ENSMUST00000023713 2087 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
Ddx41Q91VN6 Def6-201ENSMUST00000002327 2277 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
Ddx41Q91VN6 1700003E16Rik-201ENSMUST00000032106 2020 ntAPPRIS P1 TSL 5 BASIC21.87■■□□□ 1.09
Ddx41Q91VN6 Gm15645-201ENSMUST00000131504 2208 ntTSL 5 BASIC21.87■■□□□ 1.09
Ddx41Q91VN6 B130046B21Rik-201ENSMUST00000181510 2216 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
Ddx41Q91VN6 Rnf32-204ENSMUST00000160246 1565 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
Ddx41Q91VN6 Tnks2-201ENSMUST00000025729 6481 ntAPPRIS P1 TSL 5 BASIC21.87■■□□□ 1.09
Ddx41Q91VN6 Psme4-201ENSMUST00000041231 6491 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
Ddx41Q91VN6 Tex264-202ENSMUST00000163441 1896 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
Ddx41Q91VN6 Anapc5-218ENSMUST00000200645 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC21.86■■□□□ 1.09
Ddx41Q91VN6 Dbf4-201ENSMUST00000002368 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC21.86■■□□□ 1.09
Ddx41Q91VN6 Impa2-201ENSMUST00000025403 1661 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
Ddx41Q91VN6 Hoxa11os-201ENSMUST00000134512 1839 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
Ddx41Q91VN6 Pthlh-201ENSMUST00000052296 1603 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
Ddx41Q91VN6 Ptger3-202ENSMUST00000173533 2097 ntAPPRIS ALT2 TSL 1 (best) BASIC21.86■■□□□ 1.09
Ddx41Q91VN6 Atoh8-201ENSMUST00000042646 2355 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
Ddx41Q91VN6 Reep6-207ENSMUST00000186864 2015 ntAPPRIS P3 TSL 1 (best) BASIC21.85■■□□□ 1.09
Ddx41Q91VN6 Klf16-201ENSMUST00000038558 2674 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
Ddx41Q91VN6 Anapc5-205ENSMUST00000197074 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC21.85■■□□□ 1.09
Ddx41Q91VN6 Anapc5-212ENSMUST00000199406 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC21.85■■□□□ 1.09
Ddx41Q91VN6 Cdkl3-207ENSMUST00000109080 2749 ntAPPRIS ALT2 TSL 1 (best) BASIC21.85■■□□□ 1.09
Ddx41Q91VN6 Stx6-209ENSMUST00000195302 955 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
Ddx41Q91VN6 Cmtm7-204ENSMUST00000216760 665 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
Ddx41Q91VN6 Oxld1-201ENSMUST00000044007 813 ntAPPRIS P2 TSL 1 (best) BASIC21.85■■□□□ 1.09
Ddx41Q91VN6 Gas2-203ENSMUST00000107591 2232 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
Ddx41Q91VN6 Nsmf-205ENSMUST00000114386 2685 ntTSL 5 BASIC21.85■■□□□ 1.09
Ddx41Q91VN6 Zfp467-202ENSMUST00000114556 2287 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
Ddx41Q91VN6 Tmem44-204ENSMUST00000140402 2405 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
Ddx41Q91VN6 Ipmk-201ENSMUST00000079252 5447 ntAPPRIS P3 TSL 1 (best) BASIC21.85■■□□□ 1.09
Ddx41Q91VN6 Schip1-205ENSMUST00000182532 2059 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
Ddx41Q91VN6 Fam49b-202ENSMUST00000164532 1770 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
Ddx41Q91VN6 Cant1-205ENSMUST00000106289 1600 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
Ddx41Q91VN6 Creb3l1-201ENSMUST00000028663 2603 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
Ddx41Q91VN6 Polr2j-202ENSMUST00000111127 900 ntTSL 2 BASIC21.84■■□□□ 1.09
Ddx41Q91VN6 1700017B05Rik-204ENSMUST00000215298 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC21.84■■□□□ 1.09
Ddx41Q91VN6 Lsm2-201ENSMUST00000007266 873 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
Ddx41Q91VN6 Vkorc1l1-202ENSMUST00000073945 650 ntTSL 2 BASIC21.84■■□□□ 1.09
Ddx41Q91VN6 Iars2-203ENSMUST00000110975 2801 ntTSL 5 BASIC21.84■■□□□ 1.09
Ddx41Q91VN6 Hcn2-201ENSMUST00000020581 3089 ntAPPRIS P1 TSL 5 BASIC21.84■■□□□ 1.09
Ddx41Q91VN6 Gse1-202ENSMUST00000118136 4492 ntAPPRIS ALT2 TSL 1 (best) BASIC21.84■■□□□ 1.09
Ddx41Q91VN6 Clta-202ENSMUST00000107846 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC21.83■■□□□ 1.09
Ddx41Q91VN6 Gm26682-201ENSMUST00000180850 1729 ntTSL 1 (best) BASIC21.83■■□□□ 1.09
Ddx41Q91VN6 Ccdc84-201ENSMUST00000053286 1725 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
Ddx41Q91VN6 Gfra4-205ENSMUST00000110239 810 ntAPPRIS ALT2 TSL 1 (best) BASIC21.83■■□□□ 1.09
Ddx41Q91VN6 Erh-205ENSMUST00000218740 981 ntTSL 2 BASIC21.83■■□□□ 1.09
Ddx41Q91VN6 Baiap2-201ENSMUST00000026436 2394 ntAPPRIS P4 TSL 1 (best) BASIC21.83■■□□□ 1.08
Ddx41Q91VN6 Stoml2-201ENSMUST00000030169 1874 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.08
Ddx41Q91VN6 Pomgnt1-203ENSMUST00000106498 2719 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.08
Ddx41Q91VN6 Luc7l2-201ENSMUST00000057692 2702 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.08
Ddx41Q91VN6 Map4k3-201ENSMUST00000025089 4225 ntAPPRIS P2 TSL 5 BASIC21.82■■□□□ 1.08
Ddx41Q91VN6 Tmem123-201ENSMUST00000052865 2907 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
Ddx41Q91VN6 Elavl1-201ENSMUST00000098950 5743 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
Ddx41Q91VN6 Cadm1-201ENSMUST00000034581 1254 ntAPPRIS ALT1 TSL 1 (best) BASIC21.82■■□□□ 1.08
Ddx41Q91VN6 E130116L18Rik-201ENSMUST00000066954 306 ntAPPRIS P1 BASIC21.82■■□□□ 1.08
Ddx41Q91VN6 Rab40c-207ENSMUST00000167626 2506 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
Ddx41Q91VN6 Nsmf-204ENSMUST00000102931 2830 ntTSL 5 BASIC21.82■■□□□ 1.08
Ddx41Q91VN6 1700105P06Rik-201ENSMUST00000186160 1772 ntBASIC21.82■■□□□ 1.08
Ddx41Q91VN6 Dus1l-203ENSMUST00000106135 1863 ntAPPRIS ALT2 TSL 5 BASIC21.81■■□□□ 1.08
Ddx41Q91VN6 Ercc6l2-208ENSMUST00000144763 1820 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
Ddx41Q91VN6 Speg-206ENSMUST00000122266 917 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
Ddx41Q91VN6 Tmem234-215ENSMUST00000173758 453 ntTSL 2 BASIC21.81■■□□□ 1.08
Ddx41Q91VN6 D830036C21Rik-201ENSMUST00000207444 453 ntTSL 3 BASIC21.81■■□□□ 1.08
Ddx41Q91VN6 Wasl-202ENSMUST00000041737 1298 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
Ddx41Q91VN6 Cystm1-201ENSMUST00000050584 831 ntAPPRIS ALT2 TSL 1 (best) BASIC21.81■■□□□ 1.08
Ddx41Q91VN6 Tmem250-ps-201ENSMUST00000133808 2483 ntTSL 2 BASIC21.81■■□□□ 1.08
Ddx41Q91VN6 A930001C03Rik-204ENSMUST00000154407 1402 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
Ddx41Q91VN6 Foxd1-201ENSMUST00000105098 5064 ntAPPRIS P1 BASIC21.8■■□□□ 1.08
Ddx41Q91VN6 Ccdc102a-201ENSMUST00000077955 2304 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
Ddx41Q91VN6 Elac2-201ENSMUST00000071891 2771 ntAPPRIS P2 TSL 1 (best) BASIC21.8■■□□□ 1.08
Ddx41Q91VN6 Nrxn2-208ENSMUST00000137166 6314 ntAPPRIS ALT2 TSL 5 BASIC21.8■■□□□ 1.08
Ddx41Q91VN6 Myef2-209ENSMUST00000152367 2071 ntAPPRIS P4 TSL 1 (best) BASIC21.8■■□□□ 1.08
Retrieved 100 of 76,532 protein–RNA pairs in 22.2 ms