Protein–RNA interactions for Protein: Q8K4Z5

Sf3a1, Splicing factor 3A subunit 1, mousemouse

Known RBP Predictions only

Length 791 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sf3a1Q8K4Z5 Fam60a-203ENSMUST00000111562 906 ntAPPRIS P1 TSL 3 BASIC31.17■■■□□ 2.58
Sf3a1Q8K4Z5 Phf10-201ENSMUST00000024657 1663 ntAPPRIS P1 TSL 1 (best) BASIC31.16■■■□□ 2.58
Sf3a1Q8K4Z5 Bok-205ENSMUST00000201863 883 ntAPPRIS P1 TSL 5 BASIC31.16■■■□□ 2.58
Sf3a1Q8K4Z5 Zfp131-205ENSMUST00000223812 663 ntBASIC31.14■■■□□ 2.58
Sf3a1Q8K4Z5 Fcnaos-201ENSMUST00000127642 1351 ntTSL 1 (best) BASIC31.14■■■□□ 2.58
Sf3a1Q8K4Z5 Cyp26a1-201ENSMUST00000025946 1773 ntAPPRIS P1 TSL 1 (best) BASIC31.12■■■□□ 2.57
Sf3a1Q8K4Z5 Akt1s1-202ENSMUST00000107880 1757 ntAPPRIS P3 TSL 1 (best) BASIC31.11■■■□□ 2.57
Sf3a1Q8K4Z5 Ccdc122-202ENSMUST00000095625 1195 ntAPPRIS ALT2 TSL 1 (best) BASIC31.11■■■□□ 2.57
Sf3a1Q8K4Z5 Macrod2-205ENSMUST00000110063 845 ntTSL 5 BASIC31.1■■■□□ 2.57
Sf3a1Q8K4Z5 Phlda1-201ENSMUST00000164773 1949 ntAPPRIS P1 TSL 1 (best) BASIC31.1■■■□□ 2.57
Sf3a1Q8K4Z5 Gnas-207ENSMUST00000109085 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC31.08■■■□□ 2.57
Sf3a1Q8K4Z5 Mtch1-201ENSMUST00000095427 1922 ntAPPRIS P3 TSL 1 (best) BASIC31.07■■■□□ 2.56
Sf3a1Q8K4Z5 Tmeff1-202ENSMUST00000123476 1224 ntAPPRIS P1 TSL 1 (best) BASIC31.07■■■□□ 2.56
Sf3a1Q8K4Z5 Ldb1-206ENSMUST00000152946 2108 ntAPPRIS ALT1 TSL 5 BASIC31.07■■■□□ 2.56
Sf3a1Q8K4Z5 Ring1-201ENSMUST00000025183 2034 ntAPPRIS P1 TSL 1 (best) BASIC31.07■■■□□ 2.56
Sf3a1Q8K4Z5 CT030161.2-201ENSMUST00000218666 735 ntTSL 3 BASIC31.04■■■□□ 2.56
Sf3a1Q8K4Z5 Gm10762-201ENSMUST00000099385 1133 ntAPPRIS P1 BASIC31.04■■■□□ 2.56
Sf3a1Q8K4Z5 Gm7334-201ENSMUST00000061681 1356 ntAPPRIS P1 BASIC31.04■■■□□ 2.56
Sf3a1Q8K4Z5 Cds2-203ENSMUST00000110158 1247 ntTSL 1 (best) BASIC31.03■■■□□ 2.56
Sf3a1Q8K4Z5 Hoxa13-201ENSMUST00000047993 1309 ntAPPRIS ALT2 TSL 5 BASIC31.02■■■□□ 2.56
Sf3a1Q8K4Z5 Aard-201ENSMUST00000090025 1348 ntAPPRIS P1 TSL 1 (best) BASIC31.02■■■□□ 2.56
Sf3a1Q8K4Z5 Cnot6l-203ENSMUST00000122003 2089 ntTSL 1 (best) BASIC31.02■■■□□ 2.56
Sf3a1Q8K4Z5 Gm5814-201ENSMUST00000177586 378 ntAPPRIS P1 BASIC31■■■□□ 2.55
Sf3a1Q8K4Z5 Pard6a-205ENSMUST00000212430 1261 ntAPPRIS ALT1 TSL 1 (best) BASIC31■■■□□ 2.55
Sf3a1Q8K4Z5 Gm45716-202ENSMUST00000134929 2031 ntAPPRIS P1 TSL 1 (best) BASIC31■■■□□ 2.55
Sf3a1Q8K4Z5 Eif2ak3-204ENSMUST00000162950 927 ntTSL 1 (best) BASIC30.99■■■□□ 2.55
Sf3a1Q8K4Z5 C530008M17Rik-201ENSMUST00000086909 1844 ntBASIC30.98■■■□□ 2.55
Sf3a1Q8K4Z5 A530058N18Rik-207ENSMUST00000152254 1211 ntTSL 1 (best) BASIC30.98■■■□□ 2.55
Sf3a1Q8K4Z5 Smad7-202ENSMUST00000168918 1882 ntAPPRIS P1 TSL 1 (best) BASIC30.97■■■□□ 2.55
Sf3a1Q8K4Z5 Gm30346-201ENSMUST00000218641 1699 ntBASIC30.97■■■□□ 2.55
Sf3a1Q8K4Z5 Noxo1-201ENSMUST00000019464 2238 ntAPPRIS P1 TSL 1 (best) BASIC30.96■■■□□ 2.55
Sf3a1Q8K4Z5 Ap1ar-210ENSMUST00000200409 2580 ntTSL 5 BASIC30.96■■■□□ 2.55
Sf3a1Q8K4Z5 Sowahd-201ENSMUST00000060057 1574 ntAPPRIS P1 BASIC30.96■■■□□ 2.55
Sf3a1Q8K4Z5 Ywhah-201ENSMUST00000019109 1764 ntAPPRIS P1 TSL 1 (best) BASIC30.95■■■□□ 2.55
Sf3a1Q8K4Z5 6530409C15Rik-202ENSMUST00000143551 1573 ntTSL 1 (best) BASIC30.95■■■□□ 2.54
Sf3a1Q8K4Z5 1700069B07Rik-202ENSMUST00000191155 939 ntBASIC30.94■■■□□ 2.54
Sf3a1Q8K4Z5 Hoxa13-203ENSMUST00000147595 2395 ntAPPRIS P5 TSL 5 BASIC30.91■■■□□ 2.54
Sf3a1Q8K4Z5 Hmx1-201ENSMUST00000087674 1526 ntAPPRIS P1 TSL 1 (best) BASIC30.91■■■□□ 2.54
Sf3a1Q8K4Z5 Eif4e2-203ENSMUST00000113230 1569 ntTSL 1 (best) BASIC30.9■■■□□ 2.54
Sf3a1Q8K4Z5 Rnd2-201ENSMUST00000001347 1394 ntAPPRIS P1 TSL 1 (best) BASIC30.9■■■□□ 2.54
Sf3a1Q8K4Z5 Gltp-203ENSMUST00000112214 944 ntTSL 3 BASIC30.89■■■□□ 2.54
Sf3a1Q8K4Z5 Gjc1-201ENSMUST00000068933 1903 ntAPPRIS P1 TSL 1 (best) BASIC30.88■■■□□ 2.53
Sf3a1Q8K4Z5 Cebpb-201ENSMUST00000070642 1504 ntAPPRIS P1 BASIC30.86■■■□□ 2.53
Sf3a1Q8K4Z5 Slc16a6-203ENSMUST00000070872 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC30.85■■■□□ 2.53
Sf3a1Q8K4Z5 1700016A09Rik-201ENSMUST00000192004 835 ntBASIC30.85■■■□□ 2.53
Sf3a1Q8K4Z5 Apcdd1-202ENSMUST00000163716 1888 ntAPPRIS P1 TSL 1 (best) BASIC30.83■■■□□ 2.53
Sf3a1Q8K4Z5 Macrod1-201ENSMUST00000040261 1274 ntAPPRIS P1 TSL 1 (best) BASIC30.83■■■□□ 2.53
Sf3a1Q8K4Z5 Ywhaq-202ENSMUST00000103002 2110 ntAPPRIS P1 TSL 1 (best) BASIC30.82■■■□□ 2.52
Sf3a1Q8K4Z5 Ebag9-203ENSMUST00000227691 1945 ntAPPRIS P1 BASIC30.8■■■□□ 2.52
Sf3a1Q8K4Z5 AC153504.1-201ENSMUST00000218379 2290 ntBASIC30.79■■■□□ 2.52
Sf3a1Q8K4Z5 Mrps7-201ENSMUST00000058109 1962 ntAPPRIS P1 TSL 1 (best) BASIC30.79■■■□□ 2.52
Sf3a1Q8K4Z5 Dmwd-201ENSMUST00000032570 2494 ntAPPRIS P2 TSL 1 (best) BASIC30.78■■■□□ 2.52
Sf3a1Q8K4Z5 Fbxo6-201ENSMUST00000030858 1346 ntAPPRIS P1 TSL 1 (best) BASIC30.76■■■□□ 2.52
Sf3a1Q8K4Z5 Znrf3-202ENSMUST00000143746 1022 ntTSL 1 (best) BASIC30.76■■■□□ 2.51
Sf3a1Q8K4Z5 Tdp2-203ENSMUST00000223804 1136 ntBASIC30.75■■■□□ 2.51
Sf3a1Q8K4Z5 Reps1-206ENSMUST00000154718 2402 ntTSL 5 BASIC30.74■■■□□ 2.51
Sf3a1Q8K4Z5 Pitpna-205ENSMUST00000179445 1665 ntAPPRIS ALT1 TSL 5 BASIC30.74■■■□□ 2.51
Sf3a1Q8K4Z5 Tcte2-204ENSMUST00000130033 1462 ntAPPRIS ALT2 TSL 1 (best) BASIC30.73■■■□□ 2.51
Sf3a1Q8K4Z5 Dedd-201ENSMUST00000064950 1618 ntAPPRIS P1 TSL 1 (best) BASIC30.73■■■□□ 2.51
Sf3a1Q8K4Z5 Ccdc9-202ENSMUST00000118976 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC30.72■■■□□ 2.51
Sf3a1Q8K4Z5 Ric1-206ENSMUST00000162184 2157 ntTSL 1 (best) BASIC30.72■■■□□ 2.51
Sf3a1Q8K4Z5 Gm527-201ENSMUST00000058135 1468 ntAPPRIS P1 TSL 1 (best) BASIC30.72■■■□□ 2.51
Sf3a1Q8K4Z5 Runx3-202ENSMUST00000119564 1855 ntAPPRIS ALT2 TSL 1 (best) BASIC30.71■■■□□ 2.51
Sf3a1Q8K4Z5 Ywhaz-204ENSMUST00000110362 2122 ntAPPRIS P1 TSL 1 (best) BASIC30.71■■■□□ 2.51
Sf3a1Q8K4Z5 Tpst1-201ENSMUST00000040721 2050 ntAPPRIS P1 TSL 1 (best) BASIC30.69■■■□□ 2.5
Sf3a1Q8K4Z5 Mfsd5-201ENSMUST00000051341 1742 ntAPPRIS P1 TSL 1 (best) BASIC30.69■■■□□ 2.5
Sf3a1Q8K4Z5 Susd4-202ENSMUST00000153348 1898 ntAPPRIS P1 TSL 5 BASIC30.69■■■□□ 2.5
Sf3a1Q8K4Z5 Fam196a-201ENSMUST00000171394 2490 ntAPPRIS P1 TSL 5 BASIC30.69■■■□□ 2.5
Sf3a1Q8K4Z5 Hrh3-208ENSMUST00000171736 906 ntTSL 5 BASIC30.68■■■□□ 2.5
Sf3a1Q8K4Z5 Gm6345-201ENSMUST00000180378 1691 ntBASIC30.67■■■□□ 2.5
Sf3a1Q8K4Z5 Junos-204ENSMUST00000128094 830 ntTSL 1 (best) BASIC30.66■■■□□ 2.5
Sf3a1Q8K4Z5 Dapk3-202ENSMUST00000178422 1730 ntAPPRIS P1 TSL 1 (best) BASIC30.65■■■□□ 2.5
Sf3a1Q8K4Z5 Pradc1-202ENSMUST00000113770 610 ntTSL 1 (best) BASIC30.64■■■□□ 2.5
Sf3a1Q8K4Z5 Triobp-206ENSMUST00000130663 1660 ntAPPRIS ALT2 TSL 5 BASIC30.64■■■□□ 2.5
Sf3a1Q8K4Z5 Galnt10-202ENSMUST00000108846 1745 ntTSL 1 (best) BASIC30.64■■■□□ 2.5
Sf3a1Q8K4Z5 Crem-227ENSMUST00000149803 1422 ntTSL 1 (best) BASIC30.62■■■□□ 2.49
Sf3a1Q8K4Z5 Egr3-201ENSMUST00000035908 1509 ntAPPRIS ALT1 TSL 1 (best) BASIC30.61■■■□□ 2.49
Sf3a1Q8K4Z5 Fam69b-201ENSMUST00000074240 1622 ntAPPRIS P1 TSL 1 (best) BASIC30.61■■■□□ 2.49
Sf3a1Q8K4Z5 March2-205ENSMUST00000173015 1418 ntTSL 3 BASIC30.6■■■□□ 2.49
Sf3a1Q8K4Z5 Traf4-201ENSMUST00000017530 2078 ntAPPRIS P1 TSL 1 (best) BASIC30.59■■■□□ 2.49
Sf3a1Q8K4Z5 Gm15672-201ENSMUST00000151512 1354 ntTSL 1 (best) BASIC30.59■■■□□ 2.49
Sf3a1Q8K4Z5 Gm9397-201ENSMUST00000200125 605 ntBASIC30.58■■■□□ 2.49
Sf3a1Q8K4Z5 Guf1-201ENSMUST00000031113 1769 ntTSL 1 (best) BASIC30.58■■■□□ 2.49
Sf3a1Q8K4Z5 1190005I06Rik-201ENSMUST00000123927 844 ntAPPRIS P2 TSL 1 (best) BASIC30.57■■■□□ 2.48
Sf3a1Q8K4Z5 Pdia5-201ENSMUST00000023550 1808 ntAPPRIS P1 TSL 1 (best) BASIC30.57■■■□□ 2.48
Sf3a1Q8K4Z5 BC037032-205ENSMUST00000187080 508 ntTSL 5 BASIC30.55■■■□□ 2.48
Sf3a1Q8K4Z5 Rheb-201ENSMUST00000030787 1784 ntAPPRIS P1 TSL 1 (best) BASIC30.55■■■□□ 2.48
Sf3a1Q8K4Z5 Capns1-201ENSMUST00000001845 1600 ntAPPRIS P2 TSL 5 BASIC30.53■■■□□ 2.48
Sf3a1Q8K4Z5 Kmt5a-202ENSMUST00000100709 1425 ntTSL 1 (best) BASIC30.53■■■□□ 2.48
Sf3a1Q8K4Z5 Dazap1-203ENSMUST00000105362 2081 ntAPPRIS P3 TSL 1 (best) BASIC30.53■■■□□ 2.48
Sf3a1Q8K4Z5 Rab40c-201ENSMUST00000026826 2466 ntAPPRIS P1 TSL 1 (best) BASIC30.52■■■□□ 2.48
Sf3a1Q8K4Z5 Tbcel-204ENSMUST00000128959 1535 ntAPPRIS P1 TSL 5 BASIC30.52■■■□□ 2.48
Sf3a1Q8K4Z5 Ssbp3-202ENSMUST00000072753 1924 ntTSL 1 (best) BASIC30.51■■■□□ 2.48
Sf3a1Q8K4Z5 Smarcc1-203ENSMUST00000197480 1949 ntTSL 1 (best) BASIC30.51■■■□□ 2.47
Sf3a1Q8K4Z5 Raly-201ENSMUST00000029120 1802 ntAPPRIS ALT2 TSL 5 BASIC30.5■■■□□ 2.47
Sf3a1Q8K4Z5 Qrich1-209ENSMUST00000194385 975 ntTSL 2 BASIC30.48■■■□□ 2.47
Sf3a1Q8K4Z5 Gm45855-201ENSMUST00000212546 880 ntBASIC30.48■■■□□ 2.47
Sf3a1Q8K4Z5 Fkbp8-202ENSMUST00000119353 1720 ntAPPRIS ALT2 TSL 1 (best) BASIC30.47■■■□□ 2.47
Sf3a1Q8K4Z5 Srp9-201ENSMUST00000027792 1367 ntAPPRIS P1 TSL 1 (best) BASIC30.47■■■□□ 2.47
Sf3a1Q8K4Z5 A430072P03Rik-201ENSMUST00000161480 1510 ntTSL 1 (best) BASIC30.45■■■□□ 2.47
Retrieved 100 of 76,532 protein–RNA pairs in 47.9 ms