Protein–RNA interactions for Protein: Q8VCB1

Ndc1, Nucleoporin NDC1, mousemouse

Known RBP Predictions only

Length 673 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ndc1Q8VCB1 Sept11-208ENSMUST00000202308 1792 ntAPPRIS ALT1 TSL 5 BASIC23.91■■□□□ 1.42
Ndc1Q8VCB1 Cdk2ap1-201ENSMUST00000031341 1315 ntAPPRIS P2 TSL 1 (best) BASIC23.89■■□□□ 1.42
Ndc1Q8VCB1 Capns1-201ENSMUST00000001845 1600 ntAPPRIS P2 TSL 5 BASIC23.89■■□□□ 1.42
Ndc1Q8VCB1 BC037032-205ENSMUST00000187080 508 ntTSL 5 BASIC23.87■■□□□ 1.41
Ndc1Q8VCB1 Qrich1-209ENSMUST00000194385 975 ntTSL 2 BASIC23.87■■□□□ 1.41
Ndc1Q8VCB1 Tnfsfm13-201ENSMUST00000108649 1049 ntAPPRIS ALT2 TSL 5 BASIC23.86■■□□□ 1.41
Ndc1Q8VCB1 March2-205ENSMUST00000173015 1418 ntTSL 3 BASIC23.84■■□□□ 1.41
Ndc1Q8VCB1 Bok-205ENSMUST00000201863 883 ntAPPRIS P1 TSL 5 BASIC23.84■■□□□ 1.41
Ndc1Q8VCB1 Mthfd2l-203ENSMUST00000202781 688 ntTSL 1 (best) BASIC23.84■■□□□ 1.41
Ndc1Q8VCB1 C330011M18Rik-201ENSMUST00000071067 1849 ntTSL 1 (best) BASIC23.84■■□□□ 1.41
Ndc1Q8VCB1 Ccz1-201ENSMUST00000031621 1769 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.4
Ndc1Q8VCB1 Sowahd-201ENSMUST00000060057 1574 ntAPPRIS P1 BASIC23.82■■□□□ 1.4
Ndc1Q8VCB1 AC150314.2-201ENSMUST00000214135 834 ntTSL 5 BASIC23.82■■□□□ 1.4
Ndc1Q8VCB1 Nectin3-203ENSMUST00000096052 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC23.81■■□□□ 1.4
Ndc1Q8VCB1 Rnd2-201ENSMUST00000001347 1394 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
Ndc1Q8VCB1 Tmem59-201ENSMUST00000030361 1775 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
Ndc1Q8VCB1 Hnrnpd-202ENSMUST00000072750 1537 ntAPPRIS ALT2 TSL 3 BASIC23.8■■□□□ 1.4
Ndc1Q8VCB1 Ube2m-201ENSMUST00000005714 1472 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
Ndc1Q8VCB1 Smarcc2-205ENSMUST00000218228 603 ntTSL 5 BASIC23.79■■□□□ 1.4
Ndc1Q8VCB1 Ildr2-207ENSMUST00000195557 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC23.78■■□□□ 1.4
Ndc1Q8VCB1 Tmco6-201ENSMUST00000007046 1817 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
Ndc1Q8VCB1 4932443I19Rik-201ENSMUST00000166277 799 ntAPPRIS P2 TSL 1 (best) BASIC23.78■■□□□ 1.4
Ndc1Q8VCB1 Ccdc9-202ENSMUST00000118976 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC23.78■■□□□ 1.4
Ndc1Q8VCB1 6530409C15Rik-202ENSMUST00000143551 1573 ntTSL 1 (best) BASIC23.78■■□□□ 1.4
Ndc1Q8VCB1 Reps1-206ENSMUST00000154718 2402 ntTSL 5 BASIC23.78■■□□□ 1.4
Ndc1Q8VCB1 1810026B05Rik-206ENSMUST00000187421 519 ntTSL 3 BASIC23.77■■□□□ 1.4
Ndc1Q8VCB1 Crip2-201ENSMUST00000084882 1439 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
Ndc1Q8VCB1 C2cd4d-201ENSMUST00000169433 1321 ntAPPRIS P1 TSL 3 BASIC23.76■■□□□ 1.39
Ndc1Q8VCB1 Hrh3-208ENSMUST00000171736 906 ntTSL 5 BASIC23.75■■□□□ 1.39
Ndc1Q8VCB1 Mxra7-202ENSMUST00000047715 757 ntAPPRIS ALT2 TSL 1 (best) BASIC23.75■■□□□ 1.39
Ndc1Q8VCB1 Tgfbr1-205ENSMUST00000126171 1829 ntTSL 5 BASIC23.74■■□□□ 1.39
Ndc1Q8VCB1 Gm527-201ENSMUST00000058135 1468 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
Ndc1Q8VCB1 Gm2415-204ENSMUST00000190235 2004 ntBASIC23.73■■□□□ 1.39
Ndc1Q8VCB1 Fam196a-201ENSMUST00000171394 2490 ntAPPRIS P1 TSL 5 BASIC23.72■■□□□ 1.39
Ndc1Q8VCB1 Junos-204ENSMUST00000128094 830 ntTSL 1 (best) BASIC23.72■■□□□ 1.39
Ndc1Q8VCB1 Tlx1-201ENSMUST00000026236 2065 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
Ndc1Q8VCB1 Hspd1-201ENSMUST00000027123 2423 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
Ndc1Q8VCB1 Ywhaz-204ENSMUST00000110362 2122 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
Ndc1Q8VCB1 Paip1-203ENSMUST00000126957 1731 ntTSL 5 BASIC23.71■■□□□ 1.39
Ndc1Q8VCB1 Fam136a-201ENSMUST00000071492 1643 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.39
Ndc1Q8VCB1 Znrf3-202ENSMUST00000143746 1022 ntTSL 1 (best) BASIC23.7■■□□□ 1.38
Ndc1Q8VCB1 1810026B05Rik-202ENSMUST00000184554 782 ntTSL 3 BASIC23.7■■□□□ 1.38
Ndc1Q8VCB1 Dut-202ENSMUST00000082122 1020 ntTSL 1 (best) BASIC23.7■■□□□ 1.38
Ndc1Q8VCB1 Gm5814-201ENSMUST00000177586 378 ntAPPRIS P1 BASIC23.69■■□□□ 1.38
Ndc1Q8VCB1 C1qtnf5-201ENSMUST00000114815 1215 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
Ndc1Q8VCB1 Stard3nl-210ENSMUST00000222869 1030 ntTSL 5 BASIC23.68■■□□□ 1.38
Ndc1Q8VCB1 Macrod1-201ENSMUST00000040261 1274 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
Ndc1Q8VCB1 Reep6-203ENSMUST00000105355 2127 ntAPPRIS ALT2 TSL 1 (best) BASIC23.68■■□□□ 1.38
Ndc1Q8VCB1 Reep6-204ENSMUST00000105357 2127 ntTSL 1 (best) BASIC23.68■■□□□ 1.38
Ndc1Q8VCB1 Plpp2-201ENSMUST00000063879 1654 ntAPPRIS P3 TSL 1 (best) BASIC23.67■■□□□ 1.38
Ndc1Q8VCB1 Gm20503-201ENSMUST00000174664 1294 ntAPPRIS P1 TSL 5 BASIC23.67■■□□□ 1.38
Ndc1Q8VCB1 Fbll1-201ENSMUST00000160726 1503 ntAPPRIS P1 BASIC23.67■■□□□ 1.38
Ndc1Q8VCB1 Phlda1-201ENSMUST00000164773 1949 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
Ndc1Q8VCB1 Gm7334-201ENSMUST00000061681 1356 ntAPPRIS P1 BASIC23.66■■□□□ 1.38
Ndc1Q8VCB1 Gng13-201ENSMUST00000115108 347 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
Ndc1Q8VCB1 Gm24970-201ENSMUST00000175582 82 ntBASIC23.66■■□□□ 1.38
Ndc1Q8VCB1 Ppp1r14b-201ENSMUST00000070850 919 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
Ndc1Q8VCB1 Tspan3-201ENSMUST00000034876 1716 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
Ndc1Q8VCB1 Iffo2-203ENSMUST00000174078 5716 ntAPPRIS ALT2 TSL 1 (best) BASIC23.64■■□□□ 1.37
Ndc1Q8VCB1 Tmem243-201ENSMUST00000115365 1040 ntAPPRIS P1 TSL 2 BASIC23.64■■□□□ 1.37
Ndc1Q8VCB1 Spg7-201ENSMUST00000108868 845 ntTSL 2 BASIC23.62■■□□□ 1.37
Ndc1Q8VCB1 Raly-202ENSMUST00000058089 1747 ntAPPRIS P3 TSL 1 (best) BASIC23.62■■□□□ 1.37
Ndc1Q8VCB1 Akt1s1-202ENSMUST00000107880 1757 ntAPPRIS P3 TSL 1 (best) BASIC23.61■■□□□ 1.37
Ndc1Q8VCB1 2810459M11Rik-201ENSMUST00000027429 1225 ntAPPRIS ALT2 TSL 1 (best) BASIC23.61■■□□□ 1.37
Ndc1Q8VCB1 AC153504.1-201ENSMUST00000218379 2290 ntBASIC23.6■■□□□ 1.37
Ndc1Q8VCB1 Twist1-201ENSMUST00000049089 1628 ntAPPRIS P1 TSL 1 (best) BASIC23.58■■□□□ 1.36
Ndc1Q8VCB1 Raly-204ENSMUST00000116389 1759 ntAPPRIS ALT2 TSL 5 BASIC23.57■■□□□ 1.36
Ndc1Q8VCB1 Rhobtb3-202ENSMUST00000109606 1676 ntTSL 1 (best) BASIC23.57■■□□□ 1.36
Ndc1Q8VCB1 Gm6658-202ENSMUST00000209493 1885 ntBASIC23.56■■□□□ 1.36
Ndc1Q8VCB1 Tcte2-204ENSMUST00000130033 1462 ntAPPRIS ALT2 TSL 1 (best) BASIC23.56■■□□□ 1.36
Ndc1Q8VCB1 A330023F24Rik-201ENSMUST00000181226 955 ntTSL 1 (best) BASIC23.55■■□□□ 1.36
Ndc1Q8VCB1 Dlx6os2-201ENSMUST00000178206 1354 ntBASIC23.53■■□□□ 1.36
Ndc1Q8VCB1 Ccm2-201ENSMUST00000000388 1858 ntAPPRIS P1 TSL 1 (best) BASIC23.52■■□□□ 1.36
Ndc1Q8VCB1 Srp9-201ENSMUST00000027792 1367 ntAPPRIS P1 TSL 1 (best) BASIC23.52■■□□□ 1.36
Ndc1Q8VCB1 Gm43863-201ENSMUST00000203822 1192 ntBASIC23.5■■□□□ 1.35
Ndc1Q8VCB1 Gm15672-201ENSMUST00000151512 1354 ntTSL 1 (best) BASIC23.5■■□□□ 1.35
Ndc1Q8VCB1 Hmx1-201ENSMUST00000087674 1526 ntAPPRIS P1 TSL 1 (best) BASIC23.49■■□□□ 1.35
Ndc1Q8VCB1 Tsen34-203ENSMUST00000108629 1238 ntTSL 1 (best) BASIC23.49■■□□□ 1.35
Ndc1Q8VCB1 Cetn4-202ENSMUST00000075537 762 ntTSL 3 BASIC23.48■■□□□ 1.35
Ndc1Q8VCB1 Crem-227ENSMUST00000149803 1422 ntTSL 1 (best) BASIC23.48■■□□□ 1.35
Ndc1Q8VCB1 Pitpna-205ENSMUST00000179445 1665 ntAPPRIS ALT1 TSL 5 BASIC23.47■■□□□ 1.35
Ndc1Q8VCB1 Egr3-201ENSMUST00000035908 1509 ntAPPRIS ALT1 TSL 1 (best) BASIC23.45■■□□□ 1.34
Ndc1Q8VCB1 Ywhaq-202ENSMUST00000103002 2110 ntAPPRIS P1 TSL 1 (best) BASIC23.42■■□□□ 1.34
Ndc1Q8VCB1 2310050C09Rik-201ENSMUST00000163439 1078 ntAPPRIS P1 TSL 2 BASIC23.42■■□□□ 1.34
Ndc1Q8VCB1 Ryk-203ENSMUST00000175883 2505 ntAPPRIS P3 TSL 1 (best) BASIC23.42■■□□□ 1.34
Ndc1Q8VCB1 Tpm1-216ENSMUST00000113707 1898 ntTSL 1 (best) BASIC23.42■■□□□ 1.34
Ndc1Q8VCB1 Gnas-207ENSMUST00000109085 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC23.41■■□□□ 1.34
Ndc1Q8VCB1 Gm30346-201ENSMUST00000218641 1699 ntBASIC23.41■■□□□ 1.34
Ndc1Q8VCB1 Pradc1-202ENSMUST00000113770 610 ntTSL 1 (best) BASIC23.4■■□□□ 1.34
Ndc1Q8VCB1 Gm12523-201ENSMUST00000148844 599 ntTSL 5 BASIC23.4■■□□□ 1.34
Ndc1Q8VCB1 Evx2-202ENSMUST00000173623 1428 ntAPPRIS P2 TSL 1 (best) BASIC23.4■■□□□ 1.34
Ndc1Q8VCB1 Rab7-204ENSMUST00000113598 2031 ntAPPRIS P1 TSL 1 (best) BASIC23.39■■□□□ 1.34
Ndc1Q8VCB1 A530058N18Rik-204ENSMUST00000141209 709 ntTSL 5 BASIC23.39■■□□□ 1.33
Ndc1Q8VCB1 Dyrk1a-202ENSMUST00000119878 5759 ntAPPRIS P1 TSL 5 BASIC23.39■■□□□ 1.33
Ndc1Q8VCB1 Triobp-206ENSMUST00000130663 1660 ntAPPRIS ALT2 TSL 5 BASIC23.38■■□□□ 1.33
Ndc1Q8VCB1 Ldb1-206ENSMUST00000152946 2108 ntAPPRIS ALT1 TSL 5 BASIC23.38■■□□□ 1.33
Ndc1Q8VCB1 Il3ra-201ENSMUST00000090591 1614 ntAPPRIS P2 TSL 1 (best) BASIC23.37■■□□□ 1.33
Ndc1Q8VCB1 Pfn2-202ENSMUST00000119344 1879 ntTSL 1 (best) BASIC23.37■■□□□ 1.33
Ndc1Q8VCB1 Cib1-201ENSMUST00000065163 1047 ntAPPRIS P1 TSL 1 (best) BASIC23.37■■□□□ 1.33
Ndc1Q8VCB1 Kmt5a-202ENSMUST00000100709 1425 ntTSL 1 (best) BASIC23.36■■□□□ 1.33
Retrieved 100 of 76,532 protein–RNA pairs in 58.8 ms