Protein–RNA interactions for Protein: Q8K2Q9

Shtn1, Shootin-1, mousemouse

Predictions only

Length 631 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shtn1Q8K2Q9 Sowahd-201ENSMUST00000060057 1574 ntAPPRIS P1 BASIC30.71■■■□□ 2.51
Shtn1Q8K2Q9 Ranbp1-202ENSMUST00000115645 1085 ntAPPRIS P1 TSL 1 (best) BASIC30.7■■■□□ 2.51
Shtn1Q8K2Q9 Naa20-201ENSMUST00000002805 1172 ntTSL 1 (best) BASIC30.7■■■□□ 2.51
Shtn1Q8K2Q9 Twist1-201ENSMUST00000049089 1628 ntAPPRIS P1 TSL 1 (best) BASIC30.69■■■□□ 2.5
Shtn1Q8K2Q9 Gm8503-201ENSMUST00000118131 455 ntBASIC30.69■■■□□ 2.5
Shtn1Q8K2Q9 Scx-201ENSMUST00000043089 1136 ntAPPRIS P1 TSL 1 (best) BASIC30.69■■■□□ 2.5
Shtn1Q8K2Q9 Ssbp3-203ENSMUST00000097934 1742 ntAPPRIS ALT2 TSL 5 BASIC30.68■■■□□ 2.5
Shtn1Q8K2Q9 Bok-201ENSMUST00000027499 1468 ntAPPRIS P1 TSL 1 (best) BASIC30.63■■■□□ 2.49
Shtn1Q8K2Q9 Ubl4a-207ENSMUST00000178691 1038 ntAPPRIS P1 TSL 2 BASIC30.6■■■□□ 2.49
Shtn1Q8K2Q9 Gm6821-201ENSMUST00000107540 542 ntBASIC30.59■■■□□ 2.49
Shtn1Q8K2Q9 6530409C15Rik-202ENSMUST00000143551 1573 ntTSL 1 (best) BASIC30.58■■■□□ 2.49
Shtn1Q8K2Q9 Stradb-202ENSMUST00000114296 1348 ntTSL 1 (best) BASIC30.56■■■□□ 2.48
Shtn1Q8K2Q9 Tceal5-201ENSMUST00000066819 1044 ntAPPRIS P1 TSL 1 (best) BASIC30.54■■■□□ 2.48
Shtn1Q8K2Q9 Tcte3-201ENSMUST00000040746 788 ntAPPRIS P1 TSL 1 (best) BASIC30.53■■■□□ 2.48
Shtn1Q8K2Q9 Tcte3-202ENSMUST00000097398 632 ntTSL 1 (best) BASIC30.53■■■□□ 2.48
Shtn1Q8K2Q9 Ube2ql1-201ENSMUST00000065118 2674 ntAPPRIS P1 TSL 1 (best) BASIC30.52■■■□□ 2.48
Shtn1Q8K2Q9 Bok-205ENSMUST00000201863 883 ntAPPRIS P1 TSL 5 BASIC30.52■■■□□ 2.48
Shtn1Q8K2Q9 Gm43863-201ENSMUST00000203822 1192 ntBASIC30.51■■■□□ 2.47
Shtn1Q8K2Q9 Lmo2-201ENSMUST00000111139 1434 ntTSL 5 BASIC30.5■■■□□ 2.47
Shtn1Q8K2Q9 Gkap1-201ENSMUST00000091579 1523 ntAPPRIS P1 TSL 1 (best) BASIC30.5■■■□□ 2.47
Shtn1Q8K2Q9 Tprgl-201ENSMUST00000030896 1724 ntAPPRIS P1 TSL 1 (best) BASIC30.49■■■□□ 2.47
Shtn1Q8K2Q9 Fndc10-201ENSMUST00000099265 2140 ntAPPRIS P1 BASIC30.48■■■□□ 2.47
Shtn1Q8K2Q9 Mocs3-201ENSMUST00000099071 1973 ntAPPRIS P1 BASIC30.47■■■□□ 2.47
Shtn1Q8K2Q9 Tnfsfm13-202ENSMUST00000174159 1470 ntAPPRIS ALT2 TSL 2 BASIC30.47■■■□□ 2.47
Shtn1Q8K2Q9 Wsb2-201ENSMUST00000031309 2421 ntAPPRIS P2 TSL 1 (best) BASIC30.45■■■□□ 2.47
Shtn1Q8K2Q9 Uba52-205ENSMUST00000129909 705 ntAPPRIS P1 TSL 2 BASIC30.45■■■□□ 2.47
Shtn1Q8K2Q9 2310050C09Rik-201ENSMUST00000163439 1078 ntAPPRIS P1 TSL 2 BASIC30.44■■■□□ 2.46
Shtn1Q8K2Q9 Spata1-201ENSMUST00000029839 1920 ntAPPRIS P1 TSL 1 (best) BASIC30.43■■■□□ 2.46
Shtn1Q8K2Q9 Mapk3-202ENSMUST00000057669 1800 ntAPPRIS P2 TSL 1 (best) BASIC30.41■■■□□ 2.46
Shtn1Q8K2Q9 Znrf3-202ENSMUST00000143746 1022 ntTSL 1 (best) BASIC30.41■■■□□ 2.46
Shtn1Q8K2Q9 Dtnbp1-202ENSMUST00000110128 1305 ntAPPRIS ALT2 TSL 5 BASIC30.39■■■□□ 2.46
Shtn1Q8K2Q9 Sept11-208ENSMUST00000202308 1792 ntAPPRIS ALT1 TSL 5 BASIC30.38■■■□□ 2.45
Shtn1Q8K2Q9 Cdv3-205ENSMUST00000189896 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC30.38■■■□□ 2.45
Shtn1Q8K2Q9 A530058N18Rik-204ENSMUST00000141209 709 ntTSL 5 BASIC30.37■■■□□ 2.45
Shtn1Q8K2Q9 Guk1-204ENSMUST00000170202 1078 ntAPPRIS P1 TSL 1 (best) BASIC30.37■■■□□ 2.45
Shtn1Q8K2Q9 Anapc11-202ENSMUST00000093140 962 ntAPPRIS P1 TSL 1 (best) BASIC30.35■■■□□ 2.45
Shtn1Q8K2Q9 Srp9-201ENSMUST00000027792 1367 ntAPPRIS P1 TSL 1 (best) BASIC30.35■■■□□ 2.45
Shtn1Q8K2Q9 Prelid3b-201ENSMUST00000016401 1553 ntAPPRIS P1 TSL 1 (best) BASIC30.3■■■□□ 2.44
Shtn1Q8K2Q9 Dleu2-206ENSMUST00000182537 318 ntTSL 2 BASIC30.3■■■□□ 2.44
Shtn1Q8K2Q9 Ldb1-208ENSMUST00000185355 2088 ntTSL 1 (best) BASIC30.29■■■□□ 2.44
Shtn1Q8K2Q9 Tbcel-204ENSMUST00000128959 1535 ntAPPRIS P1 TSL 5 BASIC30.29■■■□□ 2.44
Shtn1Q8K2Q9 Rbfox2-201ENSMUST00000048145 1720 ntTSL 1 (best) BASIC30.29■■■□□ 2.44
Shtn1Q8K2Q9 Frs3-201ENSMUST00000113296 2144 ntAPPRIS P1 TSL 1 (best) BASIC30.29■■■□□ 2.44
Shtn1Q8K2Q9 Ube2m-201ENSMUST00000005714 1472 ntAPPRIS P1 TSL 1 (best) BASIC30.27■■■□□ 2.44
Shtn1Q8K2Q9 Gm42809-201ENSMUST00000198429 1138 ntBASIC30.27■■■□□ 2.44
Shtn1Q8K2Q9 Kras-207ENSMUST00000203147 817 ntTSL 5 BASIC30.27■■■□□ 2.44
Shtn1Q8K2Q9 Gm15672-201ENSMUST00000151512 1354 ntTSL 1 (best) BASIC30.27■■■□□ 2.44
Shtn1Q8K2Q9 Rpia-201ENSMUST00000066134 1829 ntAPPRIS P1 TSL 1 (best) BASIC30.26■■■□□ 2.43
Shtn1Q8K2Q9 Epcam-201ENSMUST00000053577 2040 ntAPPRIS P1 TSL 5 BASIC30.25■■■□□ 2.43
Shtn1Q8K2Q9 Il3ra-201ENSMUST00000090591 1614 ntAPPRIS P2 TSL 1 (best) BASIC30.25■■■□□ 2.43
Shtn1Q8K2Q9 Azin2-201ENSMUST00000030581 2063 ntAPPRIS P1 TSL 1 (best) BASIC30.24■■■□□ 2.43
Shtn1Q8K2Q9 Gm31266-201ENSMUST00000192060 656 ntTSL 5 BASIC30.23■■■□□ 2.43
Shtn1Q8K2Q9 Phlda1-201ENSMUST00000164773 1949 ntAPPRIS P1 TSL 1 (best) BASIC30.23■■■□□ 2.43
Shtn1Q8K2Q9 Pwwp2a-202ENSMUST00000094294 1814 ntTSL 5 BASIC30.22■■■□□ 2.43
Shtn1Q8K2Q9 Bod1-202ENSMUST00000109415 799 ntAPPRIS P1 TSL 2 BASIC30.22■■■□□ 2.43
Shtn1Q8K2Q9 AC157572.2-201ENSMUST00000226970 908 ntBASIC30.22■■■□□ 2.43
Shtn1Q8K2Q9 Stard10-203ENSMUST00000164479 1375 ntAPPRIS P1 TSL 1 (best) BASIC30.22■■■□□ 2.43
Shtn1Q8K2Q9 Hnrnpd-202ENSMUST00000072750 1537 ntAPPRIS ALT2 TSL 3 BASIC30.22■■■□□ 2.43
Shtn1Q8K2Q9 Tada2b-202ENSMUST00000119916 1321 ntTSL 5 BASIC30.2■■■□□ 2.42
Shtn1Q8K2Q9 E2f4-201ENSMUST00000015003 1993 ntAPPRIS P1 TSL 1 (best) BASIC30.19■■■□□ 2.42
Shtn1Q8K2Q9 Gm11529-201ENSMUST00000153012 639 ntTSL 1 (best) BASIC30.19■■■□□ 2.42
Shtn1Q8K2Q9 Stard3nl-201ENSMUST00000039694 1327 ntAPPRIS P1 TSL 1 (best) BASIC30.19■■■□□ 2.42
Shtn1Q8K2Q9 Hspb1-202ENSMUST00000111155 930 ntTSL 1 (best) BASIC30.18■■■□□ 2.42
Shtn1Q8K2Q9 Fam241a-202ENSMUST00000199273 2234 ntAPPRIS P1 TSL 1 (best) BASIC30.18■■■□□ 2.42
Shtn1Q8K2Q9 Fam136a-201ENSMUST00000071492 1643 ntAPPRIS P1 TSL 1 (best) BASIC30.16■■■□□ 2.42
Shtn1Q8K2Q9 Bckdhb-206ENSMUST00000190637 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC30.15■■■□□ 2.42
Shtn1Q8K2Q9 Eid2-201ENSMUST00000059596 1392 ntAPPRIS P1 BASIC30.14■■■□□ 2.41
Shtn1Q8K2Q9 Ldb1-207ENSMUST00000156585 2014 ntTSL 1 (best) BASIC30.13■■■□□ 2.41
Shtn1Q8K2Q9 Gm7334-201ENSMUST00000061681 1356 ntAPPRIS P1 BASIC30.13■■■□□ 2.41
Shtn1Q8K2Q9 Dazap1-202ENSMUST00000105361 1537 ntAPPRIS ALT1 TSL 1 (best) BASIC30.12■■■□□ 2.41
Shtn1Q8K2Q9 Crem-227ENSMUST00000149803 1422 ntTSL 1 (best) BASIC30.11■■■□□ 2.41
Shtn1Q8K2Q9 Gm20402-201ENSMUST00000174738 687 ntTSL 3 BASIC30.1■■■□□ 2.41
Shtn1Q8K2Q9 Gltp-201ENSMUST00000012028 1762 ntAPPRIS P1 TSL 1 (best) BASIC30.08■■■□□ 2.41
Shtn1Q8K2Q9 Tcte2-204ENSMUST00000130033 1462 ntAPPRIS ALT2 TSL 1 (best) BASIC30.08■■■□□ 2.41
Shtn1Q8K2Q9 Akt1s1-202ENSMUST00000107880 1757 ntAPPRIS P3 TSL 1 (best) BASIC30.07■■■□□ 2.4
Shtn1Q8K2Q9 Tlx1-201ENSMUST00000026236 2065 ntAPPRIS P1 TSL 1 (best) BASIC30.07■■■□□ 2.4
Shtn1Q8K2Q9 Gm5814-201ENSMUST00000177586 378 ntAPPRIS P1 BASIC30.06■■■□□ 2.4
Shtn1Q8K2Q9 1700084E18Rik-202ENSMUST00000205624 729 ntBASIC30.05■■■□□ 2.4
Shtn1Q8K2Q9 1700003F12Rik-202ENSMUST00000109709 704 ntAPPRIS ALT2 TSL 3 BASIC30.04■■■□□ 2.4
Shtn1Q8K2Q9 1700003F12Rik-201ENSMUST00000045116 704 ntAPPRIS P2 TSL 1 (best) BASIC30.04■■■□□ 2.4
Shtn1Q8K2Q9 Egr3-201ENSMUST00000035908 1509 ntAPPRIS ALT1 TSL 1 (best) BASIC30.04■■■□□ 2.4
Shtn1Q8K2Q9 Ppp4c-211ENSMUST00000206570 1400 ntAPPRIS P1 TSL 1 (best) BASIC30.01■■■□□ 2.39
Shtn1Q8K2Q9 Reep6-203ENSMUST00000105355 2127 ntAPPRIS ALT2 TSL 1 (best) BASIC30.01■■■□□ 2.39
Shtn1Q8K2Q9 Reep6-204ENSMUST00000105357 2127 ntTSL 1 (best) BASIC30.01■■■□□ 2.39
Shtn1Q8K2Q9 Paip1-203ENSMUST00000126957 1731 ntTSL 5 BASIC30■■■□□ 2.39
Shtn1Q8K2Q9 Gfra4-203ENSMUST00000110234 600 ntTSL 1 (best) BASIC30■■■□□ 2.39
Shtn1Q8K2Q9 Gfra4-204ENSMUST00000110235 573 ntTSL 1 (best) BASIC30■■■□□ 2.39
Shtn1Q8K2Q9 Glrx2-205ENSMUST00000145571 758 ntTSL 2 BASIC30■■■□□ 2.39
Shtn1Q8K2Q9 Gskip-202ENSMUST00000222284 1064 ntTSL 1 (best) BASIC30■■■□□ 2.39
Shtn1Q8K2Q9 Bckdhb-201ENSMUST00000034801 1472 ntAPPRIS P3 TSL 1 (best) BASIC29.98■■■□□ 2.39
Shtn1Q8K2Q9 Ccz1-201ENSMUST00000031621 1769 ntAPPRIS P1 TSL 1 (best) BASIC29.98■■■□□ 2.39
Shtn1Q8K2Q9 Kmt5a-202ENSMUST00000100709 1425 ntTSL 1 (best) BASIC29.96■■■□□ 2.39
Shtn1Q8K2Q9 Triobp-206ENSMUST00000130663 1660 ntAPPRIS ALT2 TSL 5 BASIC29.95■■■□□ 2.39
Shtn1Q8K2Q9 Nkain2-201ENSMUST00000092602 558 ntBASIC29.95■■■□□ 2.39
Shtn1Q8K2Q9 4930577N17Rik-201ENSMUST00000139771 1625 ntBASIC29.95■■■□□ 2.38
Shtn1Q8K2Q9 Phlda3-201ENSMUST00000038945 1435 ntAPPRIS P1 TSL 1 (best) BASIC29.94■■■□□ 2.38
Shtn1Q8K2Q9 Pitpna-205ENSMUST00000179445 1665 ntAPPRIS ALT1 TSL 5 BASIC29.93■■■□□ 2.38
Shtn1Q8K2Q9 Cops6-202ENSMUST00000110951 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC29.93■■■□□ 2.38
Shtn1Q8K2Q9 Gm28592-201ENSMUST00000186844 741 ntTSL 5 BASIC29.93■■■□□ 2.38
Shtn1Q8K2Q9 Raly-203ENSMUST00000109701 1709 ntAPPRIS P3 TSL 1 (best) BASIC29.92■■■□□ 2.38
Retrieved 100 of 76,532 protein–RNA pairs in 9 ms