Protein–RNA interactions for Protein: Q91Y16

Pcdha3, Protocadherin alpha 3, mousemouse

Predictions only

Length 942 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdha3Q91Y16 Trp53rkb-202ENSMUST00000065753 1375 ntTSL 1 (best) BASIC26.55■■□□□ 1.84
Pcdha3Q91Y16 Tlx1-201ENSMUST00000026236 2065 ntAPPRIS P1 TSL 1 (best) BASIC26.54■■□□□ 1.84
Pcdha3Q91Y16 A530058N18Rik-201ENSMUST00000128469 646 ntTSL 2 BASIC26.54■■□□□ 1.84
Pcdha3Q91Y16 Pth1r-202ENSMUST00000166716 2219 ntAPPRIS P1 TSL 1 (best) BASIC26.54■■□□□ 1.84
Pcdha3Q91Y16 Ric1-206ENSMUST00000162184 2157 ntTSL 1 (best) BASIC26.53■■□□□ 1.84
Pcdha3Q91Y16 Upp2-202ENSMUST00000071543 2150 ntTSL 1 (best) BASIC26.53■■□□□ 1.84
Pcdha3Q91Y16 Fcnaos-201ENSMUST00000127642 1351 ntTSL 1 (best) BASIC26.51■■□□□ 1.83
Pcdha3Q91Y16 2210008F06Rik-201ENSMUST00000180805 1082 ntTSL 1 (best) BASIC26.51■■□□□ 1.83
Pcdha3Q91Y16 Traf4-201ENSMUST00000017530 2078 ntAPPRIS P1 TSL 1 (best) BASIC26.51■■□□□ 1.83
Pcdha3Q91Y16 Ebag9-203ENSMUST00000227691 1945 ntAPPRIS P1 BASIC26.51■■□□□ 1.83
Pcdha3Q91Y16 1700028N14Rik-201ENSMUST00000139621 747 ntTSL 1 (best) BASIC26.49■■□□□ 1.83
Pcdha3Q91Y16 Ubl4a-207ENSMUST00000178691 1038 ntAPPRIS P1 TSL 2 BASIC26.47■■□□□ 1.83
Pcdha3Q91Y16 Gkap1-201ENSMUST00000091579 1523 ntAPPRIS P1 TSL 1 (best) BASIC26.47■■□□□ 1.83
Pcdha3Q91Y16 Galnt10-202ENSMUST00000108846 1745 ntTSL 1 (best) BASIC26.47■■□□□ 1.83
Pcdha3Q91Y16 Hoxa13-203ENSMUST00000147595 2395 ntAPPRIS P5 TSL 5 BASIC26.47■■□□□ 1.83
Pcdha3Q91Y16 Plpp2-201ENSMUST00000063879 1654 ntAPPRIS P3 TSL 1 (best) BASIC26.46■■□□□ 1.83
Pcdha3Q91Y16 Fam60a-203ENSMUST00000111562 906 ntAPPRIS P1 TSL 3 BASIC26.45■■□□□ 1.82
Pcdha3Q91Y16 E330040D14Rik-201ENSMUST00000192299 1374 ntBASIC26.44■■□□□ 1.82
Pcdha3Q91Y16 Gm266-201ENSMUST00000010673 1215 ntAPPRIS P1 BASIC26.42■■□□□ 1.82
Pcdha3Q91Y16 Pard6a-205ENSMUST00000212430 1261 ntAPPRIS ALT1 TSL 1 (best) BASIC26.42■■□□□ 1.82
Pcdha3Q91Y16 Vsig8-202ENSMUST00000177086 1519 ntTSL 1 (best) BASIC26.41■■□□□ 1.82
Pcdha3Q91Y16 Orai1-201ENSMUST00000051016 1482 ntAPPRIS P1 TSL 1 (best) BASIC26.41■■□□□ 1.82
Pcdha3Q91Y16 Eif2ak3-204ENSMUST00000162950 927 ntTSL 1 (best) BASIC26.4■■□□□ 1.82
Pcdha3Q91Y16 Ranbp1-202ENSMUST00000115645 1085 ntAPPRIS P1 TSL 1 (best) BASIC26.39■■□□□ 1.82
Pcdha3Q91Y16 Ccdc122-202ENSMUST00000095625 1195 ntAPPRIS ALT2 TSL 1 (best) BASIC26.38■■□□□ 1.81
Pcdha3Q91Y16 CT030161.2-201ENSMUST00000218666 735 ntTSL 3 BASIC26.36■■□□□ 1.81
Pcdha3Q91Y16 Zxda-201ENSMUST00000117281 2621 ntBASIC26.35■■□□□ 1.81
Pcdha3Q91Y16 Plin1-206ENSMUST00000205915 2817 ntAPPRIS P1 TSL 1 (best) BASIC26.35■■□□□ 1.81
Pcdha3Q91Y16 Gm6206-201ENSMUST00000133472 2199 ntBASIC26.34■■□□□ 1.81
Pcdha3Q91Y16 Lmo2-201ENSMUST00000111139 1434 ntTSL 5 BASIC26.34■■□□□ 1.81
Pcdha3Q91Y16 1700069B07Rik-202ENSMUST00000191155 939 ntBASIC26.34■■□□□ 1.81
Pcdha3Q91Y16 Ppp1r3e-202ENSMUST00000177403 1957 ntAPPRIS P1 TSL 5 BASIC26.34■■□□□ 1.81
Pcdha3Q91Y16 Sept11-208ENSMUST00000202308 1792 ntAPPRIS ALT1 TSL 5 BASIC26.33■■□□□ 1.81
Pcdha3Q91Y16 Gnas-207ENSMUST00000109085 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC26.33■■□□□ 1.8
Pcdha3Q91Y16 Galnt12-201ENSMUST00000045041 2288 ntAPPRIS P1 TSL 1 (best) BASIC26.32■■□□□ 1.8
Pcdha3Q91Y16 Ube2f-202ENSMUST00000171112 1547 ntAPPRIS P1 TSL 1 (best) BASIC26.31■■□□□ 1.8
Pcdha3Q91Y16 Raly-201ENSMUST00000029120 1802 ntAPPRIS ALT2 TSL 5 BASIC26.31■■□□□ 1.8
Pcdha3Q91Y16 Hexdc-202ENSMUST00000106117 2149 ntAPPRIS P2 TSL 1 (best) BASIC26.31■■□□□ 1.8
Pcdha3Q91Y16 A530058N18Rik-207ENSMUST00000152254 1211 ntTSL 1 (best) BASIC26.31■■□□□ 1.8
Pcdha3Q91Y16 Reep6-203ENSMUST00000105355 2127 ntAPPRIS ALT2 TSL 1 (best) BASIC26.3■■□□□ 1.8
Pcdha3Q91Y16 Reep6-204ENSMUST00000105357 2127 ntTSL 1 (best) BASIC26.3■■□□□ 1.8
Pcdha3Q91Y16 Gm9905-201ENSMUST00000065740 1845 ntBASIC26.3■■□□□ 1.8
Pcdha3Q91Y16 Fbll1-201ENSMUST00000160726 1503 ntAPPRIS P1 BASIC26.29■■□□□ 1.8
Pcdha3Q91Y16 Bok-201ENSMUST00000027499 1468 ntAPPRIS P1 TSL 1 (best) BASIC26.29■■□□□ 1.8
Pcdha3Q91Y16 Adap1-201ENSMUST00000110865 2557 ntAPPRIS P1 TSL 5 BASIC26.28■■□□□ 1.8
Pcdha3Q91Y16 Gltp-203ENSMUST00000112214 944 ntTSL 3 BASIC26.28■■□□□ 1.8
Pcdha3Q91Y16 Hnrnpd-202ENSMUST00000072750 1537 ntAPPRIS ALT2 TSL 3 BASIC26.28■■□□□ 1.8
Pcdha3Q91Y16 Pfdn2-202ENSMUST00000135941 1735 ntAPPRIS P1 TSL 1 (best) BASIC26.28■■□□□ 1.8
Pcdha3Q91Y16 Tmeff1-202ENSMUST00000123476 1224 ntAPPRIS P1 TSL 1 (best) BASIC26.27■■□□□ 1.8
Pcdha3Q91Y16 Gjc1-201ENSMUST00000068933 1903 ntAPPRIS P1 TSL 1 (best) BASIC26.27■■□□□ 1.8
Pcdha3Q91Y16 Rnf220-212ENSMUST00000221654 1949 ntTSL 1 (best) BASIC26.26■■□□□ 1.79
Pcdha3Q91Y16 Ube2m-201ENSMUST00000005714 1472 ntAPPRIS P1 TSL 1 (best) BASIC26.26■■□□□ 1.79
Pcdha3Q91Y16 Gm10762-201ENSMUST00000099385 1133 ntAPPRIS P1 BASIC26.26■■□□□ 1.79
Pcdha3Q91Y16 Tdp2-203ENSMUST00000223804 1136 ntBASIC26.24■■□□□ 1.79
Pcdha3Q91Y16 Hoxa13-201ENSMUST00000047993 1309 ntAPPRIS ALT2 TSL 5 BASIC26.23■■□□□ 1.79
Pcdha3Q91Y16 Cds2-203ENSMUST00000110158 1247 ntTSL 1 (best) BASIC26.23■■□□□ 1.79
Pcdha3Q91Y16 Ctbp1-201ENSMUST00000079746 2279 ntAPPRIS P3 TSL 1 (best) BASIC26.23■■□□□ 1.79
Pcdha3Q91Y16 Paip1-203ENSMUST00000126957 1731 ntTSL 5 BASIC26.22■■□□□ 1.79
Pcdha3Q91Y16 Aard-201ENSMUST00000090025 1348 ntAPPRIS P1 TSL 1 (best) BASIC26.22■■□□□ 1.79
Pcdha3Q91Y16 Micu3-201ENSMUST00000068999 2219 ntAPPRIS P1 TSL 5 BASIC26.22■■□□□ 1.79
Pcdha3Q91Y16 Macrod2-205ENSMUST00000110063 845 ntTSL 5 BASIC26.21■■□□□ 1.79
Pcdha3Q91Y16 Uncx-201ENSMUST00000172997 2498 ntAPPRIS P1 TSL 1 (best) BASIC26.2■■□□□ 1.78
Pcdha3Q91Y16 1700016A09Rik-201ENSMUST00000192004 835 ntBASIC26.2■■□□□ 1.78
Pcdha3Q91Y16 Runx3-202ENSMUST00000119564 1855 ntAPPRIS ALT2 TSL 1 (best) BASIC26.19■■□□□ 1.78
Pcdha3Q91Y16 Bok-205ENSMUST00000201863 883 ntAPPRIS P1 TSL 5 BASIC26.19■■□□□ 1.78
Pcdha3Q91Y16 Gm6345-201ENSMUST00000180378 1691 ntBASIC26.19■■□□□ 1.78
Pcdha3Q91Y16 Gm43445-201ENSMUST00000198564 2091 ntBASIC26.18■■□□□ 1.78
Pcdha3Q91Y16 Akt1s1-202ENSMUST00000107880 1757 ntAPPRIS P3 TSL 1 (best) BASIC26.18■■□□□ 1.78
Pcdha3Q91Y16 Fam136a-201ENSMUST00000071492 1643 ntAPPRIS P1 TSL 1 (best) BASIC26.17■■□□□ 1.78
Pcdha3Q91Y16 Gm5814-201ENSMUST00000177586 378 ntAPPRIS P1 BASIC26.17■■□□□ 1.78
Pcdha3Q91Y16 Zfp131-206ENSMUST00000223813 2561 ntAPPRIS P3 BASIC26.16■■□□□ 1.78
Pcdha3Q91Y16 Ttc19-202ENSMUST00000101075 2193 ntAPPRIS ALT2 TSL 1 (best) BASIC26.16■■□□□ 1.78
Pcdha3Q91Y16 Mfsd5-201ENSMUST00000051341 1742 ntAPPRIS P1 TSL 1 (best) BASIC26.15■■□□□ 1.78
Pcdha3Q91Y16 Gm30346-201ENSMUST00000218641 1699 ntBASIC26.15■■□□□ 1.78
Pcdha3Q91Y16 Susd4-202ENSMUST00000153348 1898 ntAPPRIS P1 TSL 5 BASIC26.12■■□□□ 1.77
Pcdha3Q91Y16 Cebpb-201ENSMUST00000070642 1504 ntAPPRIS P1 BASIC26.12■■□□□ 1.77
Pcdha3Q91Y16 Eif4e2-203ENSMUST00000113230 1569 ntTSL 1 (best) BASIC26.12■■□□□ 1.77
Pcdha3Q91Y16 Cldnd1-201ENSMUST00000023426 2147 ntAPPRIS P1 TSL 1 (best) BASIC26.11■■□□□ 1.77
Pcdha3Q91Y16 Fbxo6-201ENSMUST00000030858 1346 ntAPPRIS P1 TSL 1 (best) BASIC26.1■■□□□ 1.77
Pcdha3Q91Y16 Ssbp3-202ENSMUST00000072753 1924 ntTSL 1 (best) BASIC26.1■■□□□ 1.77
Pcdha3Q91Y16 Gm7334-201ENSMUST00000061681 1356 ntAPPRIS P1 BASIC26.09■■□□□ 1.77
Pcdha3Q91Y16 Sowahd-201ENSMUST00000060057 1574 ntAPPRIS P1 BASIC26.08■■□□□ 1.77
Pcdha3Q91Y16 6530409C15Rik-202ENSMUST00000143551 1573 ntTSL 1 (best) BASIC26.07■■□□□ 1.76
Pcdha3Q91Y16 Zfp787-201ENSMUST00000094870 1897 ntAPPRIS P1 TSL 1 (best) BASIC26.06■■□□□ 1.76
Pcdha3Q91Y16 Smarcc1-203ENSMUST00000197480 1949 ntTSL 1 (best) BASIC26.06■■□□□ 1.76
Pcdha3Q91Y16 Phlda1-201ENSMUST00000164773 1949 ntAPPRIS P1 TSL 1 (best) BASIC26.06■■□□□ 1.76
Pcdha3Q91Y16 Rnd2-201ENSMUST00000001347 1394 ntAPPRIS P1 TSL 1 (best) BASIC26.05■■□□□ 1.76
Pcdha3Q91Y16 Mogs-201ENSMUST00000032114 2780 ntAPPRIS P1 TSL 1 (best) BASIC26.04■■□□□ 1.76
Pcdha3Q91Y16 Mrps7-201ENSMUST00000058109 1962 ntAPPRIS P1 TSL 1 (best) BASIC26.04■■□□□ 1.76
Pcdha3Q91Y16 Guf1-201ENSMUST00000031113 1769 ntTSL 1 (best) BASIC26.03■■□□□ 1.76
Pcdha3Q91Y16 Znrf3-202ENSMUST00000143746 1022 ntTSL 1 (best) BASIC26.03■■□□□ 1.76
Pcdha3Q91Y16 1190005I06Rik-201ENSMUST00000123927 844 ntAPPRIS P2 TSL 1 (best) BASIC25.97■■□□□ 1.75
Pcdha3Q91Y16 Dapk3-202ENSMUST00000178422 1730 ntAPPRIS P1 TSL 1 (best) BASIC25.97■■□□□ 1.75
Pcdha3Q91Y16 Dedd-201ENSMUST00000064950 1618 ntAPPRIS P1 TSL 1 (best) BASIC25.96■■□□□ 1.75
Pcdha3Q91Y16 Arl2bp-201ENSMUST00000034228 2063 ntAPPRIS P1 TSL 1 (best) BASIC25.96■■□□□ 1.75
Pcdha3Q91Y16 Ildr2-205ENSMUST00000193860 2320 ntTSL 1 (best) BASIC25.96■■□□□ 1.75
Pcdha3Q91Y16 B4galt7-202ENSMUST00000100764 2195 ntTSL 1 (best) BASIC25.96■■□□□ 1.75
Pcdha3Q91Y16 Hrh3-208ENSMUST00000171736 906 ntTSL 5 BASIC25.95■■□□□ 1.74
Pcdha3Q91Y16 Rundc3a-204ENSMUST00000107105 1861 ntTSL 1 (best) BASIC25.95■■□□□ 1.74
Pcdha3Q91Y16 4921531C22Rik-201ENSMUST00000150145 1905 ntTSL 1 (best) BASIC25.94■■□□□ 1.74
Retrieved 100 of 76,532 protein–RNA pairs in 73.2 ms