Protein–RNA interactions for Protein: Q9JJ48

Zc3h8, Zinc finger CCCH domain-containing protein 8, mousemouse

Known RBP Predictions only

Length 305 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Zc3h8Q9JJ48 Tdp2-203ENSMUST00000223804 1136 ntBASIC23.76■■□□□ 1.39
Zc3h8Q9JJ48 Rhobtb3-202ENSMUST00000109606 1676 ntTSL 1 (best) BASIC23.76■■□□□ 1.39
Zc3h8Q9JJ48 Six3-202ENSMUST00000175898 2419 ntAPPRIS P2 TSL 1 (best) BASIC23.73■■□□□ 1.39
Zc3h8Q9JJ48 Cxxc4-203ENSMUST00000181904 5694 ntAPPRIS P2 TSL 5 BASIC23.73■■□□□ 1.39
Zc3h8Q9JJ48 Tpm1-216ENSMUST00000113707 1898 ntTSL 1 (best) BASIC23.73■■□□□ 1.39
Zc3h8Q9JJ48 Fam136a-201ENSMUST00000071492 1643 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
Zc3h8Q9JJ48 Reep6-203ENSMUST00000105355 2127 ntAPPRIS ALT2 TSL 1 (best) BASIC23.7■■□□□ 1.38
Zc3h8Q9JJ48 Reep6-204ENSMUST00000105357 2127 ntTSL 1 (best) BASIC23.7■■□□□ 1.38
Zc3h8Q9JJ48 Gm5814-201ENSMUST00000177586 378 ntAPPRIS P1 BASIC23.68■■□□□ 1.38
Zc3h8Q9JJ48 Phlda1-201ENSMUST00000164773 1949 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
Zc3h8Q9JJ48 Sowahd-201ENSMUST00000060057 1574 ntAPPRIS P1 BASIC23.68■■□□□ 1.38
Zc3h8Q9JJ48 Pfn2-202ENSMUST00000119344 1879 ntTSL 1 (best) BASIC23.66■■□□□ 1.38
Zc3h8Q9JJ48 Gm7334-201ENSMUST00000061681 1356 ntAPPRIS P1 BASIC23.66■■□□□ 1.38
Zc3h8Q9JJ48 Fbxo6-201ENSMUST00000030858 1346 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
Zc3h8Q9JJ48 Rab7-204ENSMUST00000113598 2031 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
Zc3h8Q9JJ48 6530409C15Rik-202ENSMUST00000143551 1573 ntTSL 1 (best) BASIC23.65■■□□□ 1.38
Zc3h8Q9JJ48 Rnd2-201ENSMUST00000001347 1394 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.37
Zc3h8Q9JJ48 Lactb-201ENSMUST00000034929 2031 ntAPPRIS P1 TSL 1 (best) BASIC23.62■■□□□ 1.37
Zc3h8Q9JJ48 Akt1s1-202ENSMUST00000107880 1757 ntAPPRIS P3 TSL 1 (best) BASIC23.6■■□□□ 1.37
Zc3h8Q9JJ48 Dedd-201ENSMUST00000064950 1618 ntAPPRIS P1 TSL 1 (best) BASIC23.6■■□□□ 1.37
Zc3h8Q9JJ48 1190005I06Rik-201ENSMUST00000123927 844 ntAPPRIS P2 TSL 1 (best) BASIC23.59■■□□□ 1.37
Zc3h8Q9JJ48 Fcnaos-201ENSMUST00000127642 1351 ntTSL 1 (best) BASIC23.58■■□□□ 1.37
Zc3h8Q9JJ48 Phf10-201ENSMUST00000024657 1663 ntAPPRIS P1 TSL 1 (best) BASIC23.57■■□□□ 1.36
Zc3h8Q9JJ48 Znrf3-202ENSMUST00000143746 1022 ntTSL 1 (best) BASIC23.57■■□□□ 1.36
Zc3h8Q9JJ48 Macrod1-201ENSMUST00000040261 1274 ntAPPRIS P1 TSL 1 (best) BASIC23.57■■□□□ 1.36
Zc3h8Q9JJ48 Gnas-207ENSMUST00000109085 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC23.55■■□□□ 1.36
Zc3h8Q9JJ48 Gm9397-201ENSMUST00000200125 605 ntBASIC23.54■■□□□ 1.36
Zc3h8Q9JJ48 Hmx1-201ENSMUST00000087674 1526 ntAPPRIS P1 TSL 1 (best) BASIC23.54■■□□□ 1.36
Zc3h8Q9JJ48 Hoxd8-201ENSMUST00000019749 2634 ntAPPRIS P3 TSL 1 (best) BASIC23.53■■□□□ 1.36
Zc3h8Q9JJ48 Gm45855-201ENSMUST00000212546 880 ntBASIC23.53■■□□□ 1.36
Zc3h8Q9JJ48 March2-205ENSMUST00000173015 1418 ntTSL 3 BASIC23.52■■□□□ 1.36
Zc3h8Q9JJ48 Gm30346-201ENSMUST00000218641 1699 ntBASIC23.52■■□□□ 1.36
Zc3h8Q9JJ48 Gm527-201ENSMUST00000058135 1468 ntAPPRIS P1 TSL 1 (best) BASIC23.52■■□□□ 1.36
Zc3h8Q9JJ48 Hrh3-208ENSMUST00000171736 906 ntTSL 5 BASIC23.52■■□□□ 1.36
Zc3h8Q9JJ48 Capns1-201ENSMUST00000001845 1600 ntAPPRIS P2 TSL 5 BASIC23.51■■□□□ 1.35
Zc3h8Q9JJ48 Fam117a-201ENSMUST00000037502 2317 ntAPPRIS P1 TSL 1 (best) BASIC23.5■■□□□ 1.35
Zc3h8Q9JJ48 Junos-204ENSMUST00000128094 830 ntTSL 1 (best) BASIC23.49■■□□□ 1.35
Zc3h8Q9JJ48 BC037032-205ENSMUST00000187080 508 ntTSL 5 BASIC23.49■■□□□ 1.35
Zc3h8Q9JJ48 Qrich1-209ENSMUST00000194385 975 ntTSL 2 BASIC23.48■■□□□ 1.35
Zc3h8Q9JJ48 1110008F13Rik-201ENSMUST00000029165 1045 ntAPPRIS P1 TSL 1 (best) BASIC23.48■■□□□ 1.35
Zc3h8Q9JJ48 Tcte2-204ENSMUST00000130033 1462 ntAPPRIS ALT2 TSL 1 (best) BASIC23.48■■□□□ 1.35
Zc3h8Q9JJ48 Nrtn-201ENSMUST00000044752 1023 ntAPPRIS P1 TSL 1 (best) BASIC23.47■■□□□ 1.35
Zc3h8Q9JJ48 Eif4e2-203ENSMUST00000113230 1569 ntTSL 1 (best) BASIC23.45■■□□□ 1.34
Zc3h8Q9JJ48 Ywhaq-202ENSMUST00000103002 2110 ntAPPRIS P1 TSL 1 (best) BASIC23.44■■□□□ 1.34
Zc3h8Q9JJ48 Ring1-201ENSMUST00000025183 2034 ntAPPRIS P1 TSL 1 (best) BASIC23.44■■□□□ 1.34
Zc3h8Q9JJ48 Cdk2ap1-201ENSMUST00000031341 1315 ntAPPRIS P2 TSL 1 (best) BASIC23.43■■□□□ 1.34
Zc3h8Q9JJ48 Gtf2a2-203ENSMUST00000119413 1034 ntAPPRIS P1 TSL 1 (best) BASIC23.43■■□□□ 1.34
Zc3h8Q9JJ48 Cyp26a1-201ENSMUST00000025946 1773 ntAPPRIS P1 TSL 1 (best) BASIC23.42■■□□□ 1.34
Zc3h8Q9JJ48 Gm527-203ENSMUST00000220993 1090 ntTSL 5 BASIC23.42■■□□□ 1.34
Zc3h8Q9JJ48 Pitpna-205ENSMUST00000179445 1665 ntAPPRIS ALT1 TSL 5 BASIC23.41■■□□□ 1.34
Zc3h8Q9JJ48 Crem-227ENSMUST00000149803 1422 ntTSL 1 (best) BASIC23.41■■□□□ 1.34
Zc3h8Q9JJ48 Ldb1-206ENSMUST00000152946 2108 ntAPPRIS ALT1 TSL 5 BASIC23.41■■□□□ 1.34
Zc3h8Q9JJ48 Egr3-201ENSMUST00000035908 1509 ntAPPRIS ALT1 TSL 1 (best) BASIC23.4■■□□□ 1.34
Zc3h8Q9JJ48 1810026B05Rik-206ENSMUST00000187421 519 ntTSL 3 BASIC23.4■■□□□ 1.34
Zc3h8Q9JJ48 Dtnbp1-201ENSMUST00000072329 1362 ntAPPRIS P2 TSL 1 (best) BASIC23.4■■□□□ 1.34
Zc3h8Q9JJ48 Cebpb-201ENSMUST00000070642 1504 ntAPPRIS P1 BASIC23.39■■□□□ 1.34
Zc3h8Q9JJ48 Mthfd2l-203ENSMUST00000202781 688 ntTSL 1 (best) BASIC23.38■■□□□ 1.33
Zc3h8Q9JJ48 Ythdf1-202ENSMUST00000108876 2272 ntTSL 1 (best) BASIC23.38■■□□□ 1.33
Zc3h8Q9JJ48 Rpl19-ps4-201ENSMUST00000167150 625 ntBASIC23.37■■□□□ 1.33
Zc3h8Q9JJ48 Gm15672-201ENSMUST00000151512 1354 ntTSL 1 (best) BASIC23.37■■□□□ 1.33
Zc3h8Q9JJ48 Mtch1-201ENSMUST00000095427 1922 ntAPPRIS P3 TSL 1 (best) BASIC23.37■■□□□ 1.33
Zc3h8Q9JJ48 Gm45716-202ENSMUST00000134929 2031 ntAPPRIS P1 TSL 1 (best) BASIC23.37■■□□□ 1.33
Zc3h8Q9JJ48 Pradc1-202ENSMUST00000113770 610 ntTSL 1 (best) BASIC23.36■■□□□ 1.33
Zc3h8Q9JJ48 Gm24970-201ENSMUST00000175582 82 ntBASIC23.36■■□□□ 1.33
Zc3h8Q9JJ48 1810026B05Rik-202ENSMUST00000184554 782 ntTSL 3 BASIC23.36■■□□□ 1.33
Zc3h8Q9JJ48 Smad7-202ENSMUST00000168918 1882 ntAPPRIS P1 TSL 1 (best) BASIC23.36■■□□□ 1.33
Zc3h8Q9JJ48 Gjc1-201ENSMUST00000068933 1903 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
Zc3h8Q9JJ48 Srp9-201ENSMUST00000027792 1367 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
Zc3h8Q9JJ48 Stard3nl-210ENSMUST00000222869 1030 ntTSL 5 BASIC23.34■■□□□ 1.33
Zc3h8Q9JJ48 St3gal5-201ENSMUST00000069994 2258 ntAPPRIS P3 TSL 1 (best) BASIC23.33■■□□□ 1.33
Zc3h8Q9JJ48 Triobp-206ENSMUST00000130663 1660 ntAPPRIS ALT2 TSL 5 BASIC23.33■■□□□ 1.33
Zc3h8Q9JJ48 Tnfsfm13-201ENSMUST00000108649 1049 ntAPPRIS ALT2 TSL 5 BASIC23.33■■□□□ 1.33
Zc3h8Q9JJ48 Mrps7-201ENSMUST00000058109 1962 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
Zc3h8Q9JJ48 Nrg3-202ENSMUST00000168810 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC23.31■■□□□ 1.32
Zc3h8Q9JJ48 Ywhah-201ENSMUST00000019109 1764 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
Zc3h8Q9JJ48 Twist1-201ENSMUST00000049089 1628 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
Zc3h8Q9JJ48 Kmt5a-202ENSMUST00000100709 1425 ntTSL 1 (best) BASIC23.3■■□□□ 1.32
Zc3h8Q9JJ48 Hoxa13-203ENSMUST00000147595 2395 ntAPPRIS P5 TSL 5 BASIC23.29■■□□□ 1.32
Zc3h8Q9JJ48 Tmem243-201ENSMUST00000115365 1040 ntAPPRIS P1 TSL 2 BASIC23.28■■□□□ 1.32
Zc3h8Q9JJ48 Lsm4-204ENSMUST00000210071 575 ntTSL 5 BASIC23.28■■□□□ 1.32
Zc3h8Q9JJ48 C2cd4d-201ENSMUST00000169433 1321 ntAPPRIS P1 TSL 3 BASIC23.28■■□□□ 1.32
Zc3h8Q9JJ48 A430072P03Rik-201ENSMUST00000161480 1510 ntTSL 1 (best) BASIC23.28■■□□□ 1.32
Zc3h8Q9JJ48 Crip2-201ENSMUST00000084882 1439 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
Zc3h8Q9JJ48 Smarcc2-205ENSMUST00000218228 603 ntTSL 5 BASIC23.27■■□□□ 1.32
Zc3h8Q9JJ48 Gm43863-201ENSMUST00000203822 1192 ntBASIC23.26■■□□□ 1.31
Zc3h8Q9JJ48 Tbcel-204ENSMUST00000128959 1535 ntAPPRIS P1 TSL 5 BASIC23.26■■□□□ 1.31
Zc3h8Q9JJ48 C530008M17Rik-201ENSMUST00000086909 1844 ntBASIC23.26■■□□□ 1.31
Zc3h8Q9JJ48 Mxra7-202ENSMUST00000047715 757 ntAPPRIS ALT2 TSL 1 (best) BASIC23.25■■□□□ 1.31
Zc3h8Q9JJ48 Dlx6os2-201ENSMUST00000178206 1354 ntBASIC23.25■■□□□ 1.31
Zc3h8Q9JJ48 Cnot6l-203ENSMUST00000122003 2089 ntTSL 1 (best) BASIC23.24■■□□□ 1.31
Zc3h8Q9JJ48 A530058N18Rik-208ENSMUST00000131299 1387 ntTSL 2 BASIC23.24■■□□□ 1.31
Zc3h8Q9JJ48 Dapk3-202ENSMUST00000178422 1730 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
Zc3h8Q9JJ48 Noxo1-201ENSMUST00000019464 2238 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
Zc3h8Q9JJ48 Mfsd5-201ENSMUST00000051341 1742 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
Zc3h8Q9JJ48 Rheb-201ENSMUST00000030787 1784 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
Zc3h8Q9JJ48 Gm20503-201ENSMUST00000174664 1294 ntAPPRIS P1 TSL 5 BASIC23.21■■□□□ 1.31
Zc3h8Q9JJ48 Pradc1-201ENSMUST00000032080 1038 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
Zc3h8Q9JJ48 Snx3-201ENSMUST00000019939 1401 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
Zc3h8Q9JJ48 Rbm17-201ENSMUST00000040314 1599 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
Zc3h8Q9JJ48 Susd4-202ENSMUST00000153348 1898 ntAPPRIS P1 TSL 5 BASIC23.21■■□□□ 1.31
Retrieved 100 of 76,532 protein–RNA pairs in 19.9 ms