Protein–RNA interactions for Protein: Q9Z1J2

Nek4, Serine/threonine-protein kinase Nek4, mousemouse

Predictions only

Length 792 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nek4Q9Z1J2 Kcnmb4os2-201ENSMUST00000080943 1571 ntTSL 5 BASIC30.95■■■□□ 2.54
Nek4Q9Z1J2 Hnrnpd-202ENSMUST00000072750 1537 ntAPPRIS ALT2 TSL 3 BASIC30.94■■■□□ 2.54
Nek4Q9Z1J2 Gm43445-201ENSMUST00000198564 2091 ntBASIC30.92■■■□□ 2.54
Nek4Q9Z1J2 Paip1-203ENSMUST00000126957 1731 ntTSL 5 BASIC30.92■■■□□ 2.54
Nek4Q9Z1J2 Ttc19-202ENSMUST00000101075 2193 ntAPPRIS ALT2 TSL 1 (best) BASIC30.91■■■□□ 2.54
Nek4Q9Z1J2 Pfdn2-202ENSMUST00000135941 1735 ntAPPRIS P1 TSL 1 (best) BASIC30.91■■■□□ 2.54
Nek4Q9Z1J2 Akt1s1-202ENSMUST00000107880 1757 ntAPPRIS P3 TSL 1 (best) BASIC30.9■■■□□ 2.54
Nek4Q9Z1J2 Sap30l-201ENSMUST00000020826 1151 ntAPPRIS P1 TSL 1 (best) BASIC30.9■■■□□ 2.54
Nek4Q9Z1J2 Peli2-204ENSMUST00000226513 1320 ntBASIC30.9■■■□□ 2.54
Nek4Q9Z1J2 Btf3-201ENSMUST00000022163 1091 ntTSL 1 (best) BASIC30.89■■■□□ 2.54
Nek4Q9Z1J2 Il17d-201ENSMUST00000089494 1274 ntAPPRIS P1 TSL 1 (best) BASIC30.89■■■□□ 2.54
Nek4Q9Z1J2 Fam136a-201ENSMUST00000071492 1643 ntAPPRIS P1 TSL 1 (best) BASIC30.88■■■□□ 2.53
Nek4Q9Z1J2 Homer3-202ENSMUST00000087467 880 ntTSL 1 (best) BASIC30.88■■■□□ 2.53
Nek4Q9Z1J2 Runx3-202ENSMUST00000119564 1855 ntAPPRIS ALT2 TSL 1 (best) BASIC30.86■■■□□ 2.53
Nek4Q9Z1J2 Vdac3-202ENSMUST00000179233 1423 ntAPPRIS ALT1 TSL 1 (best) BASIC30.85■■■□□ 2.53
Nek4Q9Z1J2 Adgrb2-207ENSMUST00000120204 5170 ntAPPRIS ALT2 TSL 1 (best) BASIC30.85■■■□□ 2.53
Nek4Q9Z1J2 Zxdb-201ENSMUST00000101388 5619 ntAPPRIS P1 BASIC30.84■■■□□ 2.53
Nek4Q9Z1J2 Cldnd1-201ENSMUST00000023426 2147 ntAPPRIS P1 TSL 1 (best) BASIC30.82■■■□□ 2.52
Nek4Q9Z1J2 Gm6345-201ENSMUST00000180378 1691 ntBASIC30.81■■■□□ 2.52
Nek4Q9Z1J2 Ssbp3-202ENSMUST00000072753 1924 ntTSL 1 (best) BASIC30.8■■■□□ 2.52
Nek4Q9Z1J2 Susd4-202ENSMUST00000153348 1898 ntAPPRIS P1 TSL 5 BASIC30.78■■■□□ 2.52
Nek4Q9Z1J2 Tmed7-203ENSMUST00000151189 1348 ntAPPRIS P1 TSL 1 (best) BASIC30.78■■■□□ 2.52
Nek4Q9Z1J2 Mfsd5-201ENSMUST00000051341 1742 ntAPPRIS P1 TSL 1 (best) BASIC30.76■■■□□ 2.52
Nek4Q9Z1J2 Eif4e2-203ENSMUST00000113230 1569 ntTSL 1 (best) BASIC30.76■■■□□ 2.52
Nek4Q9Z1J2 Gm26566-201ENSMUST00000181601 1038 ntAPPRIS P1 BASIC30.76■■■□□ 2.51
Nek4Q9Z1J2 Gm30346-201ENSMUST00000218641 1699 ntBASIC30.76■■■□□ 2.51
Nek4Q9Z1J2 Smarcc1-203ENSMUST00000197480 1949 ntTSL 1 (best) BASIC30.76■■■□□ 2.51
Nek4Q9Z1J2 Ildr2-205ENSMUST00000193860 2320 ntTSL 1 (best) BASIC30.75■■■□□ 2.51
Nek4Q9Z1J2 Cebpb-201ENSMUST00000070642 1504 ntAPPRIS P1 BASIC30.75■■■□□ 2.51
Nek4Q9Z1J2 Terf2-203ENSMUST00000116425 2471 ntTSL 1 (best) BASIC30.75■■■□□ 2.51
Nek4Q9Z1J2 Ube2m-201ENSMUST00000005714 1472 ntAPPRIS P1 TSL 1 (best) BASIC30.75■■■□□ 2.51
Nek4Q9Z1J2 Snf8-202ENSMUST00000107700 849 ntTSL 2 BASIC30.74■■■□□ 2.51
Nek4Q9Z1J2 Mrps7-201ENSMUST00000058109 1962 ntAPPRIS P1 TSL 1 (best) BASIC30.74■■■□□ 2.51
Nek4Q9Z1J2 Ubl4a-207ENSMUST00000178691 1038 ntAPPRIS P1 TSL 2 BASIC30.73■■■□□ 2.51
Nek4Q9Z1J2 Fxyd1-205ENSMUST00000205439 535 ntAPPRIS P1 TSL 5 BASIC30.73■■■□□ 2.51
Nek4Q9Z1J2 Zfp787-201ENSMUST00000094870 1897 ntAPPRIS P1 TSL 1 (best) BASIC30.73■■■□□ 2.51
Nek4Q9Z1J2 Orai1-201ENSMUST00000051016 1482 ntAPPRIS P1 TSL 1 (best) BASIC30.71■■■□□ 2.51
Nek4Q9Z1J2 Tmem189-201ENSMUST00000006587 2329 ntAPPRIS P1 TSL 1 (best) BASIC30.7■■■□□ 2.5
Nek4Q9Z1J2 Guf1-201ENSMUST00000031113 1769 ntTSL 1 (best) BASIC30.68■■■□□ 2.5
Nek4Q9Z1J2 Phlda1-201ENSMUST00000164773 1949 ntAPPRIS P1 TSL 1 (best) BASIC30.67■■■□□ 2.5
Nek4Q9Z1J2 Ube2f-202ENSMUST00000171112 1547 ntAPPRIS P1 TSL 1 (best) BASIC30.66■■■□□ 2.5
Nek4Q9Z1J2 Gsk3a-201ENSMUST00000071739 2260 ntAPPRIS P2 TSL 2 BASIC30.66■■■□□ 2.5
Nek4Q9Z1J2 Arl2bp-201ENSMUST00000034228 2063 ntAPPRIS P1 TSL 1 (best) BASIC30.64■■■□□ 2.5
Nek4Q9Z1J2 B4galt7-202ENSMUST00000100764 2195 ntTSL 1 (best) BASIC30.64■■■□□ 2.49
Nek4Q9Z1J2 4921531C22Rik-201ENSMUST00000150145 1905 ntTSL 1 (best) BASIC30.63■■■□□ 2.49
Nek4Q9Z1J2 Rab2a-201ENSMUST00000060232 2133 ntAPPRIS P1 TSL 1 (best) BASIC30.62■■■□□ 2.49
Nek4Q9Z1J2 Bok-201ENSMUST00000027499 1468 ntAPPRIS P1 TSL 1 (best) BASIC30.61■■■□□ 2.49
Nek4Q9Z1J2 Dapk3-202ENSMUST00000178422 1730 ntAPPRIS P1 TSL 1 (best) BASIC30.6■■■□□ 2.49
Nek4Q9Z1J2 Mpp6-203ENSMUST00000166318 2222 ntTSL 1 (best) BASIC30.59■■■□□ 2.49
Nek4Q9Z1J2 Ranbp1-202ENSMUST00000115645 1085 ntAPPRIS P1 TSL 1 (best) BASIC30.59■■■□□ 2.49
Nek4Q9Z1J2 Kdm2a-203ENSMUST00000116571 2413 ntTSL 1 (best) BASIC30.59■■■□□ 2.49
Nek4Q9Z1J2 Amer2-203ENSMUST00000225247 2662 ntBASIC30.58■■■□□ 2.49
Nek4Q9Z1J2 Gm5601-202ENSMUST00000207161 1437 ntTSL 1 (best) BASIC30.57■■■□□ 2.48
Nek4Q9Z1J2 Clk2-203ENSMUST00000121931 2112 ntAPPRIS ALT1 TSL 5 BASIC30.57■■■□□ 2.48
Nek4Q9Z1J2 Fam69b-201ENSMUST00000074240 1622 ntAPPRIS P1 TSL 1 (best) BASIC30.56■■■□□ 2.48
Nek4Q9Z1J2 Efemp2-201ENSMUST00000070118 1781 ntTSL 1 (best) BASIC30.56■■■□□ 2.48
Nek4Q9Z1J2 Bok-205ENSMUST00000201863 883 ntAPPRIS P1 TSL 5 BASIC30.55■■■□□ 2.48
Nek4Q9Z1J2 Dpf1-204ENSMUST00000108231 2040 ntTSL 5 BASIC30.55■■■□□ 2.48
Nek4Q9Z1J2 Gm7334-201ENSMUST00000061681 1356 ntAPPRIS P1 BASIC30.54■■■□□ 2.48
Nek4Q9Z1J2 Rundc3a-204ENSMUST00000107105 1861 ntTSL 1 (best) BASIC30.54■■■□□ 2.48
Nek4Q9Z1J2 Ywhaq-202ENSMUST00000103002 2110 ntAPPRIS P1 TSL 1 (best) BASIC30.52■■■□□ 2.48
Nek4Q9Z1J2 Hmx1-201ENSMUST00000087674 1526 ntAPPRIS P1 TSL 1 (best) BASIC30.51■■■□□ 2.47
Nek4Q9Z1J2 Cgref1-201ENSMUST00000031051 1442 ntAPPRIS P1 TSL 1 (best) BASIC30.5■■■□□ 2.47
Nek4Q9Z1J2 Ndufaf6-201ENSMUST00000058183 1082 ntAPPRIS P1 TSL 1 (best) BASIC30.5■■■□□ 2.47
Nek4Q9Z1J2 Nucks1-203ENSMUST00000189946 2375 ntAPPRIS ALT2 TSL 1 (best) BASIC30.49■■■□□ 2.47
Nek4Q9Z1J2 Dtnb-211ENSMUST00000173240 2218 ntTSL 5 BASIC30.49■■■□□ 2.47
Nek4Q9Z1J2 Gm24804-201ENSMUST00000174982 85 ntBASIC30.49■■■□□ 2.47
Nek4Q9Z1J2 E330040D14Rik-201ENSMUST00000192299 1374 ntBASIC30.49■■■□□ 2.47
Nek4Q9Z1J2 Trp53rkb-202ENSMUST00000065753 1375 ntTSL 1 (best) BASIC30.49■■■□□ 2.47
Nek4Q9Z1J2 Pdia5-201ENSMUST00000023550 1808 ntAPPRIS P1 TSL 1 (best) BASIC30.47■■■□□ 2.47
Nek4Q9Z1J2 Ssx2ip-202ENSMUST00000106149 2416 ntAPPRIS ALT2 TSL 1 (best) BASIC30.46■■■□□ 2.47
Nek4Q9Z1J2 Clk2-201ENSMUST00000090927 2128 ntAPPRIS ALT1 TSL 1 (best) BASIC30.46■■■□□ 2.47
Nek4Q9Z1J2 Gm5814-201ENSMUST00000177586 378 ntAPPRIS P1 BASIC30.45■■■□□ 2.47
Nek4Q9Z1J2 Ppp1r14c-202ENSMUST00000217573 2013 ntTSL 1 (best) BASIC30.43■■■□□ 2.46
Nek4Q9Z1J2 Exosc6-201ENSMUST00000210390 1326 ntAPPRIS P1 BASIC30.42■■■□□ 2.46
Nek4Q9Z1J2 Tbx1-201ENSMUST00000009241 1777 ntAPPRIS P1 TSL 1 (best) BASIC30.41■■■□□ 2.46
Nek4Q9Z1J2 Coq10a-207ENSMUST00000220227 1434 ntAPPRIS ALT2 TSL 5 BASIC30.41■■■□□ 2.46
Nek4Q9Z1J2 Mapk13-201ENSMUST00000004986 1392 ntAPPRIS P1 TSL 1 (best) BASIC30.41■■■□□ 2.46
Nek4Q9Z1J2 Hdgf-201ENSMUST00000005017 2245 ntAPPRIS P1 TSL 1 (best) BASIC30.4■■■□□ 2.46
Nek4Q9Z1J2 Cetn4-201ENSMUST00000071400 1808 ntTSL 5 BASIC30.4■■■□□ 2.46
Nek4Q9Z1J2 A530058N18Rik-201ENSMUST00000128469 646 ntTSL 2 BASIC30.39■■■□□ 2.46
Nek4Q9Z1J2 Mef2a-201ENSMUST00000032776 2476 ntAPPRIS P1 TSL 1 (best) BASIC30.37■■■□□ 2.45
Nek4Q9Z1J2 Srp9-202ENSMUST00000111018 823 ntTSL 1 (best) BASIC30.36■■■□□ 2.45
Nek4Q9Z1J2 Phf23-205ENSMUST00000135814 2214 ntTSL 1 (best) BASIC30.35■■■□□ 2.45
Nek4Q9Z1J2 Gm17494-201ENSMUST00000072769 1800 ntTSL 1 (best) BASIC30.35■■■□□ 2.45
Nek4Q9Z1J2 Mypop-203ENSMUST00000131087 1951 ntAPPRIS P1 TSL 5 BASIC30.34■■■□□ 2.45
Nek4Q9Z1J2 Aspscr1-201ENSMUST00000026135 1820 ntAPPRIS P1 TSL 1 (best) BASIC30.33■■■□□ 2.45
Nek4Q9Z1J2 Gsk3a-202ENSMUST00000108411 2248 ntAPPRIS ALT2 TSL 5 BASIC30.32■■■□□ 2.45
Nek4Q9Z1J2 Dcaf15-202ENSMUST00000210279 2199 ntAPPRIS P1 TSL 1 (best) BASIC30.32■■■□□ 2.44
Nek4Q9Z1J2 Rtn2-201ENSMUST00000032559 1990 ntAPPRIS P3 TSL 1 (best) BASIC30.32■■■□□ 2.44
Nek4Q9Z1J2 Gm960-202ENSMUST00000177696 2262 ntAPPRIS P2 TSL 5 BASIC30.31■■■□□ 2.44
Nek4Q9Z1J2 Rheb-201ENSMUST00000030787 1784 ntAPPRIS P1 TSL 1 (best) BASIC30.3■■■□□ 2.44
Nek4Q9Z1J2 Irx4-201ENSMUST00000022095 2589 ntAPPRIS P1 TSL 1 (best) BASIC30.3■■■□□ 2.44
Nek4Q9Z1J2 Pitpna-205ENSMUST00000179445 1665 ntAPPRIS ALT1 TSL 5 BASIC30.3■■■□□ 2.44
Nek4Q9Z1J2 Vstm2l-201ENSMUST00000109523 1363 ntAPPRIS P1 TSL 5 BASIC30.29■■■□□ 2.44
Nek4Q9Z1J2 Galnt12-202ENSMUST00000107744 2077 ntTSL 1 (best) BASIC30.29■■■□□ 2.44
Nek4Q9Z1J2 Yif1b-202ENSMUST00000108237 1086 ntTSL 5 BASIC30.29■■■□□ 2.44
Nek4Q9Z1J2 Sh3glb2-203ENSMUST00000113620 1694 ntTSL 1 (best) BASIC30.29■■■□□ 2.44
Nek4Q9Z1J2 Plekha3-201ENSMUST00000111920 2534 ntAPPRIS P1 TSL 1 (best) BASIC30.29■■■□□ 2.44
Nek4Q9Z1J2 Caap1-201ENSMUST00000030313 2107 ntAPPRIS P1 TSL 1 (best) BASIC30.28■■■□□ 2.44
Retrieved 100 of 76,532 protein–RNA pairs in 101.8 ms