Protein–RNA interactions for Protein: Q8K4E0

Alms1, Alstrom syndrome protein 1 homolog, mousemouse

Predictions only

Length 3,251 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Alms1Q8K4E0 Eif5a-201ENSMUST00000043419 1437 ntAPPRIS P1 TSL 1 (best) BASIC25.44■■□□□ 1.66
Alms1Q8K4E0 Scx-201ENSMUST00000043089 1136 ntAPPRIS P1 TSL 1 (best) BASIC25.43■■□□□ 1.66
Alms1Q8K4E0 Azin2-201ENSMUST00000030581 2063 ntAPPRIS P1 TSL 1 (best) BASIC25.42■■□□□ 1.66
Alms1Q8K4E0 Hspd1-201ENSMUST00000027123 2423 ntAPPRIS P1 TSL 1 (best) BASIC25.41■■□□□ 1.66
Alms1Q8K4E0 E2f4-201ENSMUST00000015003 1993 ntAPPRIS P1 TSL 1 (best) BASIC25.4■■□□□ 1.66
Alms1Q8K4E0 Uba52-207ENSMUST00000140679 697 ntAPPRIS P1 TSL 2 BASIC25.39■■□□□ 1.66
Alms1Q8K4E0 Spata1-201ENSMUST00000029839 1920 ntAPPRIS P1 TSL 1 (best) BASIC25.39■■□□□ 1.66
Alms1Q8K4E0 Gm527-201ENSMUST00000058135 1468 ntAPPRIS P1 TSL 1 (best) BASIC25.38■■□□□ 1.65
Alms1Q8K4E0 Stard3nl-210ENSMUST00000222869 1030 ntTSL 5 BASIC25.38■■□□□ 1.65
Alms1Q8K4E0 Ldb1-207ENSMUST00000156585 2014 ntTSL 1 (best) BASIC25.37■■□□□ 1.65
Alms1Q8K4E0 Naa20-201ENSMUST00000002805 1172 ntTSL 1 (best) BASIC25.36■■□□□ 1.65
Alms1Q8K4E0 Gm9939-201ENSMUST00000067161 1154 ntBASIC25.36■■□□□ 1.65
Alms1Q8K4E0 Mapk3-202ENSMUST00000057669 1800 ntAPPRIS P2 TSL 1 (best) BASIC25.35■■□□□ 1.65
Alms1Q8K4E0 Mapkapk5-201ENSMUST00000031410 2234 ntAPPRIS P2 TSL 1 (best) BASIC25.35■■□□□ 1.65
Alms1Q8K4E0 Stradb-202ENSMUST00000114296 1348 ntTSL 1 (best) BASIC25.34■■□□□ 1.65
Alms1Q8K4E0 4930542C12Rik-201ENSMUST00000171096 1203 ntBASIC25.33■■□□□ 1.65
Alms1Q8K4E0 Macrod1-201ENSMUST00000040261 1274 ntAPPRIS P1 TSL 1 (best) BASIC25.33■■□□□ 1.65
Alms1Q8K4E0 Twist1-201ENSMUST00000049089 1628 ntAPPRIS P1 TSL 1 (best) BASIC25.3■■□□□ 1.64
Alms1Q8K4E0 Mocs3-201ENSMUST00000099071 1973 ntAPPRIS P1 BASIC25.29■■□□□ 1.64
Alms1Q8K4E0 Junos-204ENSMUST00000128094 830 ntTSL 1 (best) BASIC25.27■■□□□ 1.64
Alms1Q8K4E0 Akt1s1-202ENSMUST00000107880 1757 ntAPPRIS P3 TSL 1 (best) BASIC25.27■■□□□ 1.64
Alms1Q8K4E0 Emx1-201ENSMUST00000045942 1561 ntAPPRIS P1 TSL 1 (best) BASIC25.27■■□□□ 1.64
Alms1Q8K4E0 Ppp2r2d-201ENSMUST00000041097 2081 ntAPPRIS P1 TSL 1 (best) BASIC25.26■■□□□ 1.63
Alms1Q8K4E0 Tmem243-201ENSMUST00000115365 1040 ntAPPRIS P1 TSL 2 BASIC25.25■■□□□ 1.63
Alms1Q8K4E0 E330040D14Rik-201ENSMUST00000192299 1374 ntBASIC25.23■■□□□ 1.63
Alms1Q8K4E0 Tnfsf12-202ENSMUST00000181810 1435 ntAPPRIS P1 TSL 1 (best) BASIC25.23■■□□□ 1.63
Alms1Q8K4E0 Tprgl-201ENSMUST00000030896 1724 ntAPPRIS P1 TSL 1 (best) BASIC25.22■■□□□ 1.63
Alms1Q8K4E0 Rbfox2-201ENSMUST00000048145 1720 ntTSL 1 (best) BASIC25.22■■□□□ 1.63
Alms1Q8K4E0 Ubl4a-207ENSMUST00000178691 1038 ntAPPRIS P1 TSL 2 BASIC25.2■■□□□ 1.62
Alms1Q8K4E0 Lmo2-201ENSMUST00000111139 1434 ntTSL 5 BASIC25.18■■□□□ 1.62
Alms1Q8K4E0 Tcte3-201ENSMUST00000040746 788 ntAPPRIS P1 TSL 1 (best) BASIC25.18■■□□□ 1.62
Alms1Q8K4E0 Tcte3-202ENSMUST00000097398 632 ntTSL 1 (best) BASIC25.18■■□□□ 1.62
Alms1Q8K4E0 6530409C15Rik-202ENSMUST00000143551 1573 ntTSL 1 (best) BASIC25.18■■□□□ 1.62
Alms1Q8K4E0 Rnd2-201ENSMUST00000001347 1394 ntAPPRIS P1 TSL 1 (best) BASIC25.18■■□□□ 1.62
Alms1Q8K4E0 Phlda1-201ENSMUST00000164773 1949 ntAPPRIS P1 TSL 1 (best) BASIC25.17■■□□□ 1.62
Alms1Q8K4E0 Tnfsfm13-202ENSMUST00000174159 1470 ntAPPRIS ALT2 TSL 2 BASIC25.15■■□□□ 1.62
Alms1Q8K4E0 Gm6821-201ENSMUST00000107540 542 ntBASIC25.13■■□□□ 1.61
Alms1Q8K4E0 Bok-205ENSMUST00000201863 883 ntAPPRIS P1 TSL 5 BASIC25.13■■□□□ 1.61
Alms1Q8K4E0 Reep6-203ENSMUST00000105355 2127 ntAPPRIS ALT2 TSL 1 (best) BASIC25.12■■□□□ 1.61
Alms1Q8K4E0 Reep6-204ENSMUST00000105357 2127 ntTSL 1 (best) BASIC25.12■■□□□ 1.61
Alms1Q8K4E0 Ranbp1-202ENSMUST00000115645 1085 ntAPPRIS P1 TSL 1 (best) BASIC25.12■■□□□ 1.61
Alms1Q8K4E0 Hspb1-202ENSMUST00000111155 930 ntTSL 1 (best) BASIC25.11■■□□□ 1.61
Alms1Q8K4E0 A530058N18Rik-204ENSMUST00000141209 709 ntTSL 5 BASIC25.11■■□□□ 1.61
Alms1Q8K4E0 Guk1-204ENSMUST00000170202 1078 ntAPPRIS P1 TSL 1 (best) BASIC25.11■■□□□ 1.61
Alms1Q8K4E0 2310050C09Rik-201ENSMUST00000163439 1078 ntAPPRIS P1 TSL 2 BASIC25.1■■□□□ 1.61
Alms1Q8K4E0 Gkap1-201ENSMUST00000091579 1523 ntAPPRIS P1 TSL 1 (best) BASIC25.1■■□□□ 1.61
Alms1Q8K4E0 Tceal5-201ENSMUST00000066819 1044 ntAPPRIS P1 TSL 1 (best) BASIC25.1■■□□□ 1.61
Alms1Q8K4E0 Sept11-208ENSMUST00000202308 1792 ntAPPRIS ALT1 TSL 5 BASIC25.08■■□□□ 1.61
Alms1Q8K4E0 Ildr2-207ENSMUST00000195557 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC25.08■■□□□ 1.61
Alms1Q8K4E0 Rpia-201ENSMUST00000066134 1829 ntAPPRIS P1 TSL 1 (best) BASIC25.08■■□□□ 1.61
Alms1Q8K4E0 Tbcel-204ENSMUST00000128959 1535 ntAPPRIS P1 TSL 5 BASIC25.08■■□□□ 1.6
Alms1Q8K4E0 Bok-201ENSMUST00000027499 1468 ntAPPRIS P1 TSL 1 (best) BASIC25.07■■□□□ 1.6
Alms1Q8K4E0 Hrh3-208ENSMUST00000171736 906 ntTSL 5 BASIC25.07■■□□□ 1.6
Alms1Q8K4E0 Uba52-205ENSMUST00000129909 705 ntAPPRIS P1 TSL 2 BASIC25.07■■□□□ 1.6
Alms1Q8K4E0 Ube2m-201ENSMUST00000005714 1472 ntAPPRIS P1 TSL 1 (best) BASIC25.07■■□□□ 1.6
Alms1Q8K4E0 Tada2b-202ENSMUST00000119916 1321 ntTSL 5 BASIC25.06■■□□□ 1.6
Alms1Q8K4E0 Tlx1-201ENSMUST00000026236 2065 ntAPPRIS P1 TSL 1 (best) BASIC25.06■■□□□ 1.6
Alms1Q8K4E0 Pwwp2a-202ENSMUST00000094294 1814 ntTSL 5 BASIC25.05■■□□□ 1.6
Alms1Q8K4E0 Gm42809-201ENSMUST00000198429 1138 ntBASIC25.01■■□□□ 1.59
Alms1Q8K4E0 Gltp-201ENSMUST00000012028 1762 ntAPPRIS P1 TSL 1 (best) BASIC24.99■■□□□ 1.59
Alms1Q8K4E0 Ccm2-201ENSMUST00000000388 1858 ntAPPRIS P1 TSL 1 (best) BASIC24.99■■□□□ 1.59
Alms1Q8K4E0 AC157572.2-201ENSMUST00000226970 908 ntBASIC24.97■■□□□ 1.59
Alms1Q8K4E0 Gm15672-201ENSMUST00000151512 1354 ntTSL 1 (best) BASIC24.97■■□□□ 1.59
Alms1Q8K4E0 Ctbp1-206ENSMUST00000201575 2091 ntTSL 1 (best) BASIC24.97■■□□□ 1.59
Alms1Q8K4E0 Prelid3b-201ENSMUST00000016401 1553 ntAPPRIS P1 TSL 1 (best) BASIC24.96■■□□□ 1.59
Alms1Q8K4E0 Cdv3-205ENSMUST00000189896 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC24.95■■□□□ 1.58
Alms1Q8K4E0 Dtnbp1-202ENSMUST00000110128 1305 ntAPPRIS ALT2 TSL 5 BASIC24.94■■□□□ 1.58
Alms1Q8K4E0 Bod1-202ENSMUST00000109415 799 ntAPPRIS P1 TSL 2 BASIC24.94■■□□□ 1.58
Alms1Q8K4E0 Gm43863-201ENSMUST00000203822 1192 ntBASIC24.94■■□□□ 1.58
Alms1Q8K4E0 Anapc11-202ENSMUST00000093140 962 ntAPPRIS P1 TSL 1 (best) BASIC24.94■■□□□ 1.58
Alms1Q8K4E0 Stard10-203ENSMUST00000164479 1375 ntAPPRIS P1 TSL 1 (best) BASIC24.93■■□□□ 1.58
Alms1Q8K4E0 Il3ra-201ENSMUST00000090591 1614 ntAPPRIS P2 TSL 1 (best) BASIC24.92■■□□□ 1.58
Alms1Q8K4E0 Dleu2-206ENSMUST00000182537 318 ntTSL 2 BASIC24.92■■□□□ 1.58
Alms1Q8K4E0 Bckdhb-206ENSMUST00000190637 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC24.91■■□□□ 1.58
Alms1Q8K4E0 Srp9-201ENSMUST00000027792 1367 ntAPPRIS P1 TSL 1 (best) BASIC24.91■■□□□ 1.58
Alms1Q8K4E0 Orai1-202ENSMUST00000121652 1875 ntAPPRIS P1 TSL 1 (best) BASIC24.91■■□□□ 1.58
Alms1Q8K4E0 Fam136a-201ENSMUST00000071492 1643 ntAPPRIS P1 TSL 1 (best) BASIC24.9■■□□□ 1.58
Alms1Q8K4E0 Ywhaq-202ENSMUST00000103002 2110 ntAPPRIS P1 TSL 1 (best) BASIC24.9■■□□□ 1.58
Alms1Q8K4E0 Mon2-207ENSMUST00000219203 1844 ntTSL 1 (best) BASIC24.89■■□□□ 1.57
Alms1Q8K4E0 Gm2415-204ENSMUST00000190235 2004 ntBASIC24.88■■□□□ 1.57
Alms1Q8K4E0 Dazap1-202ENSMUST00000105361 1537 ntAPPRIS ALT1 TSL 1 (best) BASIC24.88■■□□□ 1.57
Alms1Q8K4E0 Gm28592-201ENSMUST00000186844 741 ntTSL 5 BASIC24.87■■□□□ 1.57
Alms1Q8K4E0 Six3-202ENSMUST00000175898 2419 ntAPPRIS P2 TSL 1 (best) BASIC24.87■■□□□ 1.57
Alms1Q8K4E0 Crem-227ENSMUST00000149803 1422 ntTSL 1 (best) BASIC24.86■■□□□ 1.57
Alms1Q8K4E0 Kras-207ENSMUST00000203147 817 ntTSL 5 BASIC24.84■■□□□ 1.57
Alms1Q8K4E0 Hnrnpd-202ENSMUST00000072750 1537 ntAPPRIS ALT2 TSL 3 BASIC24.84■■□□□ 1.57
Alms1Q8K4E0 Tmeff1-201ENSMUST00000030032 2461 ntAPPRIS P1 TSL 1 (best) BASIC24.82■■□□□ 1.56
Alms1Q8K4E0 Raly-203ENSMUST00000109701 1709 ntAPPRIS P3 TSL 1 (best) BASIC24.81■■□□□ 1.56
Alms1Q8K4E0 Gm30346-201ENSMUST00000218641 1699 ntBASIC24.8■■□□□ 1.56
Alms1Q8K4E0 Gm20402-201ENSMUST00000174738 687 ntTSL 3 BASIC24.8■■□□□ 1.56
Alms1Q8K4E0 Hoxd8-201ENSMUST00000019749 2634 ntAPPRIS P3 TSL 1 (best) BASIC24.79■■□□□ 1.56
Alms1Q8K4E0 Znrf3-202ENSMUST00000143746 1022 ntTSL 1 (best) BASIC24.78■■□□□ 1.56
Alms1Q8K4E0 1700084E18Rik-202ENSMUST00000205624 729 ntBASIC24.78■■□□□ 1.56
Alms1Q8K4E0 Kmt5a-202ENSMUST00000100709 1425 ntTSL 1 (best) BASIC24.78■■□□□ 1.56
Alms1Q8K4E0 Ppp4c-211ENSMUST00000206570 1400 ntAPPRIS P1 TSL 1 (best) BASIC24.78■■□□□ 1.56
Alms1Q8K4E0 Eid2-201ENSMUST00000059596 1392 ntAPPRIS P1 BASIC24.77■■□□□ 1.56
Alms1Q8K4E0 Gm11529-201ENSMUST00000153012 639 ntTSL 1 (best) BASIC24.77■■□□□ 1.56
Alms1Q8K4E0 Gm31266-201ENSMUST00000192060 656 ntTSL 5 BASIC24.77■■□□□ 1.56
Alms1Q8K4E0 Ccz1-201ENSMUST00000031621 1769 ntAPPRIS P1 TSL 1 (best) BASIC24.76■■□□□ 1.55
Alms1Q8K4E0 Pard6a-203ENSMUST00000211888 1179 ntTSL 1 (best) BASIC24.75■■□□□ 1.55
Retrieved 100 of 76,532 protein–RNA pairs in 16.6 ms