Protein–RNA interactions for Protein: S4R1G7

H2afb3, Histone H2A, mousemouse

Predictions only

Length 115 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H2afb3S4R1G7 Zfp91-201ENSMUST00000038627 5531 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
H2afb3S4R1G7 Lmo2-201ENSMUST00000111139 1434 ntTSL 5 BASIC22.55■■□□□ 1.2
H2afb3S4R1G7 Foxc1-201ENSMUST00000062292 5844 ntAPPRIS P1 BASIC22.55■■□□□ 1.2
H2afb3S4R1G7 Reep6-203ENSMUST00000105355 2127 ntAPPRIS ALT2 TSL 1 (best) BASIC22.54■■□□□ 1.2
H2afb3S4R1G7 Reep6-204ENSMUST00000105357 2127 ntTSL 1 (best) BASIC22.54■■□□□ 1.2
H2afb3S4R1G7 Grasp-201ENSMUST00000000543 2013 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
H2afb3S4R1G7 Sept11-208ENSMUST00000202308 1792 ntAPPRIS ALT1 TSL 5 BASIC22.54■■□□□ 1.2
H2afb3S4R1G7 Rab22a-202ENSMUST00000109110 849 ntTSL 5 BASIC22.54■■□□□ 1.2
H2afb3S4R1G7 Adap1-201ENSMUST00000110865 2557 ntAPPRIS P1 TSL 5 BASIC22.52■■□□□ 1.2
H2afb3S4R1G7 Paip1-203ENSMUST00000126957 1731 ntTSL 5 BASIC22.51■■□□□ 1.19
H2afb3S4R1G7 Btf3-201ENSMUST00000022163 1091 ntTSL 1 (best) BASIC22.51■■□□□ 1.19
H2afb3S4R1G7 Hnrnpd-202ENSMUST00000072750 1537 ntAPPRIS ALT2 TSL 3 BASIC22.51■■□□□ 1.19
H2afb3S4R1G7 Raly-201ENSMUST00000029120 1802 ntAPPRIS ALT2 TSL 5 BASIC22.49■■□□□ 1.19
H2afb3S4R1G7 Ppp1cc-201ENSMUST00000086294 1442 ntTSL 1 (best) BASIC22.48■■□□□ 1.19
H2afb3S4R1G7 Pfdn2-202ENSMUST00000135941 1735 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
H2afb3S4R1G7 Gm6206-201ENSMUST00000133472 2199 ntBASIC22.48■■□□□ 1.19
H2afb3S4R1G7 Micu3-201ENSMUST00000068999 2219 ntAPPRIS P1 TSL 5 BASIC22.46■■□□□ 1.19
H2afb3S4R1G7 Gm6345-201ENSMUST00000180378 1691 ntBASIC22.45■■□□□ 1.18
H2afb3S4R1G7 Rnf220-212ENSMUST00000221654 1949 ntTSL 1 (best) BASIC22.45■■□□□ 1.18
H2afb3S4R1G7 Rragc-201ENSMUST00000030399 2593 ntAPPRIS P1 TSL 1 (best) BASIC22.44■■□□□ 1.18
H2afb3S4R1G7 Gjc1-201ENSMUST00000068933 1903 ntAPPRIS P1 TSL 1 (best) BASIC22.44■■□□□ 1.18
H2afb3S4R1G7 Kcnmb4os2-201ENSMUST00000080943 1571 ntTSL 5 BASIC22.44■■□□□ 1.18
H2afb3S4R1G7 Sh3rf1-201ENSMUST00000034060 5479 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
H2afb3S4R1G7 Ctbp1-201ENSMUST00000079746 2279 ntAPPRIS P3 TSL 1 (best) BASIC22.42■■□□□ 1.18
H2afb3S4R1G7 Gm43445-201ENSMUST00000198564 2091 ntBASIC22.42■■□□□ 1.18
H2afb3S4R1G7 Terf2-203ENSMUST00000116425 2471 ntTSL 1 (best) BASIC22.41■■□□□ 1.18
H2afb3S4R1G7 Peli2-204ENSMUST00000226513 1320 ntBASIC22.41■■□□□ 1.18
H2afb3S4R1G7 Ubl4a-207ENSMUST00000178691 1038 ntAPPRIS P1 TSL 2 BASIC22.41■■□□□ 1.18
H2afb3S4R1G7 Cldnd1-201ENSMUST00000023426 2147 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
H2afb3S4R1G7 Orai1-201ENSMUST00000051016 1482 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
H2afb3S4R1G7 Epb41l4b-203ENSMUST00000095076 6746 ntAPPRIS ALT2 TSL 5 BASIC22.4■■□□□ 1.18
H2afb3S4R1G7 Fam136a-201ENSMUST00000071492 1643 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.18
H2afb3S4R1G7 Eif4e2-203ENSMUST00000113230 1569 ntTSL 1 (best) BASIC22.39■■□□□ 1.18
H2afb3S4R1G7 Cebpb-201ENSMUST00000070642 1504 ntAPPRIS P1 BASIC22.39■■□□□ 1.17
H2afb3S4R1G7 Nucks1-203ENSMUST00000189946 2375 ntAPPRIS ALT2 TSL 1 (best) BASIC22.38■■□□□ 1.17
H2afb3S4R1G7 Il17d-201ENSMUST00000089494 1274 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
H2afb3S4R1G7 Ube2m-201ENSMUST00000005714 1472 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
H2afb3S4R1G7 Runx3-202ENSMUST00000119564 1855 ntAPPRIS ALT2 TSL 1 (best) BASIC22.38■■□□□ 1.17
H2afb3S4R1G7 Chrna5-204ENSMUST00000217408 2446 ntTSL 1 (best) BASIC22.37■■□□□ 1.17
H2afb3S4R1G7 Zfp131-206ENSMUST00000223813 2561 ntAPPRIS P3 BASIC22.37■■□□□ 1.17
H2afb3S4R1G7 Homer3-202ENSMUST00000087467 880 ntTSL 1 (best) BASIC22.36■■□□□ 1.17
H2afb3S4R1G7 Fam120a-201ENSMUST00000060805 5105 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
H2afb3S4R1G7 Fxyd1-205ENSMUST00000205439 535 ntAPPRIS P1 TSL 5 BASIC22.35■■□□□ 1.17
H2afb3S4R1G7 Akt1s1-202ENSMUST00000107880 1757 ntAPPRIS P3 TSL 1 (best) BASIC22.35■■□□□ 1.17
H2afb3S4R1G7 Susd4-202ENSMUST00000153348 1898 ntAPPRIS P1 TSL 5 BASIC22.34■■□□□ 1.17
H2afb3S4R1G7 Mogs-201ENSMUST00000032114 2780 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
H2afb3S4R1G7 Gm26566-201ENSMUST00000181601 1038 ntAPPRIS P1 BASIC22.33■■□□□ 1.17
H2afb3S4R1G7 Guf1-201ENSMUST00000031113 1769 ntTSL 1 (best) BASIC22.33■■□□□ 1.16
H2afb3S4R1G7 Ssbp3-202ENSMUST00000072753 1924 ntTSL 1 (best) BASIC22.32■■□□□ 1.16
H2afb3S4R1G7 Ranbp1-202ENSMUST00000115645 1085 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
H2afb3S4R1G7 Zfp787-201ENSMUST00000094870 1897 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
H2afb3S4R1G7 Sap30l-201ENSMUST00000020826 1151 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
H2afb3S4R1G7 Vdac3-202ENSMUST00000179233 1423 ntAPPRIS ALT1 TSL 1 (best) BASIC22.31■■□□□ 1.16
H2afb3S4R1G7 Gm30346-201ENSMUST00000218641 1699 ntBASIC22.3■■□□□ 1.16
H2afb3S4R1G7 Smarcc1-203ENSMUST00000197480 1949 ntTSL 1 (best) BASIC22.29■■□□□ 1.16
H2afb3S4R1G7 Gm5814-201ENSMUST00000177586 378 ntAPPRIS P1 BASIC22.28■■□□□ 1.16
H2afb3S4R1G7 Mfsd5-201ENSMUST00000051341 1742 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
H2afb3S4R1G7 Ttc19-202ENSMUST00000101075 2193 ntAPPRIS ALT2 TSL 1 (best) BASIC22.27■■□□□ 1.16
H2afb3S4R1G7 Ildr2-205ENSMUST00000193860 2320 ntTSL 1 (best) BASIC22.26■■□□□ 1.15
H2afb3S4R1G7 Mrps7-201ENSMUST00000058109 1962 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
H2afb3S4R1G7 Bok-201ENSMUST00000027499 1468 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
H2afb3S4R1G7 Arl2bp-201ENSMUST00000034228 2063 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
H2afb3S4R1G7 E330040D14Rik-201ENSMUST00000192299 1374 ntBASIC22.25■■□□□ 1.15
H2afb3S4R1G7 Tmed7-203ENSMUST00000151189 1348 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
H2afb3S4R1G7 Gm7334-201ENSMUST00000061681 1356 ntAPPRIS P1 BASIC22.24■■□□□ 1.15
H2afb3S4R1G7 Dapk3-202ENSMUST00000178422 1730 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
H2afb3S4R1G7 B4galt7-202ENSMUST00000100764 2195 ntTSL 1 (best) BASIC22.23■■□□□ 1.15
H2afb3S4R1G7 Mast2-203ENSMUST00000106485 5705 ntAPPRIS ALT2 TSL 1 (best) BASIC22.23■■□□□ 1.15
H2afb3S4R1G7 Mast2-204ENSMUST00000106486 5723 ntAPPRIS P4 TSL 1 (best) BASIC22.23■■□□□ 1.15
H2afb3S4R1G7 Phlda1-201ENSMUST00000164773 1949 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
H2afb3S4R1G7 Tmem189-201ENSMUST00000006587 2329 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
H2afb3S4R1G7 Snf8-202ENSMUST00000107700 849 ntTSL 2 BASIC22.22■■□□□ 1.15
H2afb3S4R1G7 Trp53rkb-202ENSMUST00000065753 1375 ntTSL 1 (best) BASIC22.21■■□□□ 1.15
H2afb3S4R1G7 Rab2a-201ENSMUST00000060232 2133 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
H2afb3S4R1G7 Nrep-202ENSMUST00000168890 2185 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
H2afb3S4R1G7 Tbx1-201ENSMUST00000009241 1777 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
H2afb3S4R1G7 Rundc3a-204ENSMUST00000107105 1861 ntTSL 1 (best) BASIC22.2■■□□□ 1.14
H2afb3S4R1G7 Kdm2a-203ENSMUST00000116571 2413 ntTSL 1 (best) BASIC22.19■■□□□ 1.14
H2afb3S4R1G7 Bok-205ENSMUST00000201863 883 ntAPPRIS P1 TSL 5 BASIC22.19■■□□□ 1.14
H2afb3S4R1G7 Ube2f-202ENSMUST00000171112 1547 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
H2afb3S4R1G7 Rtn2-201ENSMUST00000032559 1990 ntAPPRIS P3 TSL 1 (best) BASIC22.19■■□□□ 1.14
H2afb3S4R1G7 4921531C22Rik-201ENSMUST00000150145 1905 ntTSL 1 (best) BASIC22.18■■□□□ 1.14
H2afb3S4R1G7 Pdia5-201ENSMUST00000023550 1808 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
H2afb3S4R1G7 Efemp2-201ENSMUST00000070118 1781 ntTSL 1 (best) BASIC22.18■■□□□ 1.14
H2afb3S4R1G7 Hmx1-201ENSMUST00000087674 1526 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
H2afb3S4R1G7 Smurf1-201ENSMUST00000085684 5343 ntAPPRIS P4 TSL 1 (best) BASIC22.17■■□□□ 1.14
H2afb3S4R1G7 Fam69b-201ENSMUST00000074240 1622 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
H2afb3S4R1G7 Clk2-203ENSMUST00000121931 2112 ntAPPRIS ALT1 TSL 5 BASIC22.16■■□□□ 1.14
H2afb3S4R1G7 Xkr7-201ENSMUST00000037235 2711 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
H2afb3S4R1G7 Ywhaq-202ENSMUST00000103002 2110 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
H2afb3S4R1G7 Gsk3a-201ENSMUST00000071739 2260 ntAPPRIS P2 TSL 2 BASIC22.15■■□□□ 1.14
H2afb3S4R1G7 Gm5601-202ENSMUST00000207161 1437 ntTSL 1 (best) BASIC22.14■■□□□ 1.14
H2afb3S4R1G7 Exosc6-201ENSMUST00000210390 1326 ntAPPRIS P1 BASIC22.14■■□□□ 1.14
H2afb3S4R1G7 Ndufaf6-201ENSMUST00000058183 1082 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.13
H2afb3S4R1G7 Cgref1-201ENSMUST00000031051 1442 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
H2afb3S4R1G7 Mpp6-203ENSMUST00000166318 2222 ntTSL 1 (best) BASIC22.12■■□□□ 1.13
H2afb3S4R1G7 Dtnb-211ENSMUST00000173240 2218 ntTSL 5 BASIC22.12■■□□□ 1.13
H2afb3S4R1G7 Cetn4-201ENSMUST00000071400 1808 ntTSL 5 BASIC22.12■■□□□ 1.13
H2afb3S4R1G7 Gm24804-201ENSMUST00000174982 85 ntBASIC22.11■■□□□ 1.13
H2afb3S4R1G7 Dda1-209ENSMUST00000147642 1865 ntTSL 2 BASIC22.1■■□□□ 1.13
Retrieved 100 of 76,532 protein–RNA pairs in 28 ms