Protein–RNA interactions for Protein: Q9D361

Snrnp48, U11/U12 small nuclear ribonucleoprotein 48 kDa protein, mousemouse

Predictions only

Length 337 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Snrnp48Q9D361 A530058N18Rik-201ENSMUST00000128469 646 ntTSL 2 BASIC25.42■■□□□ 1.66
Snrnp48Q9D361 Gnas-207ENSMUST00000109085 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC25.41■■□□□ 1.66
Snrnp48Q9D361 Bok-201ENSMUST00000027499 1468 ntAPPRIS P1 TSL 1 (best) BASIC25.41■■□□□ 1.66
Snrnp48Q9D361 Ring1-201ENSMUST00000025183 2034 ntAPPRIS P1 TSL 1 (best) BASIC25.41■■□□□ 1.66
Snrnp48Q9D361 Smad7-202ENSMUST00000168918 1882 ntAPPRIS P1 TSL 1 (best) BASIC25.4■■□□□ 1.66
Snrnp48Q9D361 Reep6-203ENSMUST00000105355 2127 ntAPPRIS ALT2 TSL 1 (best) BASIC25.4■■□□□ 1.66
Snrnp48Q9D361 Reep6-204ENSMUST00000105357 2127 ntTSL 1 (best) BASIC25.4■■□□□ 1.66
Snrnp48Q9D361 Ube2f-202ENSMUST00000171112 1547 ntAPPRIS P1 TSL 1 (best) BASIC25.39■■□□□ 1.66
Snrnp48Q9D361 Ywhah-201ENSMUST00000019109 1764 ntAPPRIS P1 TSL 1 (best) BASIC25.39■■□□□ 1.65
Snrnp48Q9D361 AI837181-202ENSMUST00000159759 1515 ntAPPRIS P1 TSL 1 (best) BASIC25.38■■□□□ 1.65
Snrnp48Q9D361 Gm45716-202ENSMUST00000134929 2031 ntAPPRIS P1 TSL 1 (best) BASIC25.38■■□□□ 1.65
Snrnp48Q9D361 Cnot6l-203ENSMUST00000122003 2089 ntTSL 1 (best) BASIC25.38■■□□□ 1.65
Snrnp48Q9D361 Fam136a-201ENSMUST00000071492 1643 ntAPPRIS P1 TSL 1 (best) BASIC25.37■■□□□ 1.65
Snrnp48Q9D361 Sh3glb2-203ENSMUST00000113620 1694 ntTSL 1 (best) BASIC25.36■■□□□ 1.65
Snrnp48Q9D361 Bok-205ENSMUST00000201863 883 ntAPPRIS P1 TSL 5 BASIC25.36■■□□□ 1.65
Snrnp48Q9D361 Gm5814-201ENSMUST00000177586 378 ntAPPRIS P1 BASIC25.33■■□□□ 1.65
Snrnp48Q9D361 Phlda1-201ENSMUST00000164773 1949 ntAPPRIS P1 TSL 1 (best) BASIC25.31■■□□□ 1.64
Snrnp48Q9D361 Gm7334-201ENSMUST00000061681 1356 ntAPPRIS P1 BASIC25.31■■□□□ 1.64
Snrnp48Q9D361 Noxo1-201ENSMUST00000019464 2238 ntAPPRIS P1 TSL 1 (best) BASIC25.3■■□□□ 1.64
Snrnp48Q9D361 Eif4e2-203ENSMUST00000113230 1569 ntTSL 1 (best) BASIC25.28■■□□□ 1.64
Snrnp48Q9D361 Gm30346-201ENSMUST00000218641 1699 ntBASIC25.27■■□□□ 1.64
Snrnp48Q9D361 Cebpb-201ENSMUST00000070642 1504 ntAPPRIS P1 BASIC25.27■■□□□ 1.64
Snrnp48Q9D361 Slc16a6-203ENSMUST00000070872 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC25.26■■□□□ 1.63
Snrnp48Q9D361 Ryk-203ENSMUST00000175883 2505 ntAPPRIS P3 TSL 1 (best) BASIC25.26■■□□□ 1.63
Snrnp48Q9D361 Akt1s1-202ENSMUST00000107880 1757 ntAPPRIS P3 TSL 1 (best) BASIC25.26■■□□□ 1.63
Snrnp48Q9D361 Srsf9-201ENSMUST00000031513 1162 ntAPPRIS P1 TSL 1 (best) BASIC25.23■■□□□ 1.63
Snrnp48Q9D361 Hmx1-201ENSMUST00000087674 1526 ntAPPRIS P1 TSL 1 (best) BASIC25.22■■□□□ 1.63
Snrnp48Q9D361 Cds2-203ENSMUST00000110158 1247 ntTSL 1 (best) BASIC25.22■■□□□ 1.63
Snrnp48Q9D361 Ebag9-203ENSMUST00000227691 1945 ntAPPRIS P1 BASIC25.2■■□□□ 1.62
Snrnp48Q9D361 1700028N14Rik-201ENSMUST00000139621 747 ntTSL 1 (best) BASIC25.2■■□□□ 1.62
Snrnp48Q9D361 Gm266-201ENSMUST00000010673 1215 ntAPPRIS P1 BASIC25.19■■□□□ 1.62
Snrnp48Q9D361 Gm42984-201ENSMUST00000195990 987 ntTSL 1 (best) BASIC25.19■■□□□ 1.62
Snrnp48Q9D361 Hoxa13-203ENSMUST00000147595 2395 ntAPPRIS P5 TSL 5 BASIC25.18■■□□□ 1.62
Snrnp48Q9D361 Gjc1-201ENSMUST00000068933 1903 ntAPPRIS P1 TSL 1 (best) BASIC25.18■■□□□ 1.62
Snrnp48Q9D361 Gm6345-201ENSMUST00000180378 1691 ntBASIC25.18■■□□□ 1.62
Snrnp48Q9D361 Galnt10-202ENSMUST00000108846 1745 ntTSL 1 (best) BASIC25.15■■□□□ 1.62
Snrnp48Q9D361 6530409C15Rik-202ENSMUST00000143551 1573 ntTSL 1 (best) BASIC25.15■■□□□ 1.62
Snrnp48Q9D361 Sowahd-201ENSMUST00000060057 1574 ntAPPRIS P1 BASIC25.14■■□□□ 1.62
Snrnp48Q9D361 Pth1r-202ENSMUST00000166716 2219 ntAPPRIS P1 TSL 1 (best) BASIC25.13■■□□□ 1.61
Snrnp48Q9D361 Fam60a-203ENSMUST00000111562 906 ntAPPRIS P1 TSL 3 BASIC25.12■■□□□ 1.61
Snrnp48Q9D361 Runx3-202ENSMUST00000119564 1855 ntAPPRIS ALT2 TSL 1 (best) BASIC25.11■■□□□ 1.61
Snrnp48Q9D361 A530058N18Rik-207ENSMUST00000152254 1211 ntTSL 1 (best) BASIC25.1■■□□□ 1.61
Snrnp48Q9D361 2210008F06Rik-201ENSMUST00000180805 1082 ntTSL 1 (best) BASIC25.1■■□□□ 1.61
Snrnp48Q9D361 Ywhaq-202ENSMUST00000103002 2110 ntAPPRIS P1 TSL 1 (best) BASIC25.09■■□□□ 1.61
Snrnp48Q9D361 Susd4-202ENSMUST00000153348 1898 ntAPPRIS P1 TSL 5 BASIC25.09■■□□□ 1.61
Snrnp48Q9D361 Aard-201ENSMUST00000090025 1348 ntAPPRIS P1 TSL 1 (best) BASIC25.09■■□□□ 1.61
Snrnp48Q9D361 Mfsd5-201ENSMUST00000051341 1742 ntAPPRIS P1 TSL 1 (best) BASIC25.09■■□□□ 1.61
Snrnp48Q9D361 Tpst1-201ENSMUST00000040721 2050 ntAPPRIS P1 TSL 1 (best) BASIC25.08■■□□□ 1.61
Snrnp48Q9D361 Macrod2-205ENSMUST00000110063 845 ntTSL 5 BASIC25.08■■□□□ 1.61
Snrnp48Q9D361 Ccdc122-202ENSMUST00000095625 1195 ntAPPRIS ALT2 TSL 1 (best) BASIC25.08■■□□□ 1.61
Snrnp48Q9D361 Dmwd-201ENSMUST00000032570 2494 ntAPPRIS P2 TSL 1 (best) BASIC25.08■■□□□ 1.61
Snrnp48Q9D361 Rnd2-201ENSMUST00000001347 1394 ntAPPRIS P1 TSL 1 (best) BASIC25.07■■□□□ 1.6
Snrnp48Q9D361 CT030161.2-201ENSMUST00000218666 735 ntTSL 3 BASIC25.05■■□□□ 1.6
Snrnp48Q9D361 Pfdn2-202ENSMUST00000135941 1735 ntAPPRIS P1 TSL 1 (best) BASIC25.05■■□□□ 1.6
Snrnp48Q9D361 Mrps7-201ENSMUST00000058109 1962 ntAPPRIS P1 TSL 1 (best) BASIC25.05■■□□□ 1.6
Snrnp48Q9D361 Guf1-201ENSMUST00000031113 1769 ntTSL 1 (best) BASIC25.05■■□□□ 1.6
Snrnp48Q9D361 Dapk3-202ENSMUST00000178422 1730 ntAPPRIS P1 TSL 1 (best) BASIC25.04■■□□□ 1.6
Snrnp48Q9D361 Macrod1-201ENSMUST00000040261 1274 ntAPPRIS P1 TSL 1 (best) BASIC25.04■■□□□ 1.6
Snrnp48Q9D361 Ric1-206ENSMUST00000162184 2157 ntTSL 1 (best) BASIC25.04■■□□□ 1.6
Snrnp48Q9D361 Upp2-202ENSMUST00000071543 2150 ntTSL 1 (best) BASIC25.04■■□□□ 1.6
Snrnp48Q9D361 Dazap1-203ENSMUST00000105362 2081 ntAPPRIS P3 TSL 1 (best) BASIC25.03■■□□□ 1.6
Snrnp48Q9D361 Znrf3-202ENSMUST00000143746 1022 ntTSL 1 (best) BASIC25.03■■□□□ 1.6
Snrnp48Q9D361 Tcte2-204ENSMUST00000130033 1462 ntAPPRIS ALT2 TSL 1 (best) BASIC25.02■■□□□ 1.6
Snrnp48Q9D361 Hoxa13-201ENSMUST00000047993 1309 ntAPPRIS ALT2 TSL 5 BASIC25.02■■□□□ 1.6
Snrnp48Q9D361 Tmeff1-202ENSMUST00000123476 1224 ntAPPRIS P1 TSL 1 (best) BASIC25.01■■□□□ 1.59
Snrnp48Q9D361 Traf4-201ENSMUST00000017530 2078 ntAPPRIS P1 TSL 1 (best) BASIC25.01■■□□□ 1.59
Snrnp48Q9D361 Rab40c-201ENSMUST00000026826 2466 ntAPPRIS P1 TSL 1 (best) BASIC25■■□□□ 1.59
Snrnp48Q9D361 Pitpna-205ENSMUST00000179445 1665 ntAPPRIS ALT1 TSL 5 BASIC25■■□□□ 1.59
Snrnp48Q9D361 Eif2ak3-204ENSMUST00000162950 927 ntTSL 1 (best) BASIC24.99■■□□□ 1.59
Snrnp48Q9D361 Pdia5-201ENSMUST00000023550 1808 ntAPPRIS P1 TSL 1 (best) BASIC24.99■■□□□ 1.59
Snrnp48Q9D361 Raly-201ENSMUST00000029120 1802 ntAPPRIS ALT2 TSL 5 BASIC24.99■■□□□ 1.59
Snrnp48Q9D361 Fam69b-201ENSMUST00000074240 1622 ntAPPRIS P1 TSL 1 (best) BASIC24.97■■□□□ 1.59
Snrnp48Q9D361 Ppp1r3e-202ENSMUST00000177403 1957 ntAPPRIS P1 TSL 5 BASIC24.95■■□□□ 1.58
Snrnp48Q9D361 Zfp131-205ENSMUST00000223812 663 ntBASIC24.95■■□□□ 1.58
Snrnp48Q9D361 Gm10762-201ENSMUST00000099385 1133 ntAPPRIS P1 BASIC24.95■■□□□ 1.58
Snrnp48Q9D361 Pradc1-202ENSMUST00000113770 610 ntTSL 1 (best) BASIC24.94■■□□□ 1.58
Snrnp48Q9D361 Egr3-201ENSMUST00000035908 1509 ntAPPRIS ALT1 TSL 1 (best) BASIC24.93■■□□□ 1.58
Snrnp48Q9D361 Ssbp3-202ENSMUST00000072753 1924 ntTSL 1 (best) BASIC24.92■■□□□ 1.58
Snrnp48Q9D361 Zxda-201ENSMUST00000117281 2621 ntBASIC24.92■■□□□ 1.58
Snrnp48Q9D361 Smarcc1-203ENSMUST00000197480 1949 ntTSL 1 (best) BASIC24.91■■□□□ 1.58
Snrnp48Q9D361 Rnf220-212ENSMUST00000221654 1949 ntTSL 1 (best) BASIC24.91■■□□□ 1.58
Snrnp48Q9D361 Rheb-201ENSMUST00000030787 1784 ntAPPRIS P1 TSL 1 (best) BASIC24.89■■□□□ 1.57
Snrnp48Q9D361 Triobp-206ENSMUST00000130663 1660 ntAPPRIS ALT2 TSL 5 BASIC24.88■■□□□ 1.57
Snrnp48Q9D361 Tbx1-201ENSMUST00000009241 1777 ntAPPRIS P1 TSL 1 (best) BASIC24.88■■□□□ 1.57
Snrnp48Q9D361 Hrh3-208ENSMUST00000171736 906 ntTSL 5 BASIC24.88■■□□□ 1.57
Snrnp48Q9D361 Gm527-201ENSMUST00000058135 1468 ntAPPRIS P1 TSL 1 (best) BASIC24.88■■□□□ 1.57
Snrnp48Q9D361 Crem-227ENSMUST00000149803 1422 ntTSL 1 (best) BASIC24.87■■□□□ 1.57
Snrnp48Q9D361 Hexdc-202ENSMUST00000106117 2149 ntAPPRIS P2 TSL 1 (best) BASIC24.87■■□□□ 1.57
Snrnp48Q9D361 Ttc19-202ENSMUST00000101075 2193 ntAPPRIS ALT2 TSL 1 (best) BASIC24.87■■□□□ 1.57
Snrnp48Q9D361 Fbxo6-201ENSMUST00000030858 1346 ntAPPRIS P1 TSL 1 (best) BASIC24.86■■□□□ 1.57
Snrnp48Q9D361 Kmt5a-202ENSMUST00000100709 1425 ntTSL 1 (best) BASIC24.86■■□□□ 1.57
Snrnp48Q9D361 Tbcel-204ENSMUST00000128959 1535 ntAPPRIS P1 TSL 5 BASIC24.86■■□□□ 1.57
Snrnp48Q9D361 Snx3-201ENSMUST00000019939 1401 ntAPPRIS P1 TSL 1 (best) BASIC24.86■■□□□ 1.57
Snrnp48Q9D361 Efemp2-201ENSMUST00000070118 1781 ntTSL 1 (best) BASIC24.85■■□□□ 1.57
Snrnp48Q9D361 Popdc3-201ENSMUST00000019994 1853 ntAPPRIS P1 TSL 1 (best) BASIC24.84■■□□□ 1.57
Snrnp48Q9D361 1700016A09Rik-201ENSMUST00000192004 835 ntBASIC24.83■■□□□ 1.57
Snrnp48Q9D361 Pard6a-205ENSMUST00000212430 1261 ntAPPRIS ALT1 TSL 1 (best) BASIC24.83■■□□□ 1.57
Snrnp48Q9D361 Gm15672-201ENSMUST00000151512 1354 ntTSL 1 (best) BASIC24.82■■□□□ 1.56
Snrnp48Q9D361 Adap1-201ENSMUST00000110865 2557 ntAPPRIS P1 TSL 5 BASIC24.82■■□□□ 1.56
Snrnp48Q9D361 Junos-204ENSMUST00000128094 830 ntTSL 1 (best) BASIC24.82■■□□□ 1.56
Retrieved 100 of 76,532 protein–RNA pairs in 61.7 ms