Protein–RNA interactions for Protein: Q8CDD9

Lrif1, Ligand-dependent nuclear receptor-interacting factor 1, mousemouse

Predictions only

Length 755 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lrif1Q8CDD9 Nmnat3-202ENSMUST00000112937 1898 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
Lrif1Q8CDD9 Anks1b-217ENSMUST00000182550 1868 ntTSL 5 BASIC18.89■□□□□ 0.61
Lrif1Q8CDD9 Kmt5b-201ENSMUST00000005518 1283 ntAPPRIS ALT2 TSL 5 BASIC18.89■□□□□ 0.61
Lrif1Q8CDD9 BC017158-201ENSMUST00000033044 2627 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Lrif1Q8CDD9 Nubp1-201ENSMUST00000023146 2121 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Lrif1Q8CDD9 Gm45606-201ENSMUST00000209836 2795 ntBASIC18.88■□□□□ 0.61
Lrif1Q8CDD9 Oxsr1-201ENSMUST00000040853 4647 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Lrif1Q8CDD9 Smarcad1-201ENSMUST00000031984 5168 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Lrif1Q8CDD9 Nkx2-1-202ENSMUST00000178477 2242 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Lrif1Q8CDD9 Gm9885-202ENSMUST00000186234 2209 ntBASIC18.88■□□□□ 0.61
Lrif1Q8CDD9 Gm44832-201ENSMUST00000208849 2303 ntBASIC18.88■□□□□ 0.61
Lrif1Q8CDD9 Kcnk15-201ENSMUST00000044798 1199 ntAPPRIS P2 TSL 1 (best) BASIC18.88■□□□□ 0.61
Lrif1Q8CDD9 Mblac1-201ENSMUST00000057773 1308 ntAPPRIS P1 BASIC18.88■□□□□ 0.61
Lrif1Q8CDD9 Pxdc1-202ENSMUST00000053459 2684 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Lrif1Q8CDD9 Ppp1r3f-201ENSMUST00000115742 3066 ntAPPRIS P3 TSL 1 (best) BASIC18.88■□□□□ 0.61
Lrif1Q8CDD9 Dolk-201ENSMUST00000100219 2104 ntAPPRIS P1 BASIC18.88■□□□□ 0.61
Lrif1Q8CDD9 Foxp1-230ENSMUST00000177437 2468 ntAPPRIS P2 TSL 1 (best) BASIC18.88■□□□□ 0.61
Lrif1Q8CDD9 Ezh2-204ENSMUST00000114618 2775 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
Lrif1Q8CDD9 Map3k9-201ENSMUST00000035987 4564 ntAPPRIS P2 TSL 1 (best) BASIC18.87■□□□□ 0.61
Lrif1Q8CDD9 Cyth2-202ENSMUST00000107729 2519 ntAPPRIS P2 TSL 1 (best) BASIC18.87■□□□□ 0.61
Lrif1Q8CDD9 Klc3-203ENSMUST00000108458 1823 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
Lrif1Q8CDD9 Gm12821-201ENSMUST00000120022 600 ntBASIC18.87■□□□□ 0.61
Lrif1Q8CDD9 Atp10a-201ENSMUST00000168747 5419 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Lrif1Q8CDD9 A730056A06Rik-201ENSMUST00000181299 2689 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
Lrif1Q8CDD9 Galnt3-201ENSMUST00000028378 3885 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Lrif1Q8CDD9 Ciapin1-201ENSMUST00000034233 1807 ntAPPRIS P1 TSL 5 BASIC18.87■□□□□ 0.61
Lrif1Q8CDD9 Chst7-201ENSMUST00000044138 2206 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Lrif1Q8CDD9 Bicdl2-201ENSMUST00000062967 1913 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Lrif1Q8CDD9 Slc9a6-201ENSMUST00000077741 4976 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Lrif1Q8CDD9 Hoxa10-202ENSMUST00000125581 2565 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
Lrif1Q8CDD9 Ube2d2a-201ENSMUST00000167406 2393 ntAPPRIS P1 TSL 5 BASIC18.86■□□□□ 0.61
Lrif1Q8CDD9 Mgme1-203ENSMUST00000110028 2308 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Lrif1Q8CDD9 Magi2-203ENSMUST00000115267 4478 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Lrif1Q8CDD9 Gm42939-201ENSMUST00000197514 2205 ntBASIC18.86■□□□□ 0.61
Lrif1Q8CDD9 Hdhd5-201ENSMUST00000075303 1928 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Lrif1Q8CDD9 Arhgdia-202ENSMUST00000106197 1867 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Lrif1Q8CDD9 Krtap5-3-202ENSMUST00000187512 1652 ntAPPRIS P2 BASIC18.86■□□□□ 0.61
Lrif1Q8CDD9 Cnr1-201ENSMUST00000057188 5807 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Lrif1Q8CDD9 Smim19-201ENSMUST00000033935 1402 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Lrif1Q8CDD9 Rcor1-201ENSMUST00000084968 5684 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
Lrif1Q8CDD9 Ier3ip1-201ENSMUST00000026487 1395 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Lrif1Q8CDD9 Ssc4d-203ENSMUST00000111152 2745 ntAPPRIS P1 TSL 5 BASIC18.86■□□□□ 0.61
Lrif1Q8CDD9 Gm21956-201ENSMUST00000179946 522 ntBASIC18.86■□□□□ 0.61
Lrif1Q8CDD9 D630002J18Rik-201ENSMUST00000181854 1115 ntBASIC18.86■□□□□ 0.61
Lrif1Q8CDD9 Mir6236-201ENSMUST00000184437 123 ntBASIC18.86■□□□□ 0.61
Lrif1Q8CDD9 1110065P20Rik-206ENSMUST00000185036 1223 ntTSL 2 BASIC18.86■□□□□ 0.61
Lrif1Q8CDD9 Gm7143-201ENSMUST00000222811 859 ntBASIC18.86■□□□□ 0.61
Lrif1Q8CDD9 Alyref-201ENSMUST00000026125 3527 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Lrif1Q8CDD9 Grk2-202ENSMUST00000088737 3376 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Lrif1Q8CDD9 Dyrk1b-203ENSMUST00000172761 2018 ntAPPRIS ALT1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Lrif1Q8CDD9 Ssc4d-204ENSMUST00000111153 2745 ntAPPRIS P1 TSL 5 BASIC18.86■□□□□ 0.61
Lrif1Q8CDD9 Slc36a4-202ENSMUST00000115588 1745 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
Lrif1Q8CDD9 Dus3l-201ENSMUST00000007747 2303 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Lrif1Q8CDD9 Htra2-202ENSMUST00000113962 1305 ntTSL 5 BASIC18.85■□□□□ 0.61
Lrif1Q8CDD9 Dusp15-202ENSMUST00000109811 753 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Lrif1Q8CDD9 C1qtnf4-201ENSMUST00000111466 1290 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Lrif1Q8CDD9 Sumf1-206ENSMUST00000172188 723 ntTSL 5 BASIC18.85■□□□□ 0.61
Lrif1Q8CDD9 Rexo2-208ENSMUST00000216470 454 ntTSL 3 BASIC18.85■□□□□ 0.61
Lrif1Q8CDD9 AC140930.3-201ENSMUST00000222935 274 ntBASIC18.85■□□□□ 0.61
Lrif1Q8CDD9 Gm9870-201ENSMUST00000063874 645 ntBASIC18.85■□□□□ 0.61
Lrif1Q8CDD9 Azi2-207ENSMUST00000134433 2499 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Lrif1Q8CDD9 Zdhhc13-201ENSMUST00000118927 2410 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Lrif1Q8CDD9 Ccdc84-201ENSMUST00000053286 1725 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Lrif1Q8CDD9 Exog-202ENSMUST00000164213 2627 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Lrif1Q8CDD9 1700028E10Rik-201ENSMUST00000181114 2034 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Lrif1Q8CDD9 Spata2l-201ENSMUST00000098327 2380 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Lrif1Q8CDD9 Foxj1-201ENSMUST00000036215 2623 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Lrif1Q8CDD9 Atrn-201ENSMUST00000028781 8745 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Lrif1Q8CDD9 Med14-201ENSMUST00000076016 2561 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
Lrif1Q8CDD9 Gm14424-201ENSMUST00000143191 895 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Lrif1Q8CDD9 Pigx-211ENSMUST00000189013 982 ntAPPRIS ALT2 TSL 2 BASIC18.84■□□□□ 0.61
Lrif1Q8CDD9 Appbp2os-202ENSMUST00000206972 447 ntBASIC18.84■□□□□ 0.61
Lrif1Q8CDD9 Bag1-201ENSMUST00000030125 1295 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
Lrif1Q8CDD9 Oaz1-201ENSMUST00000060987 1071 ntAPPRIS ALT1 TSL 5 BASIC18.84■□□□□ 0.61
Lrif1Q8CDD9 Pigx-201ENSMUST00000096109 993 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
Lrif1Q8CDD9 Rem1-201ENSMUST00000000369 1663 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Lrif1Q8CDD9 Mrm1-201ENSMUST00000018549 2477 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Lrif1Q8CDD9 Creb1-204ENSMUST00000185594 1569 ntAPPRIS P1 TSL 5 BASIC18.84■□□□□ 0.61
Lrif1Q8CDD9 Pparg-202ENSMUST00000171644 2125 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Lrif1Q8CDD9 Fbxo30-201ENSMUST00000070300 2492 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Lrif1Q8CDD9 Rasl10b-202ENSMUST00000108140 3156 ntAPPRIS P1 TSL 2 BASIC18.83■□□□□ 0.61
Lrif1Q8CDD9 Pgam5-202ENSMUST00000112505 2098 ntAPPRIS ALT1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Lrif1Q8CDD9 Gse1-202ENSMUST00000118136 4492 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.61
Lrif1Q8CDD9 Nrxn2-201ENSMUST00000077182 6059 ntAPPRIS ALT2 TSL 5 BASIC18.83■□□□□ 0.61
Lrif1Q8CDD9 Gm10575-201ENSMUST00000097947 1671 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
Lrif1Q8CDD9 Ctbp2-201ENSMUST00000033269 2321 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Lrif1Q8CDD9 Cnih3-202ENSMUST00000161880 1995 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
Lrif1Q8CDD9 Cobll1-202ENSMUST00000102726 5031 ntAPPRIS P3 TSL 1 (best) BASIC18.83■□□□□ 0.6
Lrif1Q8CDD9 Cobll1-203ENSMUST00000112429 5045 ntAPPRIS ALT2 TSL 5 BASIC18.83■□□□□ 0.6
Lrif1Q8CDD9 Magi2-202ENSMUST00000101558 6530 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
Lrif1Q8CDD9 Adpgk-205ENSMUST00000217570 2484 ntAPPRIS P2 TSL 1 (best) BASIC18.83■□□□□ 0.6
Lrif1Q8CDD9 Itgb5-202ENSMUST00000115028 3090 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Lrif1Q8CDD9 Sox30-201ENSMUST00000049038 2997 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Lrif1Q8CDD9 B430218F22Rik-201ENSMUST00000181168 1495 ntAPPRIS P1 BASIC18.83■□□□□ 0.6
Lrif1Q8CDD9 Cnot11-201ENSMUST00000003219 3162 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Lrif1Q8CDD9 Dhx15-205ENSMUST00000199321 2550 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
Lrif1Q8CDD9 Prmt9-202ENSMUST00000118622 2768 ntAPPRIS ALT2 TSL 5 BASIC18.82■□□□□ 0.6
Lrif1Q8CDD9 Prmt9-201ENSMUST00000056237 2781 ntAPPRIS P2 TSL 1 (best) BASIC18.82■□□□□ 0.6
Lrif1Q8CDD9 Plin1-201ENSMUST00000032762 1916 ntAPPRIS P1 TSL 5 BASIC18.82■□□□□ 0.6
Lrif1Q8CDD9 Gm37352-201ENSMUST00000193908 2181 ntBASIC18.82■□□□□ 0.6
Retrieved 100 of 76,532 protein–RNA pairs in 88 ms