Protein–RNA interactions for Protein: Q61116

Znf235, Zinc finger protein 235, mousemouse

Predictions only

Length 645 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Znf235Q61116 A930018P22Rik-201ENSMUST00000040374 822 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Znf235Q61116 Ankrd37-201ENSMUST00000053558 927 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Znf235Q61116 AB124611-202ENSMUST00000086361 1310 ntAPPRIS ALT2 TSL 1 (best) BASIC20.17■□□□□ 0.82
Znf235Q61116 Mrps16-201ENSMUST00000061444 2572 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Znf235Q61116 Ubtf-210ENSMUST00000174302 4692 ntAPPRIS P3 TSL 5 BASIC20.16■□□□□ 0.82
Znf235Q61116 Coro1a-209ENSMUST00000173108 1170 ntTSL 5 BASIC20.16■□□□□ 0.82
Znf235Q61116 Psmd3-201ENSMUST00000017365 2148 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Znf235Q61116 Fxyd1-215ENSMUST00000206474 572 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Znf235Q61116 Rab34-209ENSMUST00000207728 567 ntTSL 2 BASIC20.16■□□□□ 0.82
Znf235Q61116 Slc7a6os-201ENSMUST00000035925 1246 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Znf235Q61116 Phc2-202ENSMUST00000106079 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC20.16■□□□□ 0.82
Znf235Q61116 Desi2-204ENSMUST00000161075 2590 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
Znf235Q61116 Khdc3-201ENSMUST00000034737 1681 ntAPPRIS P3 TSL 1 (best) BASIC20.16■□□□□ 0.82
Znf235Q61116 Sstr1-201ENSMUST00000044299 2014 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Znf235Q61116 Trmt61a-202ENSMUST00000168338 2131 ntAPPRIS P1 TSL 5 BASIC20.15■□□□□ 0.82
Znf235Q61116 Mreg-201ENSMUST00000048860 2284 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Znf235Q61116 E4f1-201ENSMUST00000056032 2574 ntAPPRIS P2 TSL 1 (best) BASIC20.15■□□□□ 0.82
Znf235Q61116 Gm12669-201ENSMUST00000122162 1009 ntBASIC20.15■□□□□ 0.82
Znf235Q61116 Gm44210-201ENSMUST00000205253 713 ntTSL 3 BASIC20.15■□□□□ 0.82
Znf235Q61116 BC107364-201ENSMUST00000093126 1159 ntAPPRIS P4 TSL 1 (best) BASIC20.15■□□□□ 0.82
Znf235Q61116 BC107364-202ENSMUST00000098841 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC20.15■□□□□ 0.82
Znf235Q61116 1700065D16Rik-204ENSMUST00000189348 1540 ntTSL 2 BASIC20.15■□□□□ 0.82
Znf235Q61116 Cln5-201ENSMUST00000022721 2445 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Znf235Q61116 Slc35f5-201ENSMUST00000027580 2733 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.82
Znf235Q61116 Tcp11-201ENSMUST00000042692 1984 ntAPPRIS P3 TSL 1 (best) BASIC20.14■□□□□ 0.81
Znf235Q61116 Cdo1-201ENSMUST00000035804 1530 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Znf235Q61116 Psen2-202ENSMUST00000111104 1475 ntAPPRIS ALT1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Znf235Q61116 Stx4a-201ENSMUST00000033075 1456 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Znf235Q61116 Gm43859-201ENSMUST00000200075 1412 ntBASIC20.14■□□□□ 0.81
Znf235Q61116 Ube2b-202ENSMUST00000109086 585 ntAPPRIS P1 TSL 2 BASIC20.14■□□□□ 0.81
Znf235Q61116 Rbm39-202ENSMUST00000109584 667 ntTSL 5 BASIC20.14■□□□□ 0.81
Znf235Q61116 Tomm6-201ENSMUST00000113301 594 ntAPPRIS P1 TSL 2 BASIC20.14■□□□□ 0.81
Znf235Q61116 Gm6211-202ENSMUST00000167849 925 ntBASIC20.14■□□□□ 0.81
Znf235Q61116 Rps2-ps11-201ENSMUST00000195283 868 ntBASIC20.14■□□□□ 0.81
Znf235Q61116 Foxk1-202ENSMUST00000198422 687 ntTSL 3 BASIC20.14■□□□□ 0.81
Znf235Q61116 Smad4-201ENSMUST00000025393 3384 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Znf235Q61116 Nhlh1-201ENSMUST00000059794 2464 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Znf235Q61116 Gal3st3-201ENSMUST00000061169 2421 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Znf235Q61116 Donson-203ENSMUST00000117159 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC20.14■□□□□ 0.81
Znf235Q61116 Gm3164-201ENSMUST00000168866 1945 ntAPPRIS P1 TSL 5 BASIC20.14■□□□□ 0.81
Znf235Q61116 Lgmn-202ENSMUST00000110020 1835 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Znf235Q61116 Pacsin2-201ENSMUST00000056177 2795 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Znf235Q61116 Khk-204ENSMUST00000201621 1583 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Znf235Q61116 Irx2-201ENSMUST00000074372 2625 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Znf235Q61116 Kifc3-201ENSMUST00000034240 3277 ntAPPRIS P4 TSL 1 (best) BASIC20.13■□□□□ 0.81
Znf235Q61116 Ildr2-204ENSMUST00000192732 2263 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
Znf235Q61116 Mgll-205ENSMUST00000150180 1312 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
Znf235Q61116 Aunip-201ENSMUST00000105866 1275 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Znf235Q61116 Gm44238-201ENSMUST00000203300 353 ntTSL 3 BASIC20.13■□□□□ 0.81
Znf235Q61116 Gng5-201ENSMUST00000090031 593 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Znf235Q61116 Cbfb-204ENSMUST00000109395 2709 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
Znf235Q61116 1810055G02Rik-201ENSMUST00000039048 1882 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Znf235Q61116 Brsk2-205ENSMUST00000172652 2501 ntTSL 5 BASIC20.13■□□□□ 0.81
Znf235Q61116 AC165249.1-201ENSMUST00000220031 1599 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
Znf235Q61116 D5Ertd579e-204ENSMUST00000140653 2014 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
Znf235Q61116 Gm30003-201ENSMUST00000200700 1433 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
Znf235Q61116 Etv2-201ENSMUST00000108147 1048 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Znf235Q61116 Mgll-203ENSMUST00000113582 1034 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
Znf235Q61116 Gm12441-201ENSMUST00000121806 588 ntBASIC20.12■□□□□ 0.81
Znf235Q61116 Tspan2os-201ENSMUST00000146624 590 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
Znf235Q61116 Spcs1-201ENSMUST00000186131 1005 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
Znf235Q61116 Jsrp1-201ENSMUST00000020435 955 ntAPPRIS ALT2 TSL 2 BASIC20.12■□□□□ 0.81
Znf235Q61116 Spcs1-207ENSMUST00000228767 1008 ntBASIC20.12■□□□□ 0.81
Znf235Q61116 Nt5c3b-204ENSMUST00000107398 1635 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
Znf235Q61116 Hoxc6-201ENSMUST00000001711 1581 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Znf235Q61116 Sdsl-201ENSMUST00000031594 1476 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Znf235Q61116 Cd24a-201ENSMUST00000058714 1816 ntAPPRIS P2 TSL 1 (best) BASIC20.11■□□□□ 0.81
Znf235Q61116 Srsf10-203ENSMUST00000102544 2225 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
Znf235Q61116 Gsto2-201ENSMUST00000056159 1351 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Znf235Q61116 Lhx2-203ENSMUST00000143783 1696 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
Znf235Q61116 Rpl26-202ENSMUST00000101014 657 ntAPPRIS ALT1 TSL 5 BASIC20.11■□□□□ 0.81
Znf235Q61116 Gm40460-201ENSMUST00000211591 735 ntAPPRIS P1 BASIC20.11■□□□□ 0.81
Znf235Q61116 Mcrip2-201ENSMUST00000026828 816 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Znf235Q61116 Park7-201ENSMUST00000030805 908 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Znf235Q61116 Klhdc3-202ENSMUST00000165007 1973 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Znf235Q61116 Hexa-201ENSMUST00000026262 1996 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Znf235Q61116 Ahsa2-201ENSMUST00000020529 3023 ntAPPRIS P3 TSL 1 (best) BASIC20.11■□□□□ 0.81
Znf235Q61116 Polr2c-201ENSMUST00000109521 1580 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Znf235Q61116 Slc35d3-201ENSMUST00000059805 2630 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Znf235Q61116 Gpc3-202ENSMUST00000114857 1880 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
Znf235Q61116 Eif2b4-203ENSMUST00000166769 1878 ntTSL 5 BASIC20.11■□□□□ 0.81
Znf235Q61116 Inpp5a-203ENSMUST00000106098 2826 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Znf235Q61116 Vim-206ENSMUST00000193675 1777 ntAPPRIS ALT2 TSL 5 BASIC20.11■□□□□ 0.81
Znf235Q61116 Dmrt1-201ENSMUST00000025755 2340 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Znf235Q61116 Ntmt1-201ENSMUST00000041830 1387 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Znf235Q61116 Serbp1-211ENSMUST00000204293 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC20.1■□□□□ 0.81
Znf235Q61116 Grrp1-201ENSMUST00000060050 1226 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Znf235Q61116 Gm3667-201ENSMUST00000171906 2053 ntAPPRIS P1 TSL 5 BASIC20.1■□□□□ 0.81
Znf235Q61116 Dpf1-201ENSMUST00000049977 2309 ntAPPRIS P2 TSL 1 (best) BASIC20.1■□□□□ 0.81
Znf235Q61116 Kndc1-202ENSMUST00000121839 2210 ntTSL 2 BASIC20.1■□□□□ 0.81
Znf235Q61116 Smad6-201ENSMUST00000041029 2971 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Znf235Q61116 Gabra5-201ENSMUST00000068456 2671 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Znf235Q61116 Nol9-202ENSMUST00000103197 2271 ntAPPRIS P3 TSL 1 (best) BASIC20.09■□□□□ 0.81
Znf235Q61116 Rab3il1-201ENSMUST00000113161 2225 ntAPPRIS P3 TSL 5 BASIC20.09■□□□□ 0.81
Znf235Q61116 Dsg2-203ENSMUST00000121837 953 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
Znf235Q61116 Smim27-201ENSMUST00000129758 1044 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Znf235Q61116 Prmt1-205ENSMUST00000207659 945 ntTSL 5 BASIC20.09■□□□□ 0.81
Znf235Q61116 Gm10153-202ENSMUST00000210290 963 ntAPPRIS P1 BASIC20.09■□□□□ 0.81
Znf235Q61116 Prmt1-201ENSMUST00000045325 1071 ntTSL 5 BASIC20.09■□□□□ 0.81
Znf235Q61116 Theg-202ENSMUST00000077433 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC20.09■□□□□ 0.81
Retrieved 100 of 76,532 protein–RNA pairs in 52.1 ms