Protein–RNA interactions for Protein: Q8R1G6

Pdlim2, PDZ and LIM domain protein 2, mousemouse

Predictions only

Length 349 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pdlim2Q8R1G6 Clptm1l-201ENSMUST00000022102 2340 ntAPPRIS P1 TSL 1 (best) BASIC29.78■■■□□ 2.36
Pdlim2Q8R1G6 Lpcat4-201ENSMUST00000028554 2275 ntAPPRIS P1 TSL 1 (best) BASIC29.78■■■□□ 2.36
Pdlim2Q8R1G6 Fcnaos-201ENSMUST00000127642 1351 ntTSL 1 (best) BASIC29.77■■■□□ 2.36
Pdlim2Q8R1G6 Fam220a-204ENSMUST00000119488 2202 ntTSL 1 (best) BASIC29.76■■■□□ 2.36
Pdlim2Q8R1G6 Fam220a-209ENSMUST00000200267 2202 ntAPPRIS P1 TSL 1 (best) BASIC29.76■■■□□ 2.36
Pdlim2Q8R1G6 Rundc3a-204ENSMUST00000107105 1861 ntTSL 1 (best) BASIC29.76■■■□□ 2.35
Pdlim2Q8R1G6 Ube2q2-202ENSMUST00000121677 1680 ntAPPRIS ALT2 TSL 5 BASIC29.75■■■□□ 2.35
Pdlim2Q8R1G6 Tmed7-201ENSMUST00000036030 1436 ntTSL 5 BASIC29.74■■■□□ 2.35
Pdlim2Q8R1G6 Peg12-201ENSMUST00000094339 2640 ntAPPRIS P1 BASIC29.74■■■□□ 2.35
Pdlim2Q8R1G6 Zfp422-201ENSMUST00000057540 2375 ntAPPRIS P1 TSL 1 (best) BASIC29.71■■■□□ 2.35
Pdlim2Q8R1G6 Prelid3b-201ENSMUST00000016401 1553 ntAPPRIS P1 TSL 1 (best) BASIC29.71■■■□□ 2.35
Pdlim2Q8R1G6 Rnf149-201ENSMUST00000062525 2492 ntAPPRIS P1 TSL 1 (best) BASIC29.71■■■□□ 2.35
Pdlim2Q8R1G6 B4galt7-202ENSMUST00000100764 2195 ntTSL 1 (best) BASIC29.7■■■□□ 2.34
Pdlim2Q8R1G6 Ssbp3-203ENSMUST00000097934 1742 ntAPPRIS ALT2 TSL 5 BASIC29.69■■■□□ 2.34
Pdlim2Q8R1G6 Klhl35-201ENSMUST00000037359 1954 ntAPPRIS P1 TSL 1 (best) BASIC29.68■■■□□ 2.34
Pdlim2Q8R1G6 Eed-201ENSMUST00000107234 2067 ntAPPRIS P1 TSL 1 (best) BASIC29.67■■■□□ 2.34
Pdlim2Q8R1G6 Ccz1-201ENSMUST00000031621 1769 ntAPPRIS P1 TSL 1 (best) BASIC29.66■■■□□ 2.34
Pdlim2Q8R1G6 Gas2l1-201ENSMUST00000037146 2686 ntAPPRIS ALT2 TSL 1 (best) BASIC29.66■■■□□ 2.34
Pdlim2Q8R1G6 Otud5-205ENSMUST00000115668 2543 ntTSL 1 (best) BASIC29.65■■■□□ 2.34
Pdlim2Q8R1G6 Lrrc4b-201ENSMUST00000058667 2728 ntAPPRIS P1 TSL 1 (best) BASIC29.63■■■□□ 2.33
Pdlim2Q8R1G6 Gm6345-201ENSMUST00000180378 1691 ntBASIC29.62■■■□□ 2.33
Pdlim2Q8R1G6 Mapk3-202ENSMUST00000057669 1800 ntAPPRIS P2 TSL 1 (best) BASIC29.61■■■□□ 2.33
Pdlim2Q8R1G6 Susd4-202ENSMUST00000153348 1898 ntAPPRIS P1 TSL 5 BASIC29.61■■■□□ 2.33
Pdlim2Q8R1G6 Nhlrc1-201ENSMUST00000052747 2294 ntAPPRIS P1 BASIC29.59■■■□□ 2.33
Pdlim2Q8R1G6 Gm15688-201ENSMUST00000161394 2418 ntTSL 1 (best) BASIC29.58■■■□□ 2.33
Pdlim2Q8R1G6 Cacng8-201ENSMUST00000092351 1380 ntAPPRIS P1 TSL 1 (best) BASIC29.58■■■□□ 2.33
Pdlim2Q8R1G6 Eya2-202ENSMUST00000088132 2447 ntAPPRIS P1 TSL 1 (best) BASIC29.57■■■□□ 2.32
Pdlim2Q8R1G6 Acvr2b-202ENSMUST00000165044 2093 ntTSL 2 BASIC29.57■■■□□ 2.32
Pdlim2Q8R1G6 Ssbp3-202ENSMUST00000072753 1924 ntTSL 1 (best) BASIC29.57■■■□□ 2.32
Pdlim2Q8R1G6 Slc25a28-201ENSMUST00000046038 1514 ntAPPRIS P1 TSL 1 (best) BASIC29.57■■■□□ 2.32
Pdlim2Q8R1G6 Agap3-206ENSMUST00000212381 1191 ntTSL 5 BASIC29.57■■■□□ 2.32
Pdlim2Q8R1G6 Kcnq5-206ENSMUST00000173404 2775 ntAPPRIS ALT2 TSL 5 BASIC29.57■■■□□ 2.32
Pdlim2Q8R1G6 Dtnb-211ENSMUST00000173240 2218 ntTSL 5 BASIC29.56■■■□□ 2.32
Pdlim2Q8R1G6 Raly-202ENSMUST00000058089 1747 ntAPPRIS P3 TSL 1 (best) BASIC29.55■■■□□ 2.32
Pdlim2Q8R1G6 Tgfbr1-205ENSMUST00000126171 1829 ntTSL 5 BASIC29.55■■■□□ 2.32
Pdlim2Q8R1G6 Tm6sf1-201ENSMUST00000041890 2226 ntAPPRIS P1 TSL 1 (best) BASIC29.53■■■□□ 2.32
Pdlim2Q8R1G6 Mypop-201ENSMUST00000059331 2173 ntAPPRIS P1 TSL 5 BASIC29.5■■■□□ 2.31
Pdlim2Q8R1G6 Bod1-201ENSMUST00000058060 1394 ntAPPRIS P1 TSL 1 (best) BASIC29.5■■■□□ 2.31
Pdlim2Q8R1G6 Clk2-201ENSMUST00000090927 2128 ntAPPRIS ALT1 TSL 1 (best) BASIC29.5■■■□□ 2.31
Pdlim2Q8R1G6 Crlf1-201ENSMUST00000008032 1644 ntAPPRIS P1 TSL 1 (best) BASIC29.49■■■□□ 2.31
Pdlim2Q8R1G6 Isoc1-201ENSMUST00000025503 2563 ntAPPRIS P1 TSL 1 (best) BASIC29.49■■■□□ 2.31
Pdlim2Q8R1G6 Runx3-202ENSMUST00000119564 1855 ntAPPRIS ALT2 TSL 1 (best) BASIC29.48■■■□□ 2.31
Pdlim2Q8R1G6 St7-202ENSMUST00000052113 2046 ntAPPRIS P1 TSL 1 (best) BASIC29.47■■■□□ 2.31
Pdlim2Q8R1G6 Slc39a13-201ENSMUST00000073575 2469 ntAPPRIS P1 TSL 1 (best) BASIC29.47■■■□□ 2.31
Pdlim2Q8R1G6 Smarcc1-203ENSMUST00000197480 1949 ntTSL 1 (best) BASIC29.46■■■□□ 2.31
Pdlim2Q8R1G6 Mpp6-209ENSMUST00000204545 2418 ntAPPRIS P1 TSL 5 BASIC29.45■■■□□ 2.31
Pdlim2Q8R1G6 Rras2-201ENSMUST00000069449 2275 ntAPPRIS P1 TSL 1 (best) BASIC29.45■■■□□ 2.31
Pdlim2Q8R1G6 Nans-201ENSMUST00000030018 2179 ntAPPRIS P1 TSL 1 (best) BASIC29.44■■■□□ 2.3
Pdlim2Q8R1G6 Slc22a17-201ENSMUST00000050772 2290 ntTSL 1 (best) BASIC29.43■■■□□ 2.3
Pdlim2Q8R1G6 Phf23-205ENSMUST00000135814 2214 ntTSL 1 (best) BASIC29.41■■■□□ 2.3
Pdlim2Q8R1G6 Dpf1-204ENSMUST00000108231 2040 ntTSL 5 BASIC29.39■■■□□ 2.3
Pdlim2Q8R1G6 Tmem260-208ENSMUST00000226400 2281 ntAPPRIS ALT2 BASIC29.39■■■□□ 2.3
Pdlim2Q8R1G6 Gjc1-201ENSMUST00000068933 1903 ntAPPRIS P1 TSL 1 (best) BASIC29.39■■■□□ 2.3
Pdlim2Q8R1G6 Cd320-201ENSMUST00000002379 2209 ntAPPRIS P3 TSL 1 (best) BASIC29.38■■■□□ 2.29
Pdlim2Q8R1G6 Fus-201ENSMUST00000077609 1831 ntAPPRIS ALT2 TSL 1 (best) BASIC29.36■■■□□ 2.29
Pdlim2Q8R1G6 Ei24-202ENSMUST00000163192 2309 ntAPPRIS P1 TSL 1 (best) BASIC29.36■■■□□ 2.29
Pdlim2Q8R1G6 Mnx1-201ENSMUST00000001608 2018 ntAPPRIS ALT2 TSL 5 BASIC29.35■■■□□ 2.29
Pdlim2Q8R1G6 Cdkn2c-202ENSMUST00000097921 2471 ntAPPRIS P1 TSL 1 (best) BASIC29.35■■■□□ 2.29
Pdlim2Q8R1G6 Agap3-201ENSMUST00000024123 3207 ntAPPRIS P1 TSL 1 (best) BASIC29.35■■■□□ 2.29
Pdlim2Q8R1G6 Mfsd5-201ENSMUST00000051341 1742 ntAPPRIS P1 TSL 1 (best) BASIC29.32■■■□□ 2.28
Pdlim2Q8R1G6 Efemp2-201ENSMUST00000070118 1781 ntTSL 1 (best) BASIC29.31■■■□□ 2.28
Pdlim2Q8R1G6 Cpe-201ENSMUST00000048967 2117 ntAPPRIS P1 TSL 1 (best) BASIC29.29■■■□□ 2.28
Pdlim2Q8R1G6 St3gal2-202ENSMUST00000117534 2177 ntTSL 1 (best) BASIC29.29■■■□□ 2.28
Pdlim2Q8R1G6 Fzd9-201ENSMUST00000062572 2293 ntAPPRIS P1 BASIC29.28■■■□□ 2.28
Pdlim2Q8R1G6 Hnrnpd-203ENSMUST00000112939 1670 ntAPPRIS ALT2 TSL 5 BASIC29.28■■■□□ 2.28
Pdlim2Q8R1G6 Gm17494-201ENSMUST00000072769 1800 ntTSL 1 (best) BASIC29.27■■■□□ 2.28
Pdlim2Q8R1G6 Syndig1l-201ENSMUST00000095550 2524 ntAPPRIS P1 TSL 1 (best) BASIC29.27■■■□□ 2.28
Pdlim2Q8R1G6 Shf-201ENSMUST00000048635 1431 ntAPPRIS P2 TSL 1 (best) BASIC29.26■■■□□ 2.27
Pdlim2Q8R1G6 Tnfsfm13-203ENSMUST00000180587 2235 ntAPPRIS P3 TSL 2 BASIC29.25■■■□□ 2.27
Pdlim2Q8R1G6 Aspscr1-201ENSMUST00000026135 1820 ntAPPRIS P1 TSL 1 (best) BASIC29.25■■■□□ 2.27
Pdlim2Q8R1G6 Nisch-222ENSMUST00000172142 2780 ntAPPRIS ALT2 TSL 1 (best) BASIC29.24■■■□□ 2.27
Pdlim2Q8R1G6 Cdr2-201ENSMUST00000033169 2525 ntAPPRIS P1 TSL 1 (best) BASIC29.24■■■□□ 2.27
Pdlim2Q8R1G6 Dazap1-201ENSMUST00000092305 1994 ntAPPRIS ALT1 TSL 1 (best) BASIC29.23■■■□□ 2.27
Pdlim2Q8R1G6 Guf1-201ENSMUST00000031113 1769 ntTSL 1 (best) BASIC29.22■■■□□ 2.27
Pdlim2Q8R1G6 Hexdc-201ENSMUST00000038831 2378 ntAPPRIS ALT2 TSL 5 BASIC29.21■■■□□ 2.27
Pdlim2Q8R1G6 Rnf115-201ENSMUST00000029740 2209 ntAPPRIS P1 TSL 1 (best) BASIC29.21■■■□□ 2.27
Pdlim2Q8R1G6 Fam220a-201ENSMUST00000067145 2198 ntAPPRIS P1 TSL 1 (best) BASIC29.2■■■□□ 2.26
Pdlim2Q8R1G6 Sox3-201ENSMUST00000135107 2065 ntAPPRIS P1 BASIC29.18■■■□□ 2.26
Pdlim2Q8R1G6 Gnas-207ENSMUST00000109085 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC29.17■■■□□ 2.26
Pdlim2Q8R1G6 5031425E22Rik-201ENSMUST00000101522 2110 ntBASIC29.14■■■□□ 2.26
Pdlim2Q8R1G6 Osbpl10-207ENSMUST00000183104 2477 ntAPPRIS P1 TSL 5 BASIC29.14■■■□□ 2.25
Pdlim2Q8R1G6 Cdc14b-207ENSMUST00000221634 1953 ntAPPRIS ALT2 TSL 1 (best) BASIC29.12■■■□□ 2.25
Pdlim2Q8R1G6 Kcnc3-206ENSMUST00000208651 2728 ntAPPRIS ALT2 TSL 5 BASIC29.11■■■□□ 2.25
Pdlim2Q8R1G6 Foxn3-209ENSMUST00000177451 2882 ntAPPRIS P1 TSL 1 (best) BASIC29.1■■■□□ 2.25
Pdlim2Q8R1G6 Plpp2-201ENSMUST00000063879 1654 ntAPPRIS P3 TSL 1 (best) BASIC29.1■■■□□ 2.25
Pdlim2Q8R1G6 Tbx1-201ENSMUST00000009241 1777 ntAPPRIS P1 TSL 1 (best) BASIC29.1■■■□□ 2.25
Pdlim2Q8R1G6 Zfp358-201ENSMUST00000061508 1999 ntAPPRIS P1 TSL 1 (best) BASIC29.09■■■□□ 2.25
Pdlim2Q8R1G6 Tnfsfm13-202ENSMUST00000174159 1470 ntAPPRIS ALT2 TSL 2 BASIC29.09■■■□□ 2.25
Pdlim2Q8R1G6 Dnpep-201ENSMUST00000066668 2488 ntAPPRIS P3 TSL 1 (best) BASIC29.08■■■□□ 2.25
Pdlim2Q8R1G6 Spata1-201ENSMUST00000029839 1920 ntAPPRIS P1 TSL 1 (best) BASIC29.06■■■□□ 2.24
Pdlim2Q8R1G6 Mipep-204ENSMUST00000225043 1548 ntBASIC29.06■■■□□ 2.24
Pdlim2Q8R1G6 Rtn4r-201ENSMUST00000059589 1938 ntAPPRIS P1 TSL 1 (best) BASIC29.05■■■□□ 2.24
Pdlim2Q8R1G6 Efcc1-202ENSMUST00000159570 2293 ntAPPRIS P2 TSL 5 BASIC29.04■■■□□ 2.24
Pdlim2Q8R1G6 Rexo2-201ENSMUST00000034524 1077 ntAPPRIS P1 TSL 1 (best) BASIC29.04■■■□□ 2.24
Pdlim2Q8R1G6 St7-208ENSMUST00000115419 2194 ntTSL 1 (best) BASIC29.03■■■□□ 2.24
Pdlim2Q8R1G6 Mapk1-201ENSMUST00000023462 2390 ntAPPRIS P1 TSL 1 (best) BASIC29.02■■■□□ 2.24
Pdlim2Q8R1G6 Ccsap-201ENSMUST00000034452 2390 ntAPPRIS P1 TSL 1 (best) BASIC29.01■■■□□ 2.23
Pdlim2Q8R1G6 Rnf149-204ENSMUST00000195705 389 ntTSL 3 BASIC29■■■□□ 2.23
Pdlim2Q8R1G6 Galnt12-202ENSMUST00000107744 2077 ntTSL 1 (best) BASIC29■■■□□ 2.23
Pdlim2Q8R1G6 Wdr34-201ENSMUST00000113711 1814 ntAPPRIS P1 TSL 1 (best) BASIC28.99■■■□□ 2.23
Retrieved 100 of 76,532 protein–RNA pairs in 39.8 ms