Protein–RNA interactions for Protein: Q80TE0

Rpap1, RNA polymerase II-associated protein 1, mousemouse

Predictions only

Length 1,409 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpap1Q80TE0 Tex30-212ENSMUST00000152239 1046 ntAPPRIS P1 TSL 1 (best) BASIC30.01■■■□□ 2.39
Rpap1Q80TE0 AL672049.1-201ENSMUST00000197943 91 ntBASIC30.01■■■□□ 2.39
Rpap1Q80TE0 Snhg20-203ENSMUST00000182811 2153 ntBASIC30■■■□□ 2.39
Rpap1Q80TE0 Rpl27-202ENSMUST00000107249 732 ntAPPRIS P1 TSL 2 BASIC30■■■□□ 2.39
Rpap1Q80TE0 Rpl36al-202ENSMUST00000110619 1276 ntAPPRIS P1 BASIC30■■■□□ 2.39
Rpap1Q80TE0 Smim10l1-204ENSMUST00000191462 574 ntTSL 3 BASIC30■■■□□ 2.39
Rpap1Q80TE0 AC142113.1-201ENSMUST00000214931 801 ntTSL 5 BASIC30■■■□□ 2.39
Rpap1Q80TE0 Clybl-201ENSMUST00000026625 1231 ntAPPRIS P1 TSL 1 (best) BASIC30■■■□□ 2.39
Rpap1Q80TE0 Catsper2-201ENSMUST00000038073 2247 ntAPPRIS P1 TSL 1 (best) BASIC29.99■■■□□ 2.39
Rpap1Q80TE0 Gm6277-202ENSMUST00000224036 2779 ntBASIC29.99■■■□□ 2.39
Rpap1Q80TE0 Stx4a-201ENSMUST00000033075 1456 ntAPPRIS P1 TSL 1 (best) BASIC29.99■■■□□ 2.39
Rpap1Q80TE0 Slc16a11-205ENSMUST00000126388 1938 ntAPPRIS P1 TSL 5 BASIC29.99■■■□□ 2.39
Rpap1Q80TE0 Gm45822-201ENSMUST00000212231 259 ntTSL 3 BASIC29.99■■■□□ 2.39
Rpap1Q80TE0 Ankrd33b-203ENSMUST00000110410 2070 ntAPPRIS P3 TSL 1 (best) BASIC29.99■■■□□ 2.39
Rpap1Q80TE0 Usp12-201ENSMUST00000085614 4327 ntAPPRIS P1 TSL 1 (best) BASIC29.99■■■□□ 2.39
Rpap1Q80TE0 Spry1-201ENSMUST00000038569 2481 ntAPPRIS P1 TSL 1 (best) BASIC29.99■■■□□ 2.39
Rpap1Q80TE0 Ypel1-201ENSMUST00000035682 3322 ntAPPRIS P1 TSL 1 (best) BASIC29.99■■■□□ 2.39
Rpap1Q80TE0 Edn2-201ENSMUST00000030384 1462 ntAPPRIS P1 TSL 1 (best) BASIC29.99■■■□□ 2.39
Rpap1Q80TE0 Ap1ar-201ENSMUST00000051737 2662 ntAPPRIS P1 TSL 3 BASIC29.98■■■□□ 2.39
Rpap1Q80TE0 Dcxr-202ENSMUST00000106148 830 ntTSL 2 BASIC29.98■■■□□ 2.39
Rpap1Q80TE0 Gm10698-201ENSMUST00000182663 604 ntBASIC29.98■■■□□ 2.39
Rpap1Q80TE0 Dleu2-210ENSMUST00000183054 722 ntTSL 5 BASIC29.98■■■□□ 2.39
Rpap1Q80TE0 Gm44899-201ENSMUST00000207451 391 ntTSL 3 BASIC29.98■■■□□ 2.39
Rpap1Q80TE0 Rasgrf2-206ENSMUST00000216219 2115 ntTSL 5 BASIC29.98■■■□□ 2.39
Rpap1Q80TE0 Naxe-201ENSMUST00000029708 908 ntAPPRIS P1 TSL 1 (best) BASIC29.98■■■□□ 2.39
Rpap1Q80TE0 Fgf2os-201ENSMUST00000153785 1441 ntTSL 1 (best) BASIC29.98■■■□□ 2.39
Rpap1Q80TE0 Tradd-201ENSMUST00000034359 1689 ntAPPRIS P1 TSL 1 (best) BASIC29.98■■■□□ 2.39
Rpap1Q80TE0 Hoxc6-201ENSMUST00000001711 1581 ntAPPRIS P1 TSL 1 (best) BASIC29.98■■■□□ 2.39
Rpap1Q80TE0 BC037034-201ENSMUST00000048421 2490 ntAPPRIS P1 TSL 1 (best) BASIC29.98■■■□□ 2.39
Rpap1Q80TE0 Vti1b-201ENSMUST00000055262 1490 ntAPPRIS P1 TSL 1 (best) BASIC29.98■■■□□ 2.39
Rpap1Q80TE0 Dnajb3-201ENSMUST00000119972 1051 ntAPPRIS P1 BASIC29.97■■■□□ 2.39
Rpap1Q80TE0 Dohh-206ENSMUST00000131968 672 ntAPPRIS P1 TSL 3 BASIC29.97■■■□□ 2.39
Rpap1Q80TE0 Gm20390-201ENSMUST00000170303 991 ntAPPRIS P1 TSL 5 BASIC29.97■■■□□ 2.39
Rpap1Q80TE0 Polr2m-201ENSMUST00000034720 2200 ntAPPRIS P1 TSL 1 (best) BASIC29.97■■■□□ 2.39
Rpap1Q80TE0 Csrp2-201ENSMUST00000020403 1384 ntAPPRIS P1 TSL 1 (best) BASIC29.97■■■□□ 2.39
Rpap1Q80TE0 Smpdl3a-201ENSMUST00000020022 1961 ntAPPRIS P1 TSL 1 (best) BASIC29.97■■■□□ 2.39
Rpap1Q80TE0 Atpaf1-203ENSMUST00000176047 2330 ntAPPRIS P1 TSL 1 (best) BASIC29.96■■■□□ 2.39
Rpap1Q80TE0 Dxo-211ENSMUST00000180043 1447 ntAPPRIS P1 TSL 5 BASIC29.96■■■□□ 2.39
Rpap1Q80TE0 Rcor3-203ENSMUST00000192128 1578 ntAPPRIS P3 TSL 1 (best) BASIC29.96■■■□□ 2.39
Rpap1Q80TE0 Ccnd2-202ENSMUST00000201066 983 ntTSL 2 BASIC29.96■■■□□ 2.39
Rpap1Q80TE0 Etv4-212ENSMUST00000164750 2336 ntAPPRIS P3 TSL 1 (best) BASIC29.96■■■□□ 2.39
Rpap1Q80TE0 1700065D16Rik-204ENSMUST00000189348 1540 ntTSL 2 BASIC29.96■■■□□ 2.39
Rpap1Q80TE0 Tcf7-202ENSMUST00000109071 1742 ntAPPRIS P1 TSL 1 (best) BASIC29.96■■■□□ 2.39
Rpap1Q80TE0 Aebp2-203ENSMUST00000095350 2575 ntAPPRIS ALT2 TSL 1 (best) BASIC29.96■■■□□ 2.39
Rpap1Q80TE0 Ccdc107-202ENSMUST00000107922 865 ntAPPRIS ALT2 TSL 2 BASIC29.96■■■□□ 2.39
Rpap1Q80TE0 Phf12-202ENSMUST00000108360 3047 ntTSL 1 (best) BASIC29.95■■■□□ 2.39
Rpap1Q80TE0 Gm11249-201ENSMUST00000117071 859 ntBASIC29.95■■■□□ 2.38
Rpap1Q80TE0 Fxn-201ENSMUST00000081333 1114 ntAPPRIS P1 TSL 1 (best) BASIC29.95■■■□□ 2.38
Rpap1Q80TE0 Syt17-203ENSMUST00000203485 1932 ntTSL 1 (best) BASIC29.95■■■□□ 2.38
Rpap1Q80TE0 Lsr-203ENSMUST00000108116 2071 ntAPPRIS ALT2 TSL 1 (best) BASIC29.94■■■□□ 2.38
Rpap1Q80TE0 Kremen2-201ENSMUST00000046525 2123 ntAPPRIS P1 TSL 1 (best) BASIC29.94■■■□□ 2.38
Rpap1Q80TE0 Qpct-201ENSMUST00000040789 1924 ntAPPRIS P1 TSL 1 (best) BASIC29.94■■■□□ 2.38
Rpap1Q80TE0 Zfp64-202ENSMUST00000109161 1009 ntTSL 1 (best) BASIC29.94■■■□□ 2.38
Rpap1Q80TE0 Sap18-201ENSMUST00000111267 660 ntTSL 2 BASIC29.94■■■□□ 2.38
Rpap1Q80TE0 Sec22c-202ENSMUST00000111560 2669 ntAPPRIS P1 TSL 1 (best) BASIC29.94■■■□□ 2.38
Rpap1Q80TE0 Cbln2-201ENSMUST00000068423 2475 ntAPPRIS P1 TSL 1 (best) BASIC29.94■■■□□ 2.38
Rpap1Q80TE0 Polr1c-201ENSMUST00000087026 1314 ntAPPRIS P1 TSL 1 (best) BASIC29.94■■■□□ 2.38
Rpap1Q80TE0 Cotl1-201ENSMUST00000034285 1596 ntAPPRIS P1 TSL 1 (best) BASIC29.94■■■□□ 2.38
Rpap1Q80TE0 Dnajb11-201ENSMUST00000004574 1927 ntAPPRIS P1 TSL 1 (best) BASIC29.93■■■□□ 2.38
Rpap1Q80TE0 Selenos-201ENSMUST00000101801 1191 ntAPPRIS P2 TSL 1 (best) BASIC29.93■■■□□ 2.38
Rpap1Q80TE0 Gm26971-201ENSMUST00000182423 1072 ntBASIC29.93■■■□□ 2.38
Rpap1Q80TE0 Ksr1-202ENSMUST00000108264 2748 ntTSL 5 BASIC29.92■■■□□ 2.38
Rpap1Q80TE0 Intu-201ENSMUST00000061590 1589 ntAPPRIS ALT2 TSL 2 BASIC29.92■■■□□ 2.38
Rpap1Q80TE0 Zfp444-203ENSMUST00000108566 1648 ntAPPRIS P1 TSL 1 (best) BASIC29.92■■■□□ 2.38
Rpap1Q80TE0 Gm15565-201ENSMUST00000118890 427 ntBASIC29.92■■■□□ 2.38
Rpap1Q80TE0 Insig2-203ENSMUST00000159085 1252 ntAPPRIS P1 TSL 1 (best) BASIC29.92■■■□□ 2.38
Rpap1Q80TE0 AC153881.1-201ENSMUST00000214448 284 ntBASIC29.92■■■□□ 2.38
Rpap1Q80TE0 Snapc3-202ENSMUST00000071544 942 ntTSL 1 (best) BASIC29.92■■■□□ 2.38
Rpap1Q80TE0 Kcnn4-201ENSMUST00000171904 1990 ntAPPRIS P1 TSL 1 (best) BASIC29.91■■■□□ 2.38
Rpap1Q80TE0 Hsf1-201ENSMUST00000072838 2018 ntTSL 1 (best) BASIC29.91■■■□□ 2.38
Rpap1Q80TE0 Olig1-201ENSMUST00000056882 2162 ntAPPRIS P1 BASIC29.91■■■□□ 2.38
Rpap1Q80TE0 Dennd6a-202ENSMUST00000203874 2677 ntTSL 1 (best) BASIC29.91■■■□□ 2.38
Rpap1Q80TE0 Pbx1-202ENSMUST00000072863 1709 ntTSL 1 (best) BASIC29.91■■■□□ 2.38
Rpap1Q80TE0 Mboat4-201ENSMUST00000095345 1836 ntAPPRIS P1 TSL 1 (best) BASIC29.91■■■□□ 2.38
Rpap1Q80TE0 4930518J20Rik-201ENSMUST00000195064 1478 ntBASIC29.91■■■□□ 2.38
Rpap1Q80TE0 Klk9-201ENSMUST00000005891 1476 ntAPPRIS P1 TSL 1 (best) BASIC29.91■■■□□ 2.38
Rpap1Q80TE0 Lhx2-203ENSMUST00000143783 1696 ntTSL 1 (best) BASIC29.91■■■□□ 2.38
Rpap1Q80TE0 9430060I03Rik-201ENSMUST00000191563 1689 ntTSL 1 (best) BASIC29.91■■■□□ 2.38
Rpap1Q80TE0 Gm21596-201ENSMUST00000178049 1316 ntBASIC29.9■■■□□ 2.38
Rpap1Q80TE0 Acsl3-203ENSMUST00000134566 2492 ntTSL 1 (best) BASIC29.9■■■□□ 2.38
Rpap1Q80TE0 Tcerg1l-201ENSMUST00000160436 2565 ntAPPRIS P1 TSL 5 BASIC29.9■■■□□ 2.38
Rpap1Q80TE0 Pgap3-205ENSMUST00000128897 1264 ntTSL 5 BASIC29.89■■■□□ 2.38
Rpap1Q80TE0 Pdlim5-202ENSMUST00000058626 873 ntTSL 5 BASIC29.89■■■□□ 2.38
Rpap1Q80TE0 Tmem80-206ENSMUST00000133012 1524 ntAPPRIS P1 TSL 1 (best) BASIC29.89■■■□□ 2.38
Rpap1Q80TE0 Vgll2-202ENSMUST00000163017 1650 ntAPPRIS P3 TSL 1 (best) BASIC29.89■■■□□ 2.38
Rpap1Q80TE0 Gm32699-201ENSMUST00000221728 1988 ntBASIC29.89■■■□□ 2.38
Rpap1Q80TE0 Socs2-201ENSMUST00000020215 2222 ntAPPRIS P1 TSL 1 (best) BASIC29.89■■■□□ 2.38
Rpap1Q80TE0 Foxa2-201ENSMUST00000047315 2128 ntAPPRIS P3 TSL 1 (best) BASIC29.89■■■□□ 2.37
Rpap1Q80TE0 9130019P16Rik-203ENSMUST00000185712 650 ntTSL 5 BASIC29.88■■■□□ 2.37
Rpap1Q80TE0 Gm9484-201ENSMUST00000195892 1159 ntBASIC29.88■■■□□ 2.37
Rpap1Q80TE0 4932443I19Rik-204ENSMUST00000214337 1212 ntAPPRIS ALT2 TSL 5 BASIC29.88■■■□□ 2.37
Rpap1Q80TE0 H2-Eb1-201ENSMUST00000074557 1184 ntAPPRIS P1 TSL 1 (best) BASIC29.88■■■□□ 2.37
Rpap1Q80TE0 Gm9817-201ENSMUST00000054395 2531 ntAPPRIS P1 BASIC29.88■■■□□ 2.37
Rpap1Q80TE0 D11Wsu47e-201ENSMUST00000042227 2196 ntAPPRIS P1 TSL 1 (best) BASIC29.88■■■□□ 2.37
Rpap1Q80TE0 Ccdc124-201ENSMUST00000007865 1356 ntAPPRIS P1 TSL 1 (best) BASIC29.88■■■□□ 2.37
Rpap1Q80TE0 Gm16998-201ENSMUST00000181899 1230 ntTSL 1 (best) BASIC29.88■■■□□ 2.37
Rpap1Q80TE0 Creb1-207ENSMUST00000187811 1255 ntTSL 1 (best) BASIC29.88■■■□□ 2.37
Rpap1Q80TE0 AC154649.1-201ENSMUST00000227392 384 ntBASIC29.87■■■□□ 2.37
Rpap1Q80TE0 Crybb1-201ENSMUST00000031286 882 ntAPPRIS P1 TSL 1 (best) BASIC29.87■■■□□ 2.37
Rpap1Q80TE0 Gdf1-201ENSMUST00000207684 1349 ntAPPRIS P1 TSL 1 (best) BASIC29.86■■■□□ 2.37
Retrieved 100 of 76,532 protein–RNA pairs in 124.7 ms