Protein–RNA interactions for Protein: Q3UHX8

Nkx6-3, Homeobox protein Nkx-6.3, mousemouse

Predictions only

Length 262 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx6-3Q3UHX8 Mgrn1-201ENSMUST00000023159 3293 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
Nkx6-3Q3UHX8 Gm8773-201ENSMUST00000101627 1268 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Nkx6-3Q3UHX8 Gm15298-201ENSMUST00000145916 1212 ntTSL 5 BASIC18.13■□□□□ 0.49
Nkx6-3Q3UHX8 Cd24a-201ENSMUST00000058714 1816 ntAPPRIS P2 TSL 1 (best) BASIC18.13■□□□□ 0.49
Nkx6-3Q3UHX8 Acot5-202ENSMUST00000072505 1401 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Nkx6-3Q3UHX8 Tm9sf3-201ENSMUST00000025989 6144 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Nkx6-3Q3UHX8 Sra1-201ENSMUST00000001415 2061 ntAPPRIS P4 TSL 5 BASIC18.13■□□□□ 0.49
Nkx6-3Q3UHX8 Gm26837-201ENSMUST00000180821 2110 ntTSL 5 BASIC18.13■□□□□ 0.49
Nkx6-3Q3UHX8 Gm37352-201ENSMUST00000193908 2181 ntBASIC18.13■□□□□ 0.49
Nkx6-3Q3UHX8 Gorasp2-203ENSMUST00000112205 1196 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
Nkx6-3Q3UHX8 Gm13534-201ENSMUST00000121169 513 ntBASIC18.12■□□□□ 0.49
Nkx6-3Q3UHX8 Mpc1-208ENSMUST00000155364 958 ntAPPRIS P1 TSL 2 BASIC18.12■□□□□ 0.49
Nkx6-3Q3UHX8 Trmt61a-202ENSMUST00000168338 2131 ntAPPRIS P1 TSL 5 BASIC18.12■□□□□ 0.49
Nkx6-3Q3UHX8 D830036C21Rik-201ENSMUST00000207444 453 ntTSL 3 BASIC18.12■□□□□ 0.49
Nkx6-3Q3UHX8 Gm7514-201ENSMUST00000209475 934 ntBASIC18.12■□□□□ 0.49
Nkx6-3Q3UHX8 AC121965.1-201ENSMUST00000221422 861 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
Nkx6-3Q3UHX8 Sds-201ENSMUST00000066540 1207 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Nkx6-3Q3UHX8 Chrac1-201ENSMUST00000089765 871 ntAPPRIS P2 TSL 1 (best) BASIC18.12■□□□□ 0.49
Nkx6-3Q3UHX8 Kdm1a-203ENSMUST00000116273 3008 ntAPPRIS P3 TSL 1 (best) BASIC18.12■□□□□ 0.49
Nkx6-3Q3UHX8 Pcyt2-203ENSMUST00000106188 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
Nkx6-3Q3UHX8 Tgfbr3l-201ENSMUST00000110993 1075 ntAPPRIS P1 TSL 5 BASIC18.11■□□□□ 0.49
Nkx6-3Q3UHX8 1700125G02Rik-201ENSMUST00000154947 519 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
Nkx6-3Q3UHX8 Gm27032-201ENSMUST00000183124 1116 ntBASIC18.11■□□□□ 0.49
Nkx6-3Q3UHX8 Ube2d-ps-204ENSMUST00000137510 1846 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
Nkx6-3Q3UHX8 Tcp11-201ENSMUST00000042692 1984 ntAPPRIS P3 TSL 1 (best) BASIC18.11■□□□□ 0.49
Nkx6-3Q3UHX8 D5Ertd579e-204ENSMUST00000140653 2014 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
Nkx6-3Q3UHX8 Nol9-202ENSMUST00000103197 2271 ntAPPRIS P3 TSL 1 (best) BASIC18.11■□□□□ 0.49
Nkx6-3Q3UHX8 Ghitm-201ENSMUST00000042564 2573 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Nkx6-3Q3UHX8 H2-Q7-201ENSMUST00000071951 1406 ntAPPRIS P2 TSL 1 (best) BASIC18.1■□□□□ 0.49
Nkx6-3Q3UHX8 H2-Q7-203ENSMUST00000078205 1419 ntTSL 5 BASIC18.1■□□□□ 0.49
Nkx6-3Q3UHX8 Tssk2-201ENSMUST00000055374 1387 ntAPPRIS P1 BASIC18.1■□□□□ 0.49
Nkx6-3Q3UHX8 Gm37179-201ENSMUST00000194862 823 ntBASIC18.1■□□□□ 0.49
Nkx6-3Q3UHX8 Stx6-209ENSMUST00000195302 955 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
Nkx6-3Q3UHX8 Fam228b-205ENSMUST00000218575 1281 ntAPPRIS ALT2 TSL 2 BASIC18.1■□□□□ 0.49
Nkx6-3Q3UHX8 Rin3-202ENSMUST00000101114 2394 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
Nkx6-3Q3UHX8 Mras-201ENSMUST00000035045 4701 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Nkx6-3Q3UHX8 Klhdc3-202ENSMUST00000165007 1973 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Nkx6-3Q3UHX8 Man2c1os-201ENSMUST00000125333 1910 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
Nkx6-3Q3UHX8 Golga7-201ENSMUST00000051094 1792 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Nkx6-3Q3UHX8 Zfp444-203ENSMUST00000108566 1648 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Nkx6-3Q3UHX8 D16Ertd472e-202ENSMUST00000114219 1576 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Nkx6-3Q3UHX8 Dnpep-204ENSMUST00000185797 2510 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
Nkx6-3Q3UHX8 Oaf-201ENSMUST00000034512 2526 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Nkx6-3Q3UHX8 Dxo-211ENSMUST00000180043 1447 ntAPPRIS P1 TSL 5 BASIC18.09■□□□□ 0.49
Nkx6-3Q3UHX8 Hs3st4-201ENSMUST00000106437 3189 ntAPPRIS P1 TSL 3 BASIC18.09■□□□□ 0.49
Nkx6-3Q3UHX8 Tmem54-203ENSMUST00000106064 1066 ntAPPRIS P3 TSL 1 (best) BASIC18.09■□□□□ 0.49
Nkx6-3Q3UHX8 Zfp444-202ENSMUST00000108565 849 ntTSL 3 BASIC18.09■□□□□ 0.49
Nkx6-3Q3UHX8 Gm9780-201ENSMUST00000184272 350 ntTSL 2 BASIC18.09■□□□□ 0.49
Nkx6-3Q3UHX8 Zfp125-203ENSMUST00000208744 928 ntTSL 5 BASIC18.09■□□□□ 0.49
Nkx6-3Q3UHX8 Ddost-201ENSMUST00000030538 2120 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Nkx6-3Q3UHX8 Med30-201ENSMUST00000037115 1007 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Nkx6-3Q3UHX8 6030419C18Rik-201ENSMUST00000085658 2139 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Nkx6-3Q3UHX8 Sephs1-202ENSMUST00000115019 2933 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Nkx6-3Q3UHX8 Bmpr1b-202ENSMUST00000098568 1910 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Nkx6-3Q3UHX8 Med25-201ENSMUST00000003049 2619 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
Nkx6-3Q3UHX8 Coq9-201ENSMUST00000034234 1789 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Nkx6-3Q3UHX8 Spg7-211ENSMUST00000153285 2481 ntAPPRIS ALT2 TSL 5 BASIC18.09■□□□□ 0.49
Nkx6-3Q3UHX8 Klhl8-201ENSMUST00000031254 3193 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Nkx6-3Q3UHX8 Ildr2-204ENSMUST00000192732 2263 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
Nkx6-3Q3UHX8 Dirc2-201ENSMUST00000023554 5395 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
Nkx6-3Q3UHX8 Plin1-202ENSMUST00000178257 1841 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Nkx6-3Q3UHX8 Rian-206ENSMUST00000182119 329 ntTSL 3 BASIC18.08■□□□□ 0.48
Nkx6-3Q3UHX8 Gm26571-205ENSMUST00000223215 591 ntTSL 3 BASIC18.08■□□□□ 0.48
Nkx6-3Q3UHX8 E4f1-201ENSMUST00000056032 2574 ntAPPRIS P2 TSL 1 (best) BASIC18.08■□□□□ 0.48
Nkx6-3Q3UHX8 Eml2-202ENSMUST00000117338 2765 ntAPPRIS ALT2 TSL 5 BASIC18.08■□□□□ 0.48
Nkx6-3Q3UHX8 1810055G02Rik-201ENSMUST00000039048 1882 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Nkx6-3Q3UHX8 Fam193b-201ENSMUST00000021957 4341 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Nkx6-3Q3UHX8 Unc50-201ENSMUST00000027285 1414 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Nkx6-3Q3UHX8 Kndc1-202ENSMUST00000121839 2210 ntTSL 2 BASIC18.07■□□□□ 0.48
Nkx6-3Q3UHX8 Lhx8-201ENSMUST00000177846 2076 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
Nkx6-3Q3UHX8 Ascl4-202ENSMUST00000170396 2016 ntAPPRIS P1 BASIC18.07■□□□□ 0.48
Nkx6-3Q3UHX8 1700003E16Rik-201ENSMUST00000032106 2020 ntAPPRIS P1 TSL 5 BASIC18.07■□□□□ 0.48
Nkx6-3Q3UHX8 Speg-206ENSMUST00000122266 917 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
Nkx6-3Q3UHX8 Gm45121-201ENSMUST00000205396 1153 ntTSL 5 BASIC18.07■□□□□ 0.48
Nkx6-3Q3UHX8 Nab2-202ENSMUST00000099157 2311 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
Nkx6-3Q3UHX8 Fgf3-201ENSMUST00000105898 2299 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Nkx6-3Q3UHX8 Mroh6-201ENSMUST00000184858 2216 ntAPPRIS P1 TSL 5 BASIC18.07■□□□□ 0.48
Nkx6-3Q3UHX8 Slc35a2-203ENSMUST00000115663 1527 ntAPPRIS P4 TSL 2 BASIC18.07■□□□□ 0.48
Nkx6-3Q3UHX8 Krt24-201ENSMUST00000017255 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Nkx6-3Q3UHX8 Gal3st3-201ENSMUST00000061169 2421 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Nkx6-3Q3UHX8 Rchy1-201ENSMUST00000031345 1967 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Nkx6-3Q3UHX8 Gm26660-201ENSMUST00000181582 2543 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
Nkx6-3Q3UHX8 Adgrv1-211ENSMUST00000146749 1592 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
Nkx6-3Q3UHX8 Hnrnpf-202ENSMUST00000163168 2401 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Nkx6-3Q3UHX8 C230062I16Rik-202ENSMUST00000207746 1022 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
Nkx6-3Q3UHX8 Tmem53-201ENSMUST00000062824 991 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Nkx6-3Q3UHX8 Snrpc-201ENSMUST00000071006 870 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Nkx6-3Q3UHX8 Scn1b-203ENSMUST00000211945 1501 ntAPPRIS P1 TSL 5 BASIC18.06■□□□□ 0.48
Nkx6-3Q3UHX8 Agfg1-202ENSMUST00000113444 3142 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
Nkx6-3Q3UHX8 Gm3667-201ENSMUST00000171906 2053 ntAPPRIS P1 TSL 5 BASIC18.05■□□□□ 0.48
Nkx6-3Q3UHX8 Ciapin1-201ENSMUST00000034233 1807 ntAPPRIS P1 TSL 5 BASIC18.05■□□□□ 0.48
Nkx6-3Q3UHX8 Nfe2l3-203ENSMUST00000160133 1125 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
Nkx6-3Q3UHX8 Tmem234-215ENSMUST00000173758 453 ntTSL 2 BASIC18.05■□□□□ 0.48
Nkx6-3Q3UHX8 4930413G21Rik-201ENSMUST00000205998 993 ntBASIC18.05■□□□□ 0.48
Nkx6-3Q3UHX8 A730056A06Rik-202ENSMUST00000206959 526 ntTSL 3 BASIC18.05■□□□□ 0.48
Nkx6-3Q3UHX8 Gm44732-201ENSMUST00000208055 635 ntTSL 3 BASIC18.05■□□□□ 0.48
Nkx6-3Q3UHX8 Zmiz2-201ENSMUST00000012612 4199 ntAPPRIS P2 TSL 5 BASIC18.05■□□□□ 0.48
Nkx6-3Q3UHX8 9430060I03Rik-201ENSMUST00000191563 1689 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
Nkx6-3Q3UHX8 Runx1-203ENSMUST00000168195 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
Nkx6-3Q3UHX8 Plekha1-211ENSMUST00000151119 2397 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
Retrieved 100 of 76,532 protein–RNA pairs in 26.8 ms