Protein–RNA interactions for Protein: Q91XX9

Pcdhga9, Protocadherin gamma A9, mousemouse

Predictions only

Length 932 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhga9Q91XX9 Reep6-203ENSMUST00000105355 2127 ntAPPRIS ALT2 TSL 1 (best) BASIC25.14■■□□□ 1.62
Pcdhga9Q91XX9 Reep6-204ENSMUST00000105357 2127 ntTSL 1 (best) BASIC25.14■■□□□ 1.62
Pcdhga9Q91XX9 Gtf2a2-203ENSMUST00000119413 1034 ntAPPRIS P1 TSL 1 (best) BASIC25.14■■□□□ 1.62
Pcdhga9Q91XX9 A530058N18Rik-201ENSMUST00000128469 646 ntTSL 2 BASIC25.14■■□□□ 1.62
Pcdhga9Q91XX9 Tmeff1-201ENSMUST00000030032 2461 ntAPPRIS P1 TSL 1 (best) BASIC25.14■■□□□ 1.61
Pcdhga9Q91XX9 E330040D14Rik-201ENSMUST00000192299 1374 ntBASIC25.14■■□□□ 1.61
Pcdhga9Q91XX9 Rpl19-ps4-201ENSMUST00000167150 625 ntBASIC25.13■■□□□ 1.61
Pcdhga9Q91XX9 Ube2m-201ENSMUST00000005714 1472 ntAPPRIS P1 TSL 1 (best) BASIC25.13■■□□□ 1.61
Pcdhga9Q91XX9 Ring1-201ENSMUST00000025183 2034 ntAPPRIS P1 TSL 1 (best) BASIC25.12■■□□□ 1.61
Pcdhga9Q91XX9 Gm266-201ENSMUST00000010673 1215 ntAPPRIS P1 BASIC25.11■■□□□ 1.61
Pcdhga9Q91XX9 Ube2f-202ENSMUST00000171112 1547 ntAPPRIS P1 TSL 1 (best) BASIC25.11■■□□□ 1.61
Pcdhga9Q91XX9 Cnot6l-203ENSMUST00000122003 2089 ntTSL 1 (best) BASIC25.1■■□□□ 1.61
Pcdhga9Q91XX9 Tdp2-203ENSMUST00000223804 1136 ntBASIC25.1■■□□□ 1.61
Pcdhga9Q91XX9 Gnas-207ENSMUST00000109085 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC25.09■■□□□ 1.61
Pcdhga9Q91XX9 C530008M17Rik-201ENSMUST00000086909 1844 ntBASIC25.09■■□□□ 1.61
Pcdhga9Q91XX9 Bok-201ENSMUST00000027499 1468 ntAPPRIS P1 TSL 1 (best) BASIC25.09■■□□□ 1.61
Pcdhga9Q91XX9 Fam136a-201ENSMUST00000071492 1643 ntAPPRIS P1 TSL 1 (best) BASIC25.08■■□□□ 1.6
Pcdhga9Q91XX9 CT030161.2-201ENSMUST00000218666 735 ntTSL 3 BASIC25.07■■□□□ 1.6
Pcdhga9Q91XX9 Ccdc122-202ENSMUST00000095625 1195 ntAPPRIS ALT2 TSL 1 (best) BASIC25.07■■□□□ 1.6
Pcdhga9Q91XX9 Gm10762-201ENSMUST00000099385 1133 ntAPPRIS P1 BASIC25.06■■□□□ 1.6
Pcdhga9Q91XX9 Gm45716-202ENSMUST00000134929 2031 ntAPPRIS P1 TSL 1 (best) BASIC25.06■■□□□ 1.6
Pcdhga9Q91XX9 Apcdd1-202ENSMUST00000163716 1888 ntAPPRIS P1 TSL 1 (best) BASIC25.06■■□□□ 1.6
Pcdhga9Q91XX9 Noxo1-201ENSMUST00000019464 2238 ntAPPRIS P1 TSL 1 (best) BASIC25.04■■□□□ 1.6
Pcdhga9Q91XX9 Smad7-202ENSMUST00000168918 1882 ntAPPRIS P1 TSL 1 (best) BASIC25.03■■□□□ 1.6
Pcdhga9Q91XX9 Pradc1-201ENSMUST00000032080 1038 ntAPPRIS P1 TSL 1 (best) BASIC25.03■■□□□ 1.6
Pcdhga9Q91XX9 Ywhah-201ENSMUST00000019109 1764 ntAPPRIS P1 TSL 1 (best) BASIC25.03■■□□□ 1.6
Pcdhga9Q91XX9 AC153504.1-201ENSMUST00000218379 2290 ntBASIC25.02■■□□□ 1.6
Pcdhga9Q91XX9 1700016A09Rik-201ENSMUST00000192004 835 ntBASIC25.02■■□□□ 1.6
Pcdhga9Q91XX9 Bok-205ENSMUST00000201863 883 ntAPPRIS P1 TSL 5 BASIC25.02■■□□□ 1.6
Pcdhga9Q91XX9 Slc16a6-203ENSMUST00000070872 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC25.01■■□□□ 1.59
Pcdhga9Q91XX9 Gm5814-201ENSMUST00000177586 378 ntAPPRIS P1 BASIC25■■□□□ 1.59
Pcdhga9Q91XX9 Akt1s1-202ENSMUST00000107880 1757 ntAPPRIS P3 TSL 1 (best) BASIC24.99■■□□□ 1.59
Pcdhga9Q91XX9 Tmeff1-202ENSMUST00000123476 1224 ntAPPRIS P1 TSL 1 (best) BASIC24.98■■□□□ 1.59
Pcdhga9Q91XX9 Gm7334-201ENSMUST00000061681 1356 ntAPPRIS P1 BASIC24.97■■□□□ 1.59
Pcdhga9Q91XX9 Phlda1-201ENSMUST00000164773 1949 ntAPPRIS P1 TSL 1 (best) BASIC24.97■■□□□ 1.59
Pcdhga9Q91XX9 Ap1ar-210ENSMUST00000200409 2580 ntTSL 5 BASIC24.96■■□□□ 1.59
Pcdhga9Q91XX9 Ywhaz-204ENSMUST00000110362 2122 ntAPPRIS P1 TSL 1 (best) BASIC24.95■■□□□ 1.58
Pcdhga9Q91XX9 Hoxa13-203ENSMUST00000147595 2395 ntAPPRIS P5 TSL 5 BASIC24.93■■□□□ 1.58
Pcdhga9Q91XX9 Eif4e2-203ENSMUST00000113230 1569 ntTSL 1 (best) BASIC24.92■■□□□ 1.58
Pcdhga9Q91XX9 1190005I06Rik-201ENSMUST00000123927 844 ntAPPRIS P2 TSL 1 (best) BASIC24.91■■□□□ 1.58
Pcdhga9Q91XX9 Gm30346-201ENSMUST00000218641 1699 ntBASIC24.9■■□□□ 1.58
Pcdhga9Q91XX9 Ebag9-203ENSMUST00000227691 1945 ntAPPRIS P1 BASIC24.9■■□□□ 1.58
Pcdhga9Q91XX9 Cebpb-201ENSMUST00000070642 1504 ntAPPRIS P1 BASIC24.89■■□□□ 1.57
Pcdhga9Q91XX9 Macrod2-205ENSMUST00000110063 845 ntTSL 5 BASIC24.88■■□□□ 1.57
Pcdhga9Q91XX9 Cds2-203ENSMUST00000110158 1247 ntTSL 1 (best) BASIC24.88■■□□□ 1.57
Pcdhga9Q91XX9 Lsm4-204ENSMUST00000210071 575 ntTSL 5 BASIC24.88■■□□□ 1.57
Pcdhga9Q91XX9 Gjc1-201ENSMUST00000068933 1903 ntAPPRIS P1 TSL 1 (best) BASIC24.88■■□□□ 1.57
Pcdhga9Q91XX9 Gm527-203ENSMUST00000220993 1090 ntTSL 5 BASIC24.87■■□□□ 1.57
Pcdhga9Q91XX9 Dmwd-201ENSMUST00000032570 2494 ntAPPRIS P2 TSL 1 (best) BASIC24.87■■□□□ 1.57
Pcdhga9Q91XX9 Hmx1-201ENSMUST00000087674 1526 ntAPPRIS P1 TSL 1 (best) BASIC24.86■■□□□ 1.57
Pcdhga9Q91XX9 Nrtn-201ENSMUST00000044752 1023 ntAPPRIS P1 TSL 1 (best) BASIC24.85■■□□□ 1.57
Pcdhga9Q91XX9 Hoxa13-201ENSMUST00000047993 1309 ntAPPRIS ALT2 TSL 5 BASIC24.85■■□□□ 1.57
Pcdhga9Q91XX9 A530058N18Rik-207ENSMUST00000152254 1211 ntTSL 1 (best) BASIC24.84■■□□□ 1.57
Pcdhga9Q91XX9 6530409C15Rik-202ENSMUST00000143551 1573 ntTSL 1 (best) BASIC24.84■■□□□ 1.57
Pcdhga9Q91XX9 Tpst1-201ENSMUST00000040721 2050 ntAPPRIS P1 TSL 1 (best) BASIC24.83■■□□□ 1.57
Pcdhga9Q91XX9 Gm45855-201ENSMUST00000212546 880 ntBASIC24.82■■□□□ 1.56
Pcdhga9Q91XX9 Sowahd-201ENSMUST00000060057 1574 ntAPPRIS P1 BASIC24.82■■□□□ 1.56
Pcdhga9Q91XX9 Aard-201ENSMUST00000090025 1348 ntAPPRIS P1 TSL 1 (best) BASIC24.82■■□□□ 1.56
Pcdhga9Q91XX9 Ric1-206ENSMUST00000162184 2157 ntTSL 1 (best) BASIC24.81■■□□□ 1.56
Pcdhga9Q91XX9 Ywhaq-202ENSMUST00000103002 2110 ntAPPRIS P1 TSL 1 (best) BASIC24.79■■□□□ 1.56
Pcdhga9Q91XX9 Galnt10-202ENSMUST00000108846 1745 ntTSL 1 (best) BASIC24.78■■□□□ 1.56
Pcdhga9Q91XX9 Mrps7-201ENSMUST00000058109 1962 ntAPPRIS P1 TSL 1 (best) BASIC24.78■■□□□ 1.56
Pcdhga9Q91XX9 Gm6345-201ENSMUST00000180378 1691 ntBASIC24.78■■□□□ 1.56
Pcdhga9Q91XX9 Rnd2-201ENSMUST00000001347 1394 ntAPPRIS P1 TSL 1 (best) BASIC24.78■■□□□ 1.56
Pcdhga9Q91XX9 Runx3-202ENSMUST00000119564 1855 ntAPPRIS ALT2 TSL 1 (best) BASIC24.77■■□□□ 1.56
Pcdhga9Q91XX9 Susd4-202ENSMUST00000153348 1898 ntAPPRIS P1 TSL 5 BASIC24.75■■□□□ 1.55
Pcdhga9Q91XX9 Traf4-201ENSMUST00000017530 2078 ntAPPRIS P1 TSL 1 (best) BASIC24.75■■□□□ 1.55
Pcdhga9Q91XX9 Cxxc4-203ENSMUST00000181904 5694 ntAPPRIS P2 TSL 5 BASIC24.75■■□□□ 1.55
Pcdhga9Q91XX9 AC150314.2-201ENSMUST00000214135 834 ntTSL 5 BASIC24.74■■□□□ 1.55
Pcdhga9Q91XX9 Tcte2-204ENSMUST00000130033 1462 ntAPPRIS ALT2 TSL 1 (best) BASIC24.73■■□□□ 1.55
Pcdhga9Q91XX9 Znrf3-202ENSMUST00000143746 1022 ntTSL 1 (best) BASIC24.73■■□□□ 1.55
Pcdhga9Q91XX9 Dtnbp1-201ENSMUST00000072329 1362 ntAPPRIS P2 TSL 1 (best) BASIC24.72■■□□□ 1.55
Pcdhga9Q91XX9 Tnfsfm13-201ENSMUST00000108649 1049 ntAPPRIS ALT2 TSL 5 BASIC24.72■■□□□ 1.55
Pcdhga9Q91XX9 Mfsd5-201ENSMUST00000051341 1742 ntAPPRIS P1 TSL 1 (best) BASIC24.72■■□□□ 1.55
Pcdhga9Q91XX9 Pitpna-205ENSMUST00000179445 1665 ntAPPRIS ALT1 TSL 5 BASIC24.72■■□□□ 1.55
Pcdhga9Q91XX9 Dazap1-203ENSMUST00000105362 2081 ntAPPRIS P3 TSL 1 (best) BASIC24.71■■□□□ 1.55
Pcdhga9Q91XX9 Rab40c-201ENSMUST00000026826 2466 ntAPPRIS P1 TSL 1 (best) BASIC24.71■■□□□ 1.55
Pcdhga9Q91XX9 Dapk3-202ENSMUST00000178422 1730 ntAPPRIS P1 TSL 1 (best) BASIC24.7■■□□□ 1.54
Pcdhga9Q91XX9 Cdk2ap1-201ENSMUST00000031341 1315 ntAPPRIS P2 TSL 1 (best) BASIC24.7■■□□□ 1.54
Pcdhga9Q91XX9 1110008F13Rik-201ENSMUST00000029165 1045 ntAPPRIS P1 TSL 1 (best) BASIC24.7■■□□□ 1.54
Pcdhga9Q91XX9 Macrod1-201ENSMUST00000040261 1274 ntAPPRIS P1 TSL 1 (best) BASIC24.7■■□□□ 1.54
Pcdhga9Q91XX9 Reps1-206ENSMUST00000154718 2402 ntTSL 5 BASIC24.7■■□□□ 1.54
Pcdhga9Q91XX9 Guf1-201ENSMUST00000031113 1769 ntTSL 1 (best) BASIC24.7■■□□□ 1.54
Pcdhga9Q91XX9 Fbxo6-201ENSMUST00000030858 1346 ntAPPRIS P1 TSL 1 (best) BASIC24.69■■□□□ 1.54
Pcdhga9Q91XX9 Dedd-201ENSMUST00000064950 1618 ntAPPRIS P1 TSL 1 (best) BASIC24.68■■□□□ 1.54
Pcdhga9Q91XX9 Fam69b-201ENSMUST00000074240 1622 ntAPPRIS P1 TSL 1 (best) BASIC24.66■■□□□ 1.54
Pcdhga9Q91XX9 Pdia5-201ENSMUST00000023550 1808 ntAPPRIS P1 TSL 1 (best) BASIC24.65■■□□□ 1.54
Pcdhga9Q91XX9 Raly-201ENSMUST00000029120 1802 ntAPPRIS ALT2 TSL 5 BASIC24.65■■□□□ 1.54
Pcdhga9Q91XX9 Ryk-203ENSMUST00000175883 2505 ntAPPRIS P3 TSL 1 (best) BASIC24.65■■□□□ 1.54
Pcdhga9Q91XX9 Gm9397-201ENSMUST00000200125 605 ntBASIC24.65■■□□□ 1.54
Pcdhga9Q91XX9 Pfdn2-202ENSMUST00000135941 1735 ntAPPRIS P1 TSL 1 (best) BASIC24.64■■□□□ 1.53
Pcdhga9Q91XX9 Gm527-201ENSMUST00000058135 1468 ntAPPRIS P1 TSL 1 (best) BASIC24.63■■□□□ 1.53
Pcdhga9Q91XX9 Ssbp3-202ENSMUST00000072753 1924 ntTSL 1 (best) BASIC24.63■■□□□ 1.53
Pcdhga9Q91XX9 Ppp1r3e-202ENSMUST00000177403 1957 ntAPPRIS P1 TSL 5 BASIC24.62■■□□□ 1.53
Pcdhga9Q91XX9 Capns1-201ENSMUST00000001845 1600 ntAPPRIS P2 TSL 5 BASIC24.62■■□□□ 1.53
Pcdhga9Q91XX9 Smarcc1-203ENSMUST00000197480 1949 ntTSL 1 (best) BASIC24.61■■□□□ 1.53
Pcdhga9Q91XX9 4932443I19Rik-201ENSMUST00000166277 799 ntAPPRIS P2 TSL 1 (best) BASIC24.61■■□□□ 1.53
Pcdhga9Q91XX9 Hrh3-208ENSMUST00000171736 906 ntTSL 5 BASIC24.61■■□□□ 1.53
Pcdhga9Q91XX9 Smarcc2-205ENSMUST00000218228 603 ntTSL 5 BASIC24.61■■□□□ 1.53
Pcdhga9Q91XX9 Iffo2-203ENSMUST00000174078 5716 ntAPPRIS ALT2 TSL 1 (best) BASIC24.6■■□□□ 1.53
Retrieved 100 of 76,532 protein–RNA pairs in 53.2 ms