Protein–RNA interactions for Protein: Q91Y21

Pcdha1, Protocadherin alpha 1, mousemouse

Predictions only

Length 948 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdha1Q91Y21 Gm9397-201ENSMUST00000200125 605 ntBASIC26.64■■□□□ 1.86
Pcdha1Q91Y21 Tpm1-216ENSMUST00000113707 1898 ntTSL 1 (best) BASIC26.61■■□□□ 1.85
Pcdha1Q91Y21 Bok-201ENSMUST00000027499 1468 ntAPPRIS P1 TSL 1 (best) BASIC26.61■■□□□ 1.85
Pcdha1Q91Y21 Dtnbp1-201ENSMUST00000072329 1362 ntAPPRIS P2 TSL 1 (best) BASIC26.6■■□□□ 1.85
Pcdha1Q91Y21 Spata1-201ENSMUST00000029839 1920 ntAPPRIS P1 TSL 1 (best) BASIC26.6■■□□□ 1.85
Pcdha1Q91Y21 Cdk2ap1-201ENSMUST00000031341 1315 ntAPPRIS P2 TSL 1 (best) BASIC26.59■■□□□ 1.85
Pcdha1Q91Y21 Lmo2-201ENSMUST00000111139 1434 ntTSL 5 BASIC26.58■■□□□ 1.85
Pcdha1Q91Y21 Sept11-208ENSMUST00000202308 1792 ntAPPRIS ALT1 TSL 5 BASIC26.57■■□□□ 1.84
Pcdha1Q91Y21 Tnfsfm13-201ENSMUST00000108649 1049 ntAPPRIS ALT2 TSL 5 BASIC26.57■■□□□ 1.84
Pcdha1Q91Y21 1110008F13Rik-201ENSMUST00000029165 1045 ntAPPRIS P1 TSL 1 (best) BASIC26.57■■□□□ 1.84
Pcdha1Q91Y21 Capns1-201ENSMUST00000001845 1600 ntAPPRIS P2 TSL 5 BASIC26.57■■□□□ 1.84
Pcdha1Q91Y21 Pfn2-202ENSMUST00000119344 1879 ntTSL 1 (best) BASIC26.55■■□□□ 1.84
Pcdha1Q91Y21 Bok-205ENSMUST00000201863 883 ntAPPRIS P1 TSL 5 BASIC26.54■■□□□ 1.84
Pcdha1Q91Y21 March2-205ENSMUST00000173015 1418 ntTSL 3 BASIC26.54■■□□□ 1.84
Pcdha1Q91Y21 Ythdf1-202ENSMUST00000108876 2272 ntTSL 1 (best) BASIC26.53■■□□□ 1.84
Pcdha1Q91Y21 BC037032-205ENSMUST00000187080 508 ntTSL 5 BASIC26.53■■□□□ 1.84
Pcdha1Q91Y21 Raly-204ENSMUST00000116389 1759 ntAPPRIS ALT2 TSL 5 BASIC26.53■■□□□ 1.84
Pcdha1Q91Y21 Qrich1-209ENSMUST00000194385 975 ntTSL 2 BASIC26.52■■□□□ 1.84
Pcdha1Q91Y21 Smarcc2-205ENSMUST00000218228 603 ntTSL 5 BASIC26.52■■□□□ 1.84
Pcdha1Q91Y21 Ccz1-201ENSMUST00000031621 1769 ntAPPRIS P1 TSL 1 (best) BASIC26.52■■□□□ 1.84
Pcdha1Q91Y21 Tspan3-201ENSMUST00000034876 1716 ntAPPRIS P1 TSL 1 (best) BASIC26.52■■□□□ 1.84
Pcdha1Q91Y21 Sowahd-201ENSMUST00000060057 1574 ntAPPRIS P1 BASIC26.51■■□□□ 1.83
Pcdha1Q91Y21 Ube2m-201ENSMUST00000005714 1472 ntAPPRIS P1 TSL 1 (best) BASIC26.5■■□□□ 1.83
Pcdha1Q91Y21 AC150314.2-201ENSMUST00000214135 834 ntTSL 5 BASIC26.5■■□□□ 1.83
Pcdha1Q91Y21 Hnrnpd-202ENSMUST00000072750 1537 ntAPPRIS ALT2 TSL 3 BASIC26.49■■□□□ 1.83
Pcdha1Q91Y21 Rnd2-201ENSMUST00000001347 1394 ntAPPRIS P1 TSL 1 (best) BASIC26.48■■□□□ 1.83
Pcdha1Q91Y21 Mthfd2l-203ENSMUST00000202781 688 ntTSL 1 (best) BASIC26.48■■□□□ 1.83
Pcdha1Q91Y21 Tgfbr1-205ENSMUST00000126171 1829 ntTSL 5 BASIC26.47■■□□□ 1.83
Pcdha1Q91Y21 Fam117a-201ENSMUST00000037502 2317 ntAPPRIS P1 TSL 1 (best) BASIC26.47■■□□□ 1.83
Pcdha1Q91Y21 Lactb-201ENSMUST00000034929 2031 ntAPPRIS P1 TSL 1 (best) BASIC26.46■■□□□ 1.83
Pcdha1Q91Y21 Ap1ar-210ENSMUST00000200409 2580 ntTSL 5 BASIC26.45■■□□□ 1.82
Pcdha1Q91Y21 6530409C15Rik-202ENSMUST00000143551 1573 ntTSL 1 (best) BASIC26.45■■□□□ 1.82
Pcdha1Q91Y21 1810026B05Rik-202ENSMUST00000184554 782 ntTSL 3 BASIC26.44■■□□□ 1.82
Pcdha1Q91Y21 Crip2-201ENSMUST00000084882 1439 ntAPPRIS P1 TSL 1 (best) BASIC26.43■■□□□ 1.82
Pcdha1Q91Y21 4932443I19Rik-201ENSMUST00000166277 799 ntAPPRIS P2 TSL 1 (best) BASIC26.42■■□□□ 1.82
Pcdha1Q91Y21 Hrh3-208ENSMUST00000171736 906 ntTSL 5 BASIC26.42■■□□□ 1.82
Pcdha1Q91Y21 Cnot6l-203ENSMUST00000122003 2089 ntTSL 1 (best) BASIC26.42■■□□□ 1.82
Pcdha1Q91Y21 1810026B05Rik-206ENSMUST00000187421 519 ntTSL 3 BASIC26.41■■□□□ 1.82
Pcdha1Q91Y21 C2cd4d-201ENSMUST00000169433 1321 ntAPPRIS P1 TSL 3 BASIC26.4■■□□□ 1.82
Pcdha1Q91Y21 Cyp26a1-201ENSMUST00000025946 1773 ntAPPRIS P1 TSL 1 (best) BASIC26.4■■□□□ 1.82
Pcdha1Q91Y21 Raly-202ENSMUST00000058089 1747 ntAPPRIS P3 TSL 1 (best) BASIC26.39■■□□□ 1.81
Pcdha1Q91Y21 Junos-204ENSMUST00000128094 830 ntTSL 1 (best) BASIC26.38■■□□□ 1.81
Pcdha1Q91Y21 Gm20503-201ENSMUST00000174664 1294 ntAPPRIS P1 TSL 5 BASIC26.38■■□□□ 1.81
Pcdha1Q91Y21 Dut-202ENSMUST00000082122 1020 ntTSL 1 (best) BASIC26.38■■□□□ 1.81
Pcdha1Q91Y21 AC153504.1-201ENSMUST00000218379 2290 ntBASIC26.38■■□□□ 1.81
Pcdha1Q91Y21 Gm527-201ENSMUST00000058135 1468 ntAPPRIS P1 TSL 1 (best) BASIC26.37■■□□□ 1.81
Pcdha1Q91Y21 Ywhaz-204ENSMUST00000110362 2122 ntAPPRIS P1 TSL 1 (best) BASIC26.37■■□□□ 1.81
Pcdha1Q91Y21 Macrod1-201ENSMUST00000040261 1274 ntAPPRIS P1 TSL 1 (best) BASIC26.37■■□□□ 1.81
Pcdha1Q91Y21 Rhobtb3-202ENSMUST00000109606 1676 ntTSL 1 (best) BASIC26.37■■□□□ 1.81
Pcdha1Q91Y21 Mtch1-201ENSMUST00000095427 1922 ntAPPRIS P3 TSL 1 (best) BASIC26.36■■□□□ 1.81
Pcdha1Q91Y21 Gm24970-201ENSMUST00000175582 82 ntBASIC26.36■■□□□ 1.81
Pcdha1Q91Y21 C530008M17Rik-201ENSMUST00000086909 1844 ntBASIC26.36■■□□□ 1.81
Pcdha1Q91Y21 Phlda1-201ENSMUST00000164773 1949 ntAPPRIS P1 TSL 1 (best) BASIC26.35■■□□□ 1.81
Pcdha1Q91Y21 Ldb1-206ENSMUST00000152946 2108 ntAPPRIS ALT1 TSL 5 BASIC26.35■■□□□ 1.81
Pcdha1Q91Y21 Paip1-203ENSMUST00000126957 1731 ntTSL 5 BASIC26.35■■□□□ 1.81
Pcdha1Q91Y21 Stard3nl-210ENSMUST00000222869 1030 ntTSL 5 BASIC26.35■■□□□ 1.81
Pcdha1Q91Y21 Mxra7-202ENSMUST00000047715 757 ntAPPRIS ALT2 TSL 1 (best) BASIC26.34■■□□□ 1.81
Pcdha1Q91Y21 Fam136a-201ENSMUST00000071492 1643 ntAPPRIS P1 TSL 1 (best) BASIC26.33■■□□□ 1.81
Pcdha1Q91Y21 Znrf3-202ENSMUST00000143746 1022 ntTSL 1 (best) BASIC26.33■■□□□ 1.81
Pcdha1Q91Y21 Gm5814-201ENSMUST00000177586 378 ntAPPRIS P1 BASIC26.33■■□□□ 1.81
Pcdha1Q91Y21 Tlx1-201ENSMUST00000026236 2065 ntAPPRIS P1 TSL 1 (best) BASIC26.33■■□□□ 1.81
Pcdha1Q91Y21 Slc16a6-203ENSMUST00000070872 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC26.33■■□□□ 1.81
Pcdha1Q91Y21 Gm7334-201ENSMUST00000061681 1356 ntAPPRIS P1 BASIC26.33■■□□□ 1.8
Pcdha1Q91Y21 Gng13-201ENSMUST00000115108 347 ntAPPRIS P1 TSL 1 (best) BASIC26.32■■□□□ 1.8
Pcdha1Q91Y21 Ppp1r14b-201ENSMUST00000070850 919 ntAPPRIS P1 TSL 1 (best) BASIC26.32■■□□□ 1.8
Pcdha1Q91Y21 Fbll1-201ENSMUST00000160726 1503 ntAPPRIS P1 BASIC26.3■■□□□ 1.8
Pcdha1Q91Y21 C1qtnf5-201ENSMUST00000114815 1215 ntAPPRIS P1 TSL 1 (best) BASIC26.3■■□□□ 1.8
Pcdha1Q91Y21 Tmem243-201ENSMUST00000115365 1040 ntAPPRIS P1 TSL 2 BASIC26.3■■□□□ 1.8
Pcdha1Q91Y21 Phf10-201ENSMUST00000024657 1663 ntAPPRIS P1 TSL 1 (best) BASIC26.3■■□□□ 1.8
Pcdha1Q91Y21 Noxo1-201ENSMUST00000019464 2238 ntAPPRIS P1 TSL 1 (best) BASIC26.3■■□□□ 1.8
Pcdha1Q91Y21 Plpp2-201ENSMUST00000063879 1654 ntAPPRIS P3 TSL 1 (best) BASIC26.28■■□□□ 1.8
Pcdha1Q91Y21 Reep6-203ENSMUST00000105355 2127 ntAPPRIS ALT2 TSL 1 (best) BASIC26.26■■□□□ 1.79
Pcdha1Q91Y21 Reep6-204ENSMUST00000105357 2127 ntTSL 1 (best) BASIC26.26■■□□□ 1.79
Pcdha1Q91Y21 Apcdd1-202ENSMUST00000163716 1888 ntAPPRIS P1 TSL 1 (best) BASIC26.26■■□□□ 1.79
Pcdha1Q91Y21 Spg7-201ENSMUST00000108868 845 ntTSL 2 BASIC26.26■■□□□ 1.79
Pcdha1Q91Y21 2810459M11Rik-201ENSMUST00000027429 1225 ntAPPRIS ALT2 TSL 1 (best) BASIC26.26■■□□□ 1.79
Pcdha1Q91Y21 Gm45716-202ENSMUST00000134929 2031 ntAPPRIS P1 TSL 1 (best) BASIC26.24■■□□□ 1.79
Pcdha1Q91Y21 Ring1-201ENSMUST00000025183 2034 ntAPPRIS P1 TSL 1 (best) BASIC26.23■■□□□ 1.79
Pcdha1Q91Y21 Dlx6os2-201ENSMUST00000178206 1354 ntBASIC26.22■■□□□ 1.79
Pcdha1Q91Y21 Akt1s1-202ENSMUST00000107880 1757 ntAPPRIS P3 TSL 1 (best) BASIC26.22■■□□□ 1.79
Pcdha1Q91Y21 Fcnaos-201ENSMUST00000127642 1351 ntTSL 1 (best) BASIC26.21■■□□□ 1.79
Pcdha1Q91Y21 A330023F24Rik-201ENSMUST00000181226 955 ntTSL 1 (best) BASIC26.2■■□□□ 1.78
Pcdha1Q91Y21 Reps1-206ENSMUST00000154718 2402 ntTSL 5 BASIC26.2■■□□□ 1.78
Pcdha1Q91Y21 Ywhah-201ENSMUST00000019109 1764 ntAPPRIS P1 TSL 1 (best) BASIC26.2■■□□□ 1.78
Pcdha1Q91Y21 Smad7-202ENSMUST00000168918 1882 ntAPPRIS P1 TSL 1 (best) BASIC26.19■■□□□ 1.78
Pcdha1Q91Y21 Tsen34-203ENSMUST00000108629 1238 ntTSL 1 (best) BASIC26.19■■□□□ 1.78
Pcdha1Q91Y21 Dmwd-201ENSMUST00000032570 2494 ntAPPRIS P2 TSL 1 (best) BASIC26.19■■□□□ 1.78
Pcdha1Q91Y21 Twist1-201ENSMUST00000049089 1628 ntAPPRIS P1 TSL 1 (best) BASIC26.18■■□□□ 1.78
Pcdha1Q91Y21 Srp9-201ENSMUST00000027792 1367 ntAPPRIS P1 TSL 1 (best) BASIC26.16■■□□□ 1.78
Pcdha1Q91Y21 Cetn4-202ENSMUST00000075537 762 ntTSL 3 BASIC26.15■■□□□ 1.78
Pcdha1Q91Y21 Tcte2-204ENSMUST00000130033 1462 ntAPPRIS ALT2 TSL 1 (best) BASIC26.15■■□□□ 1.78
Pcdha1Q91Y21 Hmx1-201ENSMUST00000087674 1526 ntAPPRIS P1 TSL 1 (best) BASIC26.14■■□□□ 1.78
Pcdha1Q91Y21 Gm15672-201ENSMUST00000151512 1354 ntTSL 1 (best) BASIC26.13■■□□□ 1.77
Pcdha1Q91Y21 Gm43863-201ENSMUST00000203822 1192 ntBASIC26.13■■□□□ 1.77
Pcdha1Q91Y21 Ryk-203ENSMUST00000175883 2505 ntAPPRIS P3 TSL 1 (best) BASIC26.11■■□□□ 1.77
Pcdha1Q91Y21 Gnas-207ENSMUST00000109085 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC26.11■■□□□ 1.77
Pcdha1Q91Y21 Ccdc9-202ENSMUST00000118976 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC26.11■■□□□ 1.77
Pcdha1Q91Y21 Egr3-201ENSMUST00000035908 1509 ntAPPRIS ALT1 TSL 1 (best) BASIC26.1■■□□□ 1.77
Pcdha1Q91Y21 Hoxa13-203ENSMUST00000147595 2395 ntAPPRIS P5 TSL 5 BASIC26.1■■□□□ 1.77
Pcdha1Q91Y21 Tpst1-201ENSMUST00000040721 2050 ntAPPRIS P1 TSL 1 (best) BASIC26.08■■□□□ 1.77
Retrieved 100 of 76,532 protein–RNA pairs in 15.9 ms