Protein–RNA interactions for Protein: Q9CQQ8

Lsm7, U6 snRNA-associated Sm-like protein LSm7, mousemouse

Known RBP Predictions only

Length 103 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lsm7Q9CQQ8 Gm9397-201ENSMUST00000200125 605 ntBASIC25.86■■□□□ 1.73
Lsm7Q9CQQ8 Fbll1-201ENSMUST00000160726 1503 ntAPPRIS P1 BASIC25.86■■□□□ 1.73
Lsm7Q9CQQ8 Raly-202ENSMUST00000058089 1747 ntAPPRIS P3 TSL 1 (best) BASIC25.85■■□□□ 1.73
Lsm7Q9CQQ8 6530409C15Rik-202ENSMUST00000143551 1573 ntTSL 1 (best) BASIC25.85■■□□□ 1.73
Lsm7Q9CQQ8 Dennd1b-209ENSMUST00000200533 1853 ntTSL 1 (best) BASIC25.85■■□□□ 1.73
Lsm7Q9CQQ8 Tlx1-201ENSMUST00000026236 2065 ntAPPRIS P1 TSL 1 (best) BASIC25.84■■□□□ 1.73
Lsm7Q9CQQ8 BC037032-205ENSMUST00000187080 508 ntTSL 5 BASIC25.84■■□□□ 1.73
Lsm7Q9CQQ8 Gm6658-202ENSMUST00000209493 1885 ntBASIC25.83■■□□□ 1.73
Lsm7Q9CQQ8 Gm527-203ENSMUST00000220993 1090 ntTSL 5 BASIC25.83■■□□□ 1.73
Lsm7Q9CQQ8 Plpp2-201ENSMUST00000063879 1654 ntAPPRIS P3 TSL 1 (best) BASIC25.83■■□□□ 1.73
Lsm7Q9CQQ8 Cdk2ap1-201ENSMUST00000031341 1315 ntAPPRIS P2 TSL 1 (best) BASIC25.83■■□□□ 1.73
Lsm7Q9CQQ8 Znrf3-202ENSMUST00000143746 1022 ntTSL 1 (best) BASIC25.82■■□□□ 1.72
Lsm7Q9CQQ8 Tspan3-201ENSMUST00000034876 1716 ntAPPRIS P1 TSL 1 (best) BASIC25.82■■□□□ 1.72
Lsm7Q9CQQ8 Dtnbp1-201ENSMUST00000072329 1362 ntAPPRIS P2 TSL 1 (best) BASIC25.82■■□□□ 1.72
Lsm7Q9CQQ8 March2-205ENSMUST00000173015 1418 ntTSL 3 BASIC25.81■■□□□ 1.72
Lsm7Q9CQQ8 Nrtn-201ENSMUST00000044752 1023 ntAPPRIS P1 TSL 1 (best) BASIC25.81■■□□□ 1.72
Lsm7Q9CQQ8 Gm7334-201ENSMUST00000061681 1356 ntAPPRIS P1 BASIC25.81■■□□□ 1.72
Lsm7Q9CQQ8 Hrh3-208ENSMUST00000171736 906 ntTSL 5 BASIC25.8■■□□□ 1.72
Lsm7Q9CQQ8 Fam136a-201ENSMUST00000071492 1643 ntAPPRIS P1 TSL 1 (best) BASIC25.8■■□□□ 1.72
Lsm7Q9CQQ8 Qrich1-209ENSMUST00000194385 975 ntTSL 2 BASIC25.79■■□□□ 1.72
Lsm7Q9CQQ8 Reep6-203ENSMUST00000105355 2127 ntAPPRIS ALT2 TSL 1 (best) BASIC25.79■■□□□ 1.72
Lsm7Q9CQQ8 Reep6-204ENSMUST00000105357 2127 ntTSL 1 (best) BASIC25.79■■□□□ 1.72
Lsm7Q9CQQ8 Raly-204ENSMUST00000116389 1759 ntAPPRIS ALT2 TSL 5 BASIC25.77■■□□□ 1.72
Lsm7Q9CQQ8 Lsm4-204ENSMUST00000210071 575 ntTSL 5 BASIC25.77■■□□□ 1.72
Lsm7Q9CQQ8 Pradc1-201ENSMUST00000032080 1038 ntAPPRIS P1 TSL 1 (best) BASIC25.77■■□□□ 1.72
Lsm7Q9CQQ8 Gm527-201ENSMUST00000058135 1468 ntAPPRIS P1 TSL 1 (best) BASIC25.76■■□□□ 1.71
Lsm7Q9CQQ8 Brsk2-203ENSMUST00000078200 2363 ntAPPRIS P4 TSL 1 (best) BASIC25.75■■□□□ 1.71
Lsm7Q9CQQ8 Rhobtb3-202ENSMUST00000109606 1676 ntTSL 1 (best) BASIC25.75■■□□□ 1.71
Lsm7Q9CQQ8 Phlda1-201ENSMUST00000164773 1949 ntAPPRIS P1 TSL 1 (best) BASIC25.75■■□□□ 1.71
Lsm7Q9CQQ8 Tnfsfm13-201ENSMUST00000108649 1049 ntAPPRIS ALT2 TSL 5 BASIC25.74■■□□□ 1.71
Lsm7Q9CQQ8 Mthfd2l-203ENSMUST00000202781 688 ntTSL 1 (best) BASIC25.74■■□□□ 1.71
Lsm7Q9CQQ8 Junos-204ENSMUST00000128094 830 ntTSL 1 (best) BASIC25.72■■□□□ 1.71
Lsm7Q9CQQ8 Macrod1-201ENSMUST00000040261 1274 ntAPPRIS P1 TSL 1 (best) BASIC25.71■■□□□ 1.71
Lsm7Q9CQQ8 Rundc3a-201ENSMUST00000006750 2046 ntAPPRIS P2 TSL 1 (best) BASIC25.71■■□□□ 1.71
Lsm7Q9CQQ8 1810026B05Rik-206ENSMUST00000187421 519 ntTSL 3 BASIC25.7■■□□□ 1.7
Lsm7Q9CQQ8 Ccm2-201ENSMUST00000000388 1858 ntAPPRIS P1 TSL 1 (best) BASIC25.7■■□□□ 1.7
Lsm7Q9CQQ8 Gm26859-201ENSMUST00000181743 1852 ntTSL 5 BASIC25.69■■□□□ 1.7
Lsm7Q9CQQ8 Tcte2-204ENSMUST00000130033 1462 ntAPPRIS ALT2 TSL 1 (best) BASIC25.67■■□□□ 1.7
Lsm7Q9CQQ8 Akt1s1-202ENSMUST00000107880 1757 ntAPPRIS P3 TSL 1 (best) BASIC25.66■■□□□ 1.7
Lsm7Q9CQQ8 Crip2-201ENSMUST00000084882 1439 ntAPPRIS P1 TSL 1 (best) BASIC25.65■■□□□ 1.7
Lsm7Q9CQQ8 1810026B05Rik-202ENSMUST00000184554 782 ntTSL 3 BASIC25.65■■□□□ 1.7
Lsm7Q9CQQ8 Tpm1-216ENSMUST00000113707 1898 ntTSL 1 (best) BASIC25.64■■□□□ 1.7
Lsm7Q9CQQ8 Gm24970-201ENSMUST00000175582 82 ntBASIC25.64■■□□□ 1.7
Lsm7Q9CQQ8 AC150314.2-201ENSMUST00000214135 834 ntTSL 5 BASIC25.64■■□□□ 1.7
Lsm7Q9CQQ8 Mxra7-202ENSMUST00000047715 757 ntAPPRIS ALT2 TSL 1 (best) BASIC25.64■■□□□ 1.7
Lsm7Q9CQQ8 C2cd4d-201ENSMUST00000169433 1321 ntAPPRIS P1 TSL 3 BASIC25.63■■□□□ 1.69
Lsm7Q9CQQ8 Tmem243-201ENSMUST00000115365 1040 ntAPPRIS P1 TSL 2 BASIC25.63■■□□□ 1.69
Lsm7Q9CQQ8 Smarcc2-205ENSMUST00000218228 603 ntTSL 5 BASIC25.63■■□□□ 1.69
Lsm7Q9CQQ8 Stard3nl-210ENSMUST00000222869 1030 ntTSL 5 BASIC25.63■■□□□ 1.69
Lsm7Q9CQQ8 C1qtnf5-201ENSMUST00000114815 1215 ntAPPRIS P1 TSL 1 (best) BASIC25.62■■□□□ 1.69
Lsm7Q9CQQ8 Iffo2-203ENSMUST00000174078 5716 ntAPPRIS ALT2 TSL 1 (best) BASIC25.62■■□□□ 1.69
Lsm7Q9CQQ8 Hmx1-201ENSMUST00000087674 1526 ntAPPRIS P1 TSL 1 (best) BASIC25.6■■□□□ 1.69
Lsm7Q9CQQ8 Gnas-207ENSMUST00000109085 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC25.59■■□□□ 1.69
Lsm7Q9CQQ8 Dut-202ENSMUST00000082122 1020 ntTSL 1 (best) BASIC25.57■■□□□ 1.68
Lsm7Q9CQQ8 Srp9-201ENSMUST00000027792 1367 ntAPPRIS P1 TSL 1 (best) BASIC25.56■■□□□ 1.68
Lsm7Q9CQQ8 Gng13-201ENSMUST00000115108 347 ntAPPRIS P1 TSL 1 (best) BASIC25.55■■□□□ 1.68
Lsm7Q9CQQ8 Pfn2-202ENSMUST00000119344 1879 ntTSL 1 (best) BASIC25.55■■□□□ 1.68
Lsm7Q9CQQ8 Pitpna-205ENSMUST00000179445 1665 ntAPPRIS ALT1 TSL 5 BASIC25.55■■□□□ 1.68
Lsm7Q9CQQ8 Crem-227ENSMUST00000149803 1422 ntTSL 1 (best) BASIC25.54■■□□□ 1.68
Lsm7Q9CQQ8 Gm20503-201ENSMUST00000174664 1294 ntAPPRIS P1 TSL 5 BASIC25.54■■□□□ 1.68
Lsm7Q9CQQ8 Lactb-201ENSMUST00000034929 2031 ntAPPRIS P1 TSL 1 (best) BASIC25.54■■□□□ 1.68
Lsm7Q9CQQ8 Fcnaos-201ENSMUST00000127642 1351 ntTSL 1 (best) BASIC25.54■■□□□ 1.68
Lsm7Q9CQQ8 4932443I19Rik-201ENSMUST00000166277 799 ntAPPRIS P2 TSL 1 (best) BASIC25.53■■□□□ 1.68
Lsm7Q9CQQ8 Rab7-204ENSMUST00000113598 2031 ntAPPRIS P1 TSL 1 (best) BASIC25.53■■□□□ 1.68
Lsm7Q9CQQ8 Egr3-201ENSMUST00000035908 1509 ntAPPRIS ALT1 TSL 1 (best) BASIC25.53■■□□□ 1.68
Lsm7Q9CQQ8 Phf10-201ENSMUST00000024657 1663 ntAPPRIS P1 TSL 1 (best) BASIC25.52■■□□□ 1.68
Lsm7Q9CQQ8 Gm15672-201ENSMUST00000151512 1354 ntTSL 1 (best) BASIC25.52■■□□□ 1.68
Lsm7Q9CQQ8 Twist1-201ENSMUST00000049089 1628 ntAPPRIS P1 TSL 1 (best) BASIC25.52■■□□□ 1.68
Lsm7Q9CQQ8 Gm30346-201ENSMUST00000218641 1699 ntBASIC25.51■■□□□ 1.67
Lsm7Q9CQQ8 Ywhaq-202ENSMUST00000103002 2110 ntAPPRIS P1 TSL 1 (best) BASIC25.51■■□□□ 1.67
Lsm7Q9CQQ8 Gm43863-201ENSMUST00000203822 1192 ntBASIC25.5■■□□□ 1.67
Lsm7Q9CQQ8 Eif4e2-203ENSMUST00000113230 1569 ntTSL 1 (best) BASIC25.47■■□□□ 1.67
Lsm7Q9CQQ8 Pradc1-202ENSMUST00000113770 610 ntTSL 1 (best) BASIC25.46■■□□□ 1.67
Lsm7Q9CQQ8 Ppp1r14b-201ENSMUST00000070850 919 ntAPPRIS P1 TSL 1 (best) BASIC25.46■■□□□ 1.67
Lsm7Q9CQQ8 Kmt5a-202ENSMUST00000100709 1425 ntTSL 1 (best) BASIC25.44■■□□□ 1.66
Lsm7Q9CQQ8 A430072P03Rik-201ENSMUST00000161480 1510 ntTSL 1 (best) BASIC25.43■■□□□ 1.66
Lsm7Q9CQQ8 Dlx6os2-201ENSMUST00000178206 1354 ntBASIC25.43■■□□□ 1.66
Lsm7Q9CQQ8 Spg7-201ENSMUST00000108868 845 ntTSL 2 BASIC25.42■■□□□ 1.66
Lsm7Q9CQQ8 A330023F24Rik-201ENSMUST00000181226 955 ntTSL 1 (best) BASIC25.41■■□□□ 1.66
Lsm7Q9CQQ8 Triobp-206ENSMUST00000130663 1660 ntAPPRIS ALT2 TSL 5 BASIC25.41■■□□□ 1.66
Lsm7Q9CQQ8 Cebpb-201ENSMUST00000070642 1504 ntAPPRIS P1 BASIC25.41■■□□□ 1.66
Lsm7Q9CQQ8 Dyrk1a-202ENSMUST00000119878 5759 ntAPPRIS P1 TSL 5 BASIC25.4■■□□□ 1.66
Lsm7Q9CQQ8 2810459M11Rik-201ENSMUST00000027429 1225 ntAPPRIS ALT2 TSL 1 (best) BASIC25.4■■□□□ 1.66
Lsm7Q9CQQ8 Ring1-201ENSMUST00000025183 2034 ntAPPRIS P1 TSL 1 (best) BASIC25.39■■□□□ 1.66
Lsm7Q9CQQ8 Fam117a-201ENSMUST00000037502 2317 ntAPPRIS P1 TSL 1 (best) BASIC25.38■■□□□ 1.65
Lsm7Q9CQQ8 Tbcel-204ENSMUST00000128959 1535 ntAPPRIS P1 TSL 5 BASIC25.38■■□□□ 1.65
Lsm7Q9CQQ8 A530058N18Rik-204ENSMUST00000141209 709 ntTSL 5 BASIC25.38■■□□□ 1.65
Lsm7Q9CQQ8 Il3ra-201ENSMUST00000090591 1614 ntAPPRIS P2 TSL 1 (best) BASIC25.37■■□□□ 1.65
Lsm7Q9CQQ8 2310050C09Rik-201ENSMUST00000163439 1078 ntAPPRIS P1 TSL 2 BASIC25.37■■□□□ 1.65
Lsm7Q9CQQ8 Nelfe-204ENSMUST00000173357 1399 ntAPPRIS P1 TSL 1 (best) BASIC25.36■■□□□ 1.65
Lsm7Q9CQQ8 AC157572.2-201ENSMUST00000226970 908 ntBASIC25.36■■□□□ 1.65
Lsm7Q9CQQ8 A530058N18Rik-208ENSMUST00000131299 1387 ntTSL 2 BASIC25.34■■□□□ 1.65
Lsm7Q9CQQ8 Tsen34-203ENSMUST00000108629 1238 ntTSL 1 (best) BASIC25.34■■□□□ 1.65
Lsm7Q9CQQ8 Snx3-201ENSMUST00000019939 1401 ntAPPRIS P1 TSL 1 (best) BASIC25.34■■□□□ 1.65
Lsm7Q9CQQ8 Mrps7-201ENSMUST00000058109 1962 ntAPPRIS P1 TSL 1 (best) BASIC25.31■■□□□ 1.64
Lsm7Q9CQQ8 5730480H06Rik-201ENSMUST00000030968 1616 ntAPPRIS P1 TSL 1 (best) BASIC25.3■■□□□ 1.64
Lsm7Q9CQQ8 Cdv3-205ENSMUST00000189896 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC25.29■■□□□ 1.64
Lsm7Q9CQQ8 Eid2-201ENSMUST00000059596 1392 ntAPPRIS P1 BASIC25.29■■□□□ 1.64
Lsm7Q9CQQ8 Dazap1-202ENSMUST00000105361 1537 ntAPPRIS ALT1 TSL 1 (best) BASIC25.28■■□□□ 1.64
Lsm7Q9CQQ8 Hoxd8-201ENSMUST00000019749 2634 ntAPPRIS P3 TSL 1 (best) BASIC25.28■■□□□ 1.64
Retrieved 100 of 76,532 protein–RNA pairs in 14.7 ms