Protein–RNA interactions for Protein: Q8VHR0

Pcdh18, Protocadherin 18, mousemouse

Predictions only

Length 1,134 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh18Q8VHR0 Dlg1-203ENSMUST00000100001 4711 ntAPPRIS ALT2 TSL 5 BASIC24.05■■□□□ 1.44
Pcdh18Q8VHR0 Fcho2-203ENSMUST00000109403 1523 ntTSL 5 BASIC24.05■■□□□ 1.44
Pcdh18Q8VHR0 Gpr12-201ENSMUST00000036211 2219 ntAPPRIS P1 TSL 1 (best) BASIC24.04■■□□□ 1.44
Pcdh18Q8VHR0 Ssbp3-203ENSMUST00000097934 1742 ntAPPRIS ALT2 TSL 5 BASIC24.04■■□□□ 1.44
Pcdh18Q8VHR0 Fezf2-202ENSMUST00000224023 1917 ntBASIC24.04■■□□□ 1.44
Pcdh18Q8VHR0 Nkx1-1-201ENSMUST00000173348 1209 ntAPPRIS P1 TSL 5 BASIC24.03■■□□□ 1.44
Pcdh18Q8VHR0 BC030336-205ENSMUST00000208454 813 ntTSL 2 BASIC24.02■■□□□ 1.44
Pcdh18Q8VHR0 Rab40c-209ENSMUST00000179998 2456 ntAPPRIS P1 TSL 5 BASIC24.02■■□□□ 1.44
Pcdh18Q8VHR0 Clec2l-201ENSMUST00000114874 1428 ntAPPRIS P1 TSL 2 BASIC24.01■■□□□ 1.43
Pcdh18Q8VHR0 Fam220a-204ENSMUST00000119488 2202 ntTSL 1 (best) BASIC24.01■■□□□ 1.43
Pcdh18Q8VHR0 Fam220a-209ENSMUST00000200267 2202 ntAPPRIS P1 TSL 1 (best) BASIC24.01■■□□□ 1.43
Pcdh18Q8VHR0 Gm17082-201ENSMUST00000166043 1091 ntBASIC24.01■■□□□ 1.43
Pcdh18Q8VHR0 Gm27322-201ENSMUST00000184007 104 ntBASIC24.01■■□□□ 1.43
Pcdh18Q8VHR0 Iffo2-203ENSMUST00000174078 5716 ntAPPRIS ALT2 TSL 1 (best) BASIC24.01■■□□□ 1.43
Pcdh18Q8VHR0 2410017I17Rik-202ENSMUST00000090537 2053 ntTSL 2 BASIC23.98■■□□□ 1.43
Pcdh18Q8VHR0 Bcl7c-201ENSMUST00000061468 1132 ntAPPRIS P1 TSL 1 (best) BASIC23.98■■□□□ 1.43
Pcdh18Q8VHR0 Atp5a1-202ENSMUST00000114748 2674 ntTSL 1 (best) BASIC23.98■■□□□ 1.43
Pcdh18Q8VHR0 Gltp-201ENSMUST00000012028 1762 ntAPPRIS P1 TSL 1 (best) BASIC23.96■■□□□ 1.43
Pcdh18Q8VHR0 Agap3-201ENSMUST00000024123 3207 ntAPPRIS P1 TSL 1 (best) BASIC23.95■■□□□ 1.42
Pcdh18Q8VHR0 Amer2-203ENSMUST00000225247 2662 ntBASIC23.95■■□□□ 1.42
Pcdh18Q8VHR0 Mapk3-201ENSMUST00000050201 1267 ntAPPRIS ALT2 TSL 3 BASIC23.94■■□□□ 1.42
Pcdh18Q8VHR0 Gm8066-201ENSMUST00000197762 485 ntTSL 3 BASIC23.93■■□□□ 1.42
Pcdh18Q8VHR0 Snta1-202ENSMUST00000109728 2131 ntAPPRIS P2 TSL 1 (best) BASIC23.93■■□□□ 1.42
Pcdh18Q8VHR0 Snta1-201ENSMUST00000028991 2125 ntAPPRIS ALT2 TSL 1 (best) BASIC23.93■■□□□ 1.42
Pcdh18Q8VHR0 AC153890.1-201ENSMUST00000220021 2469 ntBASIC23.92■■□□□ 1.42
Pcdh18Q8VHR0 Nectin3-203ENSMUST00000096052 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC23.92■■□□□ 1.42
Pcdh18Q8VHR0 Rgs7-206ENSMUST00000194555 2431 ntAPPRIS ALT2 TSL 1 (best) BASIC23.91■■□□□ 1.42
Pcdh18Q8VHR0 Kcna7-201ENSMUST00000107774 2182 ntAPPRIS P1 TSL 1 (best) BASIC23.91■■□□□ 1.42
Pcdh18Q8VHR0 Marveld2-202ENSMUST00000163163 2187 ntTSL 1 (best) BASIC23.91■■□□□ 1.42
Pcdh18Q8VHR0 AC166822.3-201ENSMUST00000227394 661 ntBASIC23.9■■□□□ 1.42
Pcdh18Q8VHR0 Maz-204ENSMUST00000206254 2282 ntTSL 5 BASIC23.9■■□□□ 1.42
Pcdh18Q8VHR0 Tpm1-216ENSMUST00000113707 1898 ntTSL 1 (best) BASIC23.9■■□□□ 1.42
Pcdh18Q8VHR0 Panx2-202ENSMUST00000161372 2314 ntTSL 1 (best) BASIC23.89■■□□□ 1.41
Pcdh18Q8VHR0 Enho-201ENSMUST00000127306 1269 ntAPPRIS P1 TSL 1 (best) BASIC23.88■■□□□ 1.41
Pcdh18Q8VHR0 Rcor2-201ENSMUST00000066646 2801 ntAPPRIS P1 TSL 1 (best) BASIC23.88■■□□□ 1.41
Pcdh18Q8VHR0 Kcnc3-206ENSMUST00000208651 2728 ntAPPRIS ALT2 TSL 5 BASIC23.87■■□□□ 1.41
Pcdh18Q8VHR0 Sec63-201ENSMUST00000019937 6032 ntAPPRIS P1 TSL 1 (best) BASIC23.87■■□□□ 1.41
Pcdh18Q8VHR0 Ttc19-202ENSMUST00000101075 2193 ntAPPRIS ALT2 TSL 1 (best) BASIC23.87■■□□□ 1.41
Pcdh18Q8VHR0 Gsk3a-202ENSMUST00000108411 2248 ntAPPRIS ALT2 TSL 5 BASIC23.87■■□□□ 1.41
Pcdh18Q8VHR0 Mypop-203ENSMUST00000131087 1951 ntAPPRIS P1 TSL 5 BASIC23.87■■□□□ 1.41
Pcdh18Q8VHR0 Galnt10-202ENSMUST00000108846 1745 ntTSL 1 (best) BASIC23.86■■□□□ 1.41
Pcdh18Q8VHR0 Dyrk1a-202ENSMUST00000119878 5759 ntAPPRIS P1 TSL 5 BASIC23.85■■□□□ 1.41
Pcdh18Q8VHR0 Ildr2-205ENSMUST00000193860 2320 ntTSL 1 (best) BASIC23.84■■□□□ 1.41
Pcdh18Q8VHR0 Prelid3b-201ENSMUST00000016401 1553 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
Pcdh18Q8VHR0 Dapk3-209ENSMUST00000219850 1482 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
Pcdh18Q8VHR0 Pax1-201ENSMUST00000109968 2643 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.41
Pcdh18Q8VHR0 Hdgf-201ENSMUST00000005017 2245 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.4
Pcdh18Q8VHR0 Pfn2-202ENSMUST00000119344 1879 ntTSL 1 (best) BASIC23.82■■□□□ 1.4
Pcdh18Q8VHR0 Klhl25-205ENSMUST00000206019 2299 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
Pcdh18Q8VHR0 Cenpv-201ENSMUST00000018653 1032 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
Pcdh18Q8VHR0 Raly-204ENSMUST00000116389 1759 ntAPPRIS ALT2 TSL 5 BASIC23.8■■□□□ 1.4
Pcdh18Q8VHR0 Gm12184-201ENSMUST00000104959 1310 ntAPPRIS P1 BASIC23.8■■□□□ 1.4
Pcdh18Q8VHR0 Mapk3-202ENSMUST00000057669 1800 ntAPPRIS P2 TSL 1 (best) BASIC23.79■■□□□ 1.4
Pcdh18Q8VHR0 Tspan3-201ENSMUST00000034876 1716 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
Pcdh18Q8VHR0 Gtpbp2-201ENSMUST00000024748 2966 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
Pcdh18Q8VHR0 Gm26115-201ENSMUST00000175605 87 ntBASIC23.76■■□□□ 1.39
Pcdh18Q8VHR0 Lactb-201ENSMUST00000034929 2031 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
Pcdh18Q8VHR0 Ica1-201ENSMUST00000038403 2075 ntAPPRIS P2 TSL 1 (best) BASIC23.75■■□□□ 1.39
Pcdh18Q8VHR0 Tgfbr1-205ENSMUST00000126171 1829 ntTSL 5 BASIC23.75■■□□□ 1.39
Pcdh18Q8VHR0 Gas2l1-201ENSMUST00000037146 2686 ntAPPRIS ALT2 TSL 1 (best) BASIC23.75■■□□□ 1.39
Pcdh18Q8VHR0 Tnfsfm13-202ENSMUST00000174159 1470 ntAPPRIS ALT2 TSL 2 BASIC23.75■■□□□ 1.39
Pcdh18Q8VHR0 Popdc3-202ENSMUST00000161803 1369 ntTSL 1 (best) BASIC23.74■■□□□ 1.39
Pcdh18Q8VHR0 Ric1-206ENSMUST00000162184 2157 ntTSL 1 (best) BASIC23.74■■□□□ 1.39
Pcdh18Q8VHR0 Slc1a5-201ENSMUST00000108496 2764 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
Pcdh18Q8VHR0 Clk2-203ENSMUST00000121931 2112 ntAPPRIS ALT1 TSL 5 BASIC23.72■■□□□ 1.39
Pcdh18Q8VHR0 Olfm1-203ENSMUST00000102879 1072 ntTSL 1 (best) BASIC23.72■■□□□ 1.39
Pcdh18Q8VHR0 Rnf130-202ENSMUST00000102776 1502 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
Pcdh18Q8VHR0 Ccz1-201ENSMUST00000031621 1769 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
Pcdh18Q8VHR0 Ihh-201ENSMUST00000164097 2468 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
Pcdh18Q8VHR0 Ubp1-203ENSMUST00000116492 2111 ntAPPRIS ALT1 TSL 1 (best) BASIC23.7■■□□□ 1.38
Pcdh18Q8VHR0 Rnf220-212ENSMUST00000221654 1949 ntTSL 1 (best) BASIC23.69■■□□□ 1.38
Pcdh18Q8VHR0 Gm8109-201ENSMUST00000194076 746 ntBASIC23.68■■□□□ 1.38
Pcdh18Q8VHR0 Scrt2-201ENSMUST00000064061 3395 ntAPPRIS P1 TSL 5 BASIC23.67■■□□□ 1.38
Pcdh18Q8VHR0 Irak1-202ENSMUST00000068286 2537 ntAPPRIS P3 TSL 1 (best) BASIC23.67■■□□□ 1.38
Pcdh18Q8VHR0 Tnfsf12-202ENSMUST00000181810 1435 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
Pcdh18Q8VHR0 Slc22a17-201ENSMUST00000050772 2290 ntTSL 1 (best) BASIC23.66■■□□□ 1.38
Pcdh18Q8VHR0 Raly-202ENSMUST00000058089 1747 ntAPPRIS P3 TSL 1 (best) BASIC23.66■■□□□ 1.38
Pcdh18Q8VHR0 Cited2-203ENSMUST00000219558 2411 ntAPPRIS P1 BASIC23.65■■□□□ 1.38
Pcdh18Q8VHR0 Gm15688-201ENSMUST00000161394 2418 ntTSL 1 (best) BASIC23.64■■□□□ 1.38
Pcdh18Q8VHR0 Abhd17a-201ENSMUST00000003436 1468 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
Pcdh18Q8VHR0 Dtnb-203ENSMUST00000164578 2355 ntTSL 1 (best) BASIC23.63■■□□□ 1.37
Pcdh18Q8VHR0 Sh3rf1-201ENSMUST00000034060 5479 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
Pcdh18Q8VHR0 Pfdn2-202ENSMUST00000135941 1735 ntAPPRIS P1 TSL 1 (best) BASIC23.62■■□□□ 1.37
Pcdh18Q8VHR0 Zswim6-201ENSMUST00000105097 5456 ntTSL 5 BASIC23.62■■□□□ 1.37
Pcdh18Q8VHR0 Rhobtb3-202ENSMUST00000109606 1676 ntTSL 1 (best) BASIC23.62■■□□□ 1.37
Pcdh18Q8VHR0 Rcan1-202ENSMUST00000060005 2324 ntTSL 1 (best) BASIC23.62■■□□□ 1.37
Pcdh18Q8VHR0 Crlf1-201ENSMUST00000008032 1644 ntAPPRIS P1 TSL 1 (best) BASIC23.62■■□□□ 1.37
Pcdh18Q8VHR0 E2f1-201ENSMUST00000000894 2755 ntAPPRIS ALT2 TSL 1 (best) BASIC23.62■■□□□ 1.37
Pcdh18Q8VHR0 Fam220a-201ENSMUST00000067145 2198 ntAPPRIS P1 TSL 1 (best) BASIC23.61■■□□□ 1.37
Pcdh18Q8VHR0 Phf10-201ENSMUST00000024657 1663 ntAPPRIS P1 TSL 1 (best) BASIC23.61■■□□□ 1.37
Pcdh18Q8VHR0 Neurog2-201ENSMUST00000029587 2227 ntAPPRIS P1 TSL 1 (best) BASIC23.61■■□□□ 1.37
Pcdh18Q8VHR0 Rnf130-201ENSMUST00000054684 1415 ntTSL 1 (best) BASIC23.59■■□□□ 1.37
Pcdh18Q8VHR0 Spata1-201ENSMUST00000029839 1920 ntAPPRIS P1 TSL 1 (best) BASIC23.59■■□□□ 1.37
Pcdh18Q8VHR0 Grb2-202ENSMUST00000106495 2041 ntTSL 5 BASIC23.59■■□□□ 1.37
Pcdh18Q8VHR0 Dhrs13-203ENSMUST00000122342 1791 ntTSL 1 (best) BASIC23.58■■□□□ 1.37
Pcdh18Q8VHR0 Cd320-201ENSMUST00000002379 2209 ntAPPRIS P3 TSL 1 (best) BASIC23.57■■□□□ 1.36
Pcdh18Q8VHR0 Tcf15-201ENSMUST00000089112 980 ntAPPRIS P1 TSL 1 (best) BASIC23.57■■□□□ 1.36
Pcdh18Q8VHR0 Mkrn1-202ENSMUST00000051671 1511 ntTSL 1 (best) BASIC23.57■■□□□ 1.36
Pcdh18Q8VHR0 Ywhah-201ENSMUST00000019109 1764 ntAPPRIS P1 TSL 1 (best) BASIC23.57■■□□□ 1.36
Pcdh18Q8VHR0 Gm45716-202ENSMUST00000134929 2031 ntAPPRIS P1 TSL 1 (best) BASIC23.57■■□□□ 1.36
Retrieved 100 of 76,532 protein–RNA pairs in 19.5 ms