Protein–RNA interactions for Protein: Q80XC3

Usp6nl, USP6 N-terminal-like protein, mousemouse

Predictions only

Length 819 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp6nlQ80XC3 Mrpl10-202ENSMUST00000054252 744 ntTSL 5 BASIC21.21■□□□□ 0.99
Usp6nlQ80XC3 Zfp821-201ENSMUST00000034163 2127 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Usp6nlQ80XC3 Acsl3-203ENSMUST00000134566 2492 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
Usp6nlQ80XC3 Mprip-204ENSMUST00000116371 8766 ntAPPRIS ALT2 TSL 1 (best) BASIC21.2■□□□□ 0.98
Usp6nlQ80XC3 B930094E09Rik-201ENSMUST00000164667 1240 ntAPPRIS P1 BASIC21.2■□□□□ 0.98
Usp6nlQ80XC3 H2afx-201ENSMUST00000052686 1384 ntAPPRIS P1 BASIC21.2■□□□□ 0.98
Usp6nlQ80XC3 Ttc39c-201ENSMUST00000025294 2571 ntAPPRIS P2 TSL 1 (best) BASIC21.2■□□□□ 0.98
Usp6nlQ80XC3 Psme4-201ENSMUST00000041231 6491 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Usp6nlQ80XC3 Fbxo22-204ENSMUST00000146201 2009 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
Usp6nlQ80XC3 Brd1-203ENSMUST00000109381 4886 ntTSL 5 BASIC21.19■□□□□ 0.98
Usp6nlQ80XC3 Hnrnph3-202ENSMUST00000118898 2168 ntAPPRIS ALT1 TSL 5 BASIC21.19■□□□□ 0.98
Usp6nlQ80XC3 Prdm13-202ENSMUST00000095141 3173 ntAPPRIS P2 TSL 2 BASIC21.19■□□□□ 0.98
Usp6nlQ80XC3 Mpg-201ENSMUST00000020528 1737 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Usp6nlQ80XC3 Cklf-203ENSMUST00000211809 525 ntAPPRIS ALT2 TSL 1 (best) BASIC21.19■□□□□ 0.98
Usp6nlQ80XC3 Olfr322-201ENSMUST00000072030 984 ntAPPRIS P1 BASIC21.19■□□□□ 0.98
Usp6nlQ80XC3 Frat1-201ENSMUST00000087155 2614 ntAPPRIS P1 BASIC21.19■□□□□ 0.98
Usp6nlQ80XC3 Rasgrf2-206ENSMUST00000216219 2115 ntTSL 5 BASIC21.19■□□□□ 0.98
Usp6nlQ80XC3 March11-202ENSMUST00000140840 1558 ntAPPRIS P3 TSL 2 BASIC21.19■□□□□ 0.98
Usp6nlQ80XC3 Polr2m-201ENSMUST00000034720 2200 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Usp6nlQ80XC3 Capzb-203ENSMUST00000102507 1702 ntAPPRIS P4 TSL 1 (best) BASIC21.18■□□□□ 0.98
Usp6nlQ80XC3 Ttc39a-203ENSMUST00000106619 1778 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
Usp6nlQ80XC3 Vim-206ENSMUST00000193675 1777 ntAPPRIS ALT2 TSL 5 BASIC21.18■□□□□ 0.98
Usp6nlQ80XC3 Runx1-203ENSMUST00000168195 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC21.18■□□□□ 0.98
Usp6nlQ80XC3 Srsf12-201ENSMUST00000067864 2939 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Usp6nlQ80XC3 Tfg-202ENSMUST00000121554 716 ntAPPRIS ALT2 TSL 5 BASIC21.18■□□□□ 0.98
Usp6nlQ80XC3 Pabpn1-205ENSMUST00000141446 912 ntAPPRIS ALT2 TSL 3 BASIC21.18■□□□□ 0.98
Usp6nlQ80XC3 Tmem239-201ENSMUST00000055421 1291 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Usp6nlQ80XC3 A230083G16Rik-201ENSMUST00000069553 991 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
Usp6nlQ80XC3 Cbln2-201ENSMUST00000068423 2475 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Usp6nlQ80XC3 Ccnjl-201ENSMUST00000050574 2672 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Usp6nlQ80XC3 Neurl4-202ENSMUST00000108617 4892 ntAPPRIS ALT2 TSL 5 BASIC21.17■□□□□ 0.98
Usp6nlQ80XC3 Zranb1-202ENSMUST00000106157 5008 ntAPPRIS P2 TSL 5 BASIC21.17■□□□□ 0.98
Usp6nlQ80XC3 1110004F10Rik-202ENSMUST00000106607 1153 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
Usp6nlQ80XC3 Gm15556-201ENSMUST00000122904 663 ntTSL 5 BASIC21.17■□□□□ 0.98
Usp6nlQ80XC3 Rps23-201ENSMUST00000051955 937 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Usp6nlQ80XC3 Rtl8a-201ENSMUST00000088779 1195 ntAPPRIS P1 BASIC21.17■□□□□ 0.98
Usp6nlQ80XC3 Alg1-201ENSMUST00000049207 1669 ntAPPRIS ALT2 TSL 2 BASIC21.17■□□□□ 0.98
Usp6nlQ80XC3 Sfrp5-201ENSMUST00000018966 1900 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Usp6nlQ80XC3 Tfap2e-201ENSMUST00000048194 2085 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Usp6nlQ80XC3 Rnf26-206ENSMUST00000216511 2257 ntAPPRIS ALT2 TSL 5 BASIC21.17■□□□□ 0.98
Usp6nlQ80XC3 Dapk1-202ENSMUST00000077453 5491 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Usp6nlQ80XC3 Arnt2-201ENSMUST00000085077 6151 ntAPPRIS P2 TSL 1 (best) BASIC21.17■□□□□ 0.98
Usp6nlQ80XC3 Srsf10-203ENSMUST00000102544 2225 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
Usp6nlQ80XC3 Cacnb1-203ENSMUST00000103144 2236 ntTSL 5 BASIC21.16■□□□□ 0.98
Usp6nlQ80XC3 Schip1-206ENSMUST00000182719 2156 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
Usp6nlQ80XC3 Aifm2-204ENSMUST00000105455 1512 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Usp6nlQ80XC3 Snapc2-201ENSMUST00000011981 1536 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Usp6nlQ80XC3 Gm11627-202ENSMUST00000107081 818 ntAPPRIS P1 TSL 2 BASIC21.16■□□□□ 0.98
Usp6nlQ80XC3 Ttc14-211ENSMUST00000200271 2724 ntAPPRIS ALT2 TSL 1 (best) BASIC21.16■□□□□ 0.98
Usp6nlQ80XC3 Slc35f5-201ENSMUST00000027580 2733 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Usp6nlQ80XC3 Ankrd33b-203ENSMUST00000110410 2070 ntAPPRIS P3 TSL 1 (best) BASIC21.16■□□□□ 0.98
Usp6nlQ80XC3 Kcnk15-202ENSMUST00000109396 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC21.16■□□□□ 0.98
Usp6nlQ80XC3 Cnot6-203ENSMUST00000145353 5736 ntAPPRIS P1 TSL 5 BASIC21.16■□□□□ 0.98
Usp6nlQ80XC3 Thra-201ENSMUST00000064187 2452 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
Usp6nlQ80XC3 Wdr20-205ENSMUST00000193053 1351 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
Usp6nlQ80XC3 Magi2-201ENSMUST00000088516 4843 ntAPPRIS P2 TSL 5 BASIC21.15■□□□□ 0.98
Usp6nlQ80XC3 a-202ENSMUST00000109697 705 ntAPPRIS P1 TSL 5 BASIC21.15■□□□□ 0.98
Usp6nlQ80XC3 Sox15-201ENSMUST00000047373 861 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Usp6nlQ80XC3 Rnf208-201ENSMUST00000060818 1137 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Usp6nlQ80XC3 Rpl21-203ENSMUST00000099272 1067 ntAPPRIS P1 TSL 3 BASIC21.15■□□□□ 0.98
Usp6nlQ80XC3 Gm10812-201ENSMUST00000099864 546 ntBASIC21.15■□□□□ 0.98
Usp6nlQ80XC3 3110053B16Rik-202ENSMUST00000140360 2004 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
Usp6nlQ80XC3 Gm6802-201ENSMUST00000167843 1983 ntBASIC21.15■□□□□ 0.98
Usp6nlQ80XC3 Arid3c-204ENSMUST00000171251 1751 ntAPPRIS P3 TSL 5 BASIC21.15■□□□□ 0.98
Usp6nlQ80XC3 Rprm-201ENSMUST00000100089 1460 ntAPPRIS P1 BASIC21.14■□□□□ 0.98
Usp6nlQ80XC3 Alcam-206ENSMUST00000168071 878 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
Usp6nlQ80XC3 Psenen-201ENSMUST00000043898 708 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Usp6nlQ80XC3 Rps16-201ENSMUST00000082134 1109 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Usp6nlQ80XC3 Psen2-202ENSMUST00000111104 1475 ntAPPRIS ALT1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Usp6nlQ80XC3 Slc12a2-201ENSMUST00000115366 6520 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Usp6nlQ80XC3 Zmym3-207ENSMUST00000120201 1859 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
Usp6nlQ80XC3 Cyp2r1-207ENSMUST00000211506 1887 ntTSL 5 BASIC21.13■□□□□ 0.97
Usp6nlQ80XC3 Catsper2-201ENSMUST00000038073 2247 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Usp6nlQ80XC3 Coq9-201ENSMUST00000034234 1789 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Usp6nlQ80XC3 Atf5-202ENSMUST00000107893 1735 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Usp6nlQ80XC3 Mettl25-201ENSMUST00000046638 2033 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Usp6nlQ80XC3 Nat9-201ENSMUST00000103038 1143 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Usp6nlQ80XC3 Inpp5a-201ENSMUST00000026550 2774 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
Usp6nlQ80XC3 Map3k15-201ENSMUST00000033665 4348 ntAPPRIS P1 TSL 5 BASIC21.13■□□□□ 0.97
Usp6nlQ80XC3 Lmtk3-202ENSMUST00000120005 4997 ntAPPRIS P2 TSL 1 (best) BASIC21.12■□□□□ 0.97
Usp6nlQ80XC3 Chtop-207ENSMUST00000107346 1321 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
Usp6nlQ80XC3 Gm13509-201ENSMUST00000119733 1308 ntBASIC21.12■□□□□ 0.97
Usp6nlQ80XC3 Ccdc149-202ENSMUST00000198008 2470 ntTSL 5 BASIC21.12■□□□□ 0.97
Usp6nlQ80XC3 1110046J04Rik-201ENSMUST00000147622 397 ntTSL 3 BASIC21.12■□□□□ 0.97
Usp6nlQ80XC3 Zfp580-201ENSMUST00000069324 1096 ntAPPRIS P2 TSL 1 (best) BASIC21.12■□□□□ 0.97
Usp6nlQ80XC3 Hist2h2aa2-201ENSMUST00000074976 528 ntAPPRIS P1 BASIC21.12■□□□□ 0.97
Usp6nlQ80XC3 Hist2h2aa1-201ENSMUST00000078756 586 ntAPPRIS P1 BASIC21.12■□□□□ 0.97
Usp6nlQ80XC3 Kcnn4-201ENSMUST00000171904 1990 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Usp6nlQ80XC3 Nkx2-1-202ENSMUST00000178477 2242 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Usp6nlQ80XC3 Dbf4-207ENSMUST00000171808 2402 ntAPPRIS P3 TSL 1 (best) BASIC21.12■□□□□ 0.97
Usp6nlQ80XC3 Ctdsp1-201ENSMUST00000027367 2876 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Usp6nlQ80XC3 Gm28523-201ENSMUST00000190040 1588 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
Usp6nlQ80XC3 Cox18-201ENSMUST00000048363 1333 ntAPPRIS P3 TSL 1 (best) BASIC21.11■□□□□ 0.97
Usp6nlQ80XC3 Rhno1-202ENSMUST00000112151 1108 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Usp6nlQ80XC3 4930412O13Rik-201ENSMUST00000026889 1187 ntAPPRIS P5 TSL 1 (best) BASIC21.11■□□□□ 0.97
Usp6nlQ80XC3 Notumos-201ENSMUST00000151998 2659 ntBASIC21.11■□□□□ 0.97
Usp6nlQ80XC3 B430319F04Rik-201ENSMUST00000209731 2669 ntBASIC21.11■□□□□ 0.97
Usp6nlQ80XC3 Gtpbp2-217ENSMUST00000172170 2587 ntTSL 5 BASIC21.1■□□□□ 0.97
Usp6nlQ80XC3 Cdo1-201ENSMUST00000035804 1530 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Usp6nlQ80XC3 Arrb2-202ENSMUST00000084954 1732 ntTSL 5 BASIC21.1■□□□□ 0.97
Retrieved 100 of 76,532 protein–RNA pairs in 25.9 ms