Protein–RNA interactions for Protein: Q99LC2

Cstf1, Cleavage stimulation factor subunit 1, mousemouse

Known RBP Predictions only

Length 431 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cstf1Q99LC2 Gm26588-201ENSMUST00000181064 2098 ntTSL 1 (best) BASIC25.76■■□□□ 1.71
Cstf1Q99LC2 Dtnbp1-202ENSMUST00000110128 1305 ntAPPRIS ALT2 TSL 5 BASIC25.72■■□□□ 1.71
Cstf1Q99LC2 Sowahd-201ENSMUST00000060057 1574 ntAPPRIS P1 BASIC25.71■■□□□ 1.71
Cstf1Q99LC2 Tceal5-201ENSMUST00000066819 1044 ntAPPRIS P1 TSL 1 (best) BASIC25.71■■□□□ 1.71
Cstf1Q99LC2 Tnfsf12-202ENSMUST00000181810 1435 ntAPPRIS P1 TSL 1 (best) BASIC25.69■■□□□ 1.7
Cstf1Q99LC2 Tcfl5-201ENSMUST00000037877 2225 ntAPPRIS P1 TSL 1 (best) BASIC25.67■■□□□ 1.7
Cstf1Q99LC2 Twist1-201ENSMUST00000049089 1628 ntAPPRIS P1 TSL 1 (best) BASIC25.66■■□□□ 1.7
Cstf1Q99LC2 Ubl4a-207ENSMUST00000178691 1038 ntAPPRIS P1 TSL 2 BASIC25.65■■□□□ 1.7
Cstf1Q99LC2 Rnf215-201ENSMUST00000003677 1874 ntAPPRIS P1 TSL 1 (best) BASIC25.64■■□□□ 1.7
Cstf1Q99LC2 Ccm2l-201ENSMUST00000109800 2158 ntAPPRIS P1 TSL 5 BASIC25.64■■□□□ 1.7
Cstf1Q99LC2 Gm43863-201ENSMUST00000203822 1192 ntBASIC25.64■■□□□ 1.7
Cstf1Q99LC2 Lmo2-201ENSMUST00000111139 1434 ntTSL 5 BASIC25.63■■□□□ 1.69
Cstf1Q99LC2 Bok-201ENSMUST00000027499 1468 ntAPPRIS P1 TSL 1 (best) BASIC25.63■■□□□ 1.69
Cstf1Q99LC2 Six3-202ENSMUST00000175898 2419 ntAPPRIS P2 TSL 1 (best) BASIC25.62■■□□□ 1.69
Cstf1Q99LC2 Znrf3-202ENSMUST00000143746 1022 ntTSL 1 (best) BASIC25.6■■□□□ 1.69
Cstf1Q99LC2 Tcte3-201ENSMUST00000040746 788 ntAPPRIS P1 TSL 1 (best) BASIC25.6■■□□□ 1.69
Cstf1Q99LC2 Tcte3-202ENSMUST00000097398 632 ntTSL 1 (best) BASIC25.6■■□□□ 1.69
Cstf1Q99LC2 6530409C15Rik-202ENSMUST00000143551 1573 ntTSL 1 (best) BASIC25.6■■□□□ 1.69
Cstf1Q99LC2 Uba52-205ENSMUST00000129909 705 ntAPPRIS P1 TSL 2 BASIC25.58■■□□□ 1.69
Cstf1Q99LC2 Cdv3-205ENSMUST00000189896 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC25.56■■□□□ 1.68
Cstf1Q99LC2 Kras-207ENSMUST00000203147 817 ntTSL 5 BASIC25.55■■□□□ 1.68
Cstf1Q99LC2 Lactb-202ENSMUST00000215172 1806 ntTSL 1 (best) BASIC25.55■■□□□ 1.68
Cstf1Q99LC2 Ldb1-208ENSMUST00000185355 2088 ntTSL 1 (best) BASIC25.54■■□□□ 1.68
Cstf1Q99LC2 Tada2b-202ENSMUST00000119916 1321 ntTSL 5 BASIC25.52■■□□□ 1.68
Cstf1Q99LC2 Emx1-201ENSMUST00000045942 1561 ntAPPRIS P1 TSL 1 (best) BASIC25.52■■□□□ 1.68
Cstf1Q99LC2 Epcam-201ENSMUST00000053577 2040 ntAPPRIS P1 TSL 5 BASIC25.51■■□□□ 1.67
Cstf1Q99LC2 Cadm4-201ENSMUST00000068023 2161 ntAPPRIS P1 TSL 1 (best) BASIC25.51■■□□□ 1.67
Cstf1Q99LC2 Guk1-204ENSMUST00000170202 1078 ntAPPRIS P1 TSL 1 (best) BASIC25.5■■□□□ 1.67
Cstf1Q99LC2 Bok-205ENSMUST00000201863 883 ntAPPRIS P1 TSL 5 BASIC25.5■■□□□ 1.67
Cstf1Q99LC2 Atp1b3-201ENSMUST00000034983 1994 ntAPPRIS P1 TSL 1 (best) BASIC25.5■■□□□ 1.67
Cstf1Q99LC2 2310050C09Rik-201ENSMUST00000163439 1078 ntAPPRIS P1 TSL 2 BASIC25.49■■□□□ 1.67
Cstf1Q99LC2 Srp9-201ENSMUST00000027792 1367 ntAPPRIS P1 TSL 1 (best) BASIC25.48■■□□□ 1.67
Cstf1Q99LC2 Stard3nl-201ENSMUST00000039694 1327 ntAPPRIS P1 TSL 1 (best) BASIC25.48■■□□□ 1.67
Cstf1Q99LC2 A530058N18Rik-204ENSMUST00000141209 709 ntTSL 5 BASIC25.48■■□□□ 1.67
Cstf1Q99LC2 Gm31266-201ENSMUST00000192060 656 ntTSL 5 BASIC25.48■■□□□ 1.67
Cstf1Q99LC2 Gkap1-201ENSMUST00000091579 1523 ntAPPRIS P1 TSL 1 (best) BASIC25.47■■□□□ 1.67
Cstf1Q99LC2 Hspb1-202ENSMUST00000111155 930 ntTSL 1 (best) BASIC25.42■■□□□ 1.66
Cstf1Q99LC2 Tbcel-204ENSMUST00000128959 1535 ntAPPRIS P1 TSL 5 BASIC25.42■■□□□ 1.66
Cstf1Q99LC2 Ssbp3-203ENSMUST00000097934 1742 ntAPPRIS ALT2 TSL 5 BASIC25.41■■□□□ 1.66
Cstf1Q99LC2 Gm11529-201ENSMUST00000153012 639 ntTSL 1 (best) BASIC25.41■■□□□ 1.66
Cstf1Q99LC2 Gm42809-201ENSMUST00000198429 1138 ntBASIC25.4■■□□□ 1.66
Cstf1Q99LC2 AC157572.2-201ENSMUST00000226970 908 ntBASIC25.4■■□□□ 1.66
Cstf1Q99LC2 Egln2-201ENSMUST00000080058 2107 ntAPPRIS P1 TSL 1 (best) BASIC25.39■■□□□ 1.66
Cstf1Q99LC2 Gnai2-201ENSMUST00000055704 2215 ntAPPRIS P1 TSL 1 (best) BASIC25.39■■□□□ 1.66
Cstf1Q99LC2 1700084E18Rik-202ENSMUST00000205624 729 ntBASIC25.38■■□□□ 1.65
Cstf1Q99LC2 Tnfsfm13-202ENSMUST00000174159 1470 ntAPPRIS ALT2 TSL 2 BASIC25.38■■□□□ 1.65
Cstf1Q99LC2 Sept11-208ENSMUST00000202308 1792 ntAPPRIS ALT1 TSL 5 BASIC25.36■■□□□ 1.65
Cstf1Q99LC2 Gskip-202ENSMUST00000222284 1064 ntTSL 1 (best) BASIC25.36■■□□□ 1.65
Cstf1Q99LC2 Hnrnpd-202ENSMUST00000072750 1537 ntAPPRIS ALT2 TSL 3 BASIC25.36■■□□□ 1.65
Cstf1Q99LC2 Il3ra-201ENSMUST00000090591 1614 ntAPPRIS P2 TSL 1 (best) BASIC25.35■■□□□ 1.65
Cstf1Q99LC2 Gfra4-203ENSMUST00000110234 600 ntTSL 1 (best) BASIC25.33■■□□□ 1.65
Cstf1Q99LC2 Gfra4-204ENSMUST00000110235 573 ntTSL 1 (best) BASIC25.33■■□□□ 1.65
Cstf1Q99LC2 Bckdhb-206ENSMUST00000190637 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC25.33■■□□□ 1.65
Cstf1Q99LC2 1700003F12Rik-202ENSMUST00000109709 704 ntAPPRIS ALT2 TSL 3 BASIC25.32■■□□□ 1.64
Cstf1Q99LC2 1700003F12Rik-201ENSMUST00000045116 704 ntAPPRIS P2 TSL 1 (best) BASIC25.32■■□□□ 1.64
Cstf1Q99LC2 Stard10-203ENSMUST00000164479 1375 ntAPPRIS P1 TSL 1 (best) BASIC25.31■■□□□ 1.64
Cstf1Q99LC2 Bod1-202ENSMUST00000109415 799 ntAPPRIS P1 TSL 2 BASIC25.31■■□□□ 1.64
Cstf1Q99LC2 Calm3-201ENSMUST00000019514 2290 ntAPPRIS P1 TSL 1 (best) BASIC25.31■■□□□ 1.64
Cstf1Q99LC2 Gm20402-201ENSMUST00000174738 687 ntTSL 3 BASIC25.3■■□□□ 1.64
Cstf1Q99LC2 Gm15672-201ENSMUST00000151512 1354 ntTSL 1 (best) BASIC25.3■■□□□ 1.64
Cstf1Q99LC2 Dleu2-206ENSMUST00000182537 318 ntTSL 2 BASIC25.29■■□□□ 1.64
Cstf1Q99LC2 Gm5814-201ENSMUST00000177586 378 ntAPPRIS P1 BASIC25.28■■□□□ 1.64
Cstf1Q99LC2 Ube2m-201ENSMUST00000005714 1472 ntAPPRIS P1 TSL 1 (best) BASIC25.28■■□□□ 1.64
Cstf1Q99LC2 Cops6-202ENSMUST00000110951 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC25.27■■□□□ 1.64
Cstf1Q99LC2 Tprgl-201ENSMUST00000030896 1724 ntAPPRIS P1 TSL 1 (best) BASIC25.26■■□□□ 1.63
Cstf1Q99LC2 Nkain2-201ENSMUST00000092602 558 ntBASIC25.25■■□□□ 1.63
Cstf1Q99LC2 Eid2-201ENSMUST00000059596 1392 ntAPPRIS P1 BASIC25.25■■□□□ 1.63
Cstf1Q99LC2 Dazap1-202ENSMUST00000105361 1537 ntAPPRIS ALT1 TSL 1 (best) BASIC25.25■■□□□ 1.63
Cstf1Q99LC2 Glrx2-205ENSMUST00000145571 758 ntTSL 2 BASIC25.24■■□□□ 1.63
Cstf1Q99LC2 Gm7432-201ENSMUST00000210343 879 ntBASIC25.24■■□□□ 1.63
Cstf1Q99LC2 Gm28592-201ENSMUST00000186844 741 ntTSL 5 BASIC25.23■■□□□ 1.63
Cstf1Q99LC2 Dnajb2-202ENSMUST00000082158 1253 ntAPPRIS P1 TSL 5 BASIC25.23■■□□□ 1.63
Cstf1Q99LC2 Tcte2-204ENSMUST00000130033 1462 ntAPPRIS ALT2 TSL 1 (best) BASIC25.22■■□□□ 1.63
Cstf1Q99LC2 Fndc10-201ENSMUST00000099265 2140 ntAPPRIS P1 BASIC25.21■■□□□ 1.63
Cstf1Q99LC2 Brsk2-203ENSMUST00000078200 2363 ntAPPRIS P4 TSL 1 (best) BASIC25.21■■□□□ 1.63
Cstf1Q99LC2 Phlda3-201ENSMUST00000038945 1435 ntAPPRIS P1 TSL 1 (best) BASIC25.2■■□□□ 1.62
Cstf1Q99LC2 Bckdhb-201ENSMUST00000034801 1472 ntAPPRIS P3 TSL 1 (best) BASIC25.19■■□□□ 1.62
Cstf1Q99LC2 Stk24-201ENSMUST00000079817 2676 ntAPPRIS P1 TSL 1 (best) BASIC25.19■■□□□ 1.62
Cstf1Q99LC2 Gm7334-201ENSMUST00000061681 1356 ntAPPRIS P1 BASIC25.18■■□□□ 1.62
Cstf1Q99LC2 Ppp4c-211ENSMUST00000206570 1400 ntAPPRIS P1 TSL 1 (best) BASIC25.18■■□□□ 1.62
Cstf1Q99LC2 Spata1-201ENSMUST00000029839 1920 ntAPPRIS P1 TSL 1 (best) BASIC25.17■■□□□ 1.62
Cstf1Q99LC2 Pcbd2-201ENSMUST00000021958 544 ntTSL 1 (best) BASIC25.16■■□□□ 1.62
Cstf1Q99LC2 Fam241a-202ENSMUST00000199273 2234 ntAPPRIS P1 TSL 1 (best) BASIC25.16■■□□□ 1.62
Cstf1Q99LC2 Gm26508-201ENSMUST00000181285 1516 ntTSL 5 BASIC25.15■■□□□ 1.62
Cstf1Q99LC2 Mocs3-201ENSMUST00000099071 1973 ntAPPRIS P1 BASIC25.14■■□□□ 1.62
Cstf1Q99LC2 Crem-227ENSMUST00000149803 1422 ntTSL 1 (best) BASIC25.14■■□□□ 1.62
Cstf1Q99LC2 Iscu-203ENSMUST00000112312 1116 ntTSL 5 BASIC25.13■■□□□ 1.61
Cstf1Q99LC2 Hmgn3-202ENSMUST00000162246 983 ntAPPRIS P4 TSL 1 (best) BASIC25.13■■□□□ 1.61
Cstf1Q99LC2 Snrpe-202ENSMUST00000164574 597 ntTSL 3 BASIC25.13■■□□□ 1.61
Cstf1Q99LC2 Egr3-201ENSMUST00000035908 1509 ntAPPRIS ALT1 TSL 1 (best) BASIC25.12■■□□□ 1.61
Cstf1Q99LC2 Phlda1-201ENSMUST00000164773 1949 ntAPPRIS P1 TSL 1 (best) BASIC25.12■■□□□ 1.61
Cstf1Q99LC2 Tmbim4-204ENSMUST00000134797 486 ntTSL 1 (best) BASIC25.11■■□□□ 1.61
Cstf1Q99LC2 Mapk3-202ENSMUST00000057669 1800 ntAPPRIS P2 TSL 1 (best) BASIC25.11■■□□□ 1.61
Cstf1Q99LC2 Pard6a-203ENSMUST00000211888 1179 ntTSL 1 (best) BASIC25.1■■□□□ 1.61
Cstf1Q99LC2 Rab43-202ENSMUST00000032135 1262 ntTSL 1 (best) BASIC25.1■■□□□ 1.61
Cstf1Q99LC2 4930577N17Rik-201ENSMUST00000139771 1625 ntBASIC25.1■■□□□ 1.61
Cstf1Q99LC2 Prelid3b-201ENSMUST00000016401 1553 ntAPPRIS P1 TSL 1 (best) BASIC25.09■■□□□ 1.61
Cstf1Q99LC2 Nelfe-204ENSMUST00000173357 1399 ntAPPRIS P1 TSL 1 (best) BASIC25.08■■□□□ 1.61
Cstf1Q99LC2 1110065P20Rik-201ENSMUST00000106190 968 ntAPPRIS P1 TSL 2 BASIC25.07■■□□□ 1.6
Cstf1Q99LC2 Smarcad1-211ENSMUST00000204696 734 ntTSL 1 (best) BASIC25.07■■□□□ 1.6
Retrieved 100 of 76,532 protein–RNA pairs in 42.4 ms