Protein–RNA interactions for Protein: Q8K203

Neil3, Endonuclease 8-like 3, mousemouse

Known RBP Predictions only

Length 606 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Neil3Q8K203 Rab2a-201ENSMUST00000060232 2133 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Neil3Q8K203 Mapk3-202ENSMUST00000057669 1800 ntAPPRIS P2 TSL 1 (best) BASIC20.73■□□□□ 0.91
Neil3Q8K203 Gm43445-201ENSMUST00000198564 2091 ntBASIC20.73■□□□□ 0.91
Neil3Q8K203 Popdc3-202ENSMUST00000161803 1369 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
Neil3Q8K203 Snf8-202ENSMUST00000107700 849 ntTSL 2 BASIC20.71■□□□□ 0.91
Neil3Q8K203 Epb41l4b-203ENSMUST00000095076 6746 ntAPPRIS ALT2 TSL 5 BASIC20.71■□□□□ 0.91
Neil3Q8K203 En1-201ENSMUST00000079721 2624 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Neil3Q8K203 Jag2-201ENSMUST00000075827 5106 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Neil3Q8K203 Raly-201ENSMUST00000029120 1802 ntAPPRIS ALT2 TSL 5 BASIC20.68■□□□□ 0.9
Neil3Q8K203 Zfp787-201ENSMUST00000094870 1897 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Neil3Q8K203 Tmem189-201ENSMUST00000006587 2329 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Neil3Q8K203 Fcnaos-201ENSMUST00000127642 1351 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
Neil3Q8K203 Pfdn2-202ENSMUST00000135941 1735 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Neil3Q8K203 Rnf220-212ENSMUST00000221654 1949 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
Neil3Q8K203 Chrna5-204ENSMUST00000217408 2446 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
Neil3Q8K203 Homer3-202ENSMUST00000087467 880 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
Neil3Q8K203 Ppp1r14c-202ENSMUST00000217573 2013 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
Neil3Q8K203 Dapk3-209ENSMUST00000219850 1482 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Neil3Q8K203 Hoxa13-203ENSMUST00000147595 2395 ntAPPRIS P5 TSL 5 BASIC20.64■□□□□ 0.89
Neil3Q8K203 Gm24804-201ENSMUST00000174982 85 ntBASIC20.64■□□□□ 0.89
Neil3Q8K203 Arl2bp-201ENSMUST00000034228 2063 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Neil3Q8K203 Tnfsfm13-202ENSMUST00000174159 1470 ntAPPRIS ALT2 TSL 2 BASIC20.63■□□□□ 0.89
Neil3Q8K203 Ppp1cc-201ENSMUST00000086294 1442 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
Neil3Q8K203 Kdm2a-203ENSMUST00000116571 2413 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
Neil3Q8K203 Gsk3a-201ENSMUST00000071739 2260 ntAPPRIS P2 TSL 2 BASIC20.61■□□□□ 0.89
Neil3Q8K203 Mef2a-201ENSMUST00000032776 2476 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Neil3Q8K203 Mkrn1-202ENSMUST00000051671 1511 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
Neil3Q8K203 Fxyd1-205ENSMUST00000205439 535 ntAPPRIS P1 TSL 5 BASIC20.58■□□□□ 0.89
Neil3Q8K203 Ttc19-202ENSMUST00000101075 2193 ntAPPRIS ALT2 TSL 1 (best) BASIC20.58■□□□□ 0.88
Neil3Q8K203 Htra4-201ENSMUST00000084031 2180 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
Neil3Q8K203 Uncx-201ENSMUST00000172997 2498 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Neil3Q8K203 Ildr2-205ENSMUST00000193860 2320 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
Neil3Q8K203 Ndufaf6-201ENSMUST00000058183 1082 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Neil3Q8K203 Fam168b-201ENSMUST00000047534 5030 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Neil3Q8K203 Rab22a-202ENSMUST00000109110 849 ntTSL 5 BASIC20.52■□□□□ 0.88
Neil3Q8K203 Btf3-201ENSMUST00000022163 1091 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
Neil3Q8K203 Ssx2ip-202ENSMUST00000106149 2416 ntAPPRIS ALT2 TSL 1 (best) BASIC20.52■□□□□ 0.87
Neil3Q8K203 Mapk13-201ENSMUST00000004986 1392 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Neil3Q8K203 Plekha3-201ENSMUST00000111920 2534 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Neil3Q8K203 Crlf1-201ENSMUST00000008032 1644 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Neil3Q8K203 Cldn10-203ENSMUST00000100314 2128 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Neil3Q8K203 Plpp2-201ENSMUST00000063879 1654 ntAPPRIS P3 TSL 1 (best) BASIC20.5■□□□□ 0.87
Neil3Q8K203 Vdac3-202ENSMUST00000179233 1423 ntAPPRIS ALT1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Neil3Q8K203 Mast2-203ENSMUST00000106485 5705 ntAPPRIS ALT2 TSL 1 (best) BASIC20.5■□□□□ 0.87
Neil3Q8K203 Mast2-204ENSMUST00000106486 5723 ntAPPRIS P4 TSL 1 (best) BASIC20.5■□□□□ 0.87
Neil3Q8K203 Abhd17a-201ENSMUST00000003436 1468 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Neil3Q8K203 Syt7-201ENSMUST00000073899 1605 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Neil3Q8K203 Smurf1-201ENSMUST00000085684 5343 ntAPPRIS P4 TSL 1 (best) BASIC20.49■□□□□ 0.87
Neil3Q8K203 Peli2-204ENSMUST00000226513 1320 ntBASIC20.49■□□□□ 0.87
Neil3Q8K203 Spata1-201ENSMUST00000029839 1920 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Neil3Q8K203 Gnas-207ENSMUST00000109085 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Neil3Q8K203 Clk2-203ENSMUST00000121931 2112 ntAPPRIS ALT1 TSL 5 BASIC20.46■□□□□ 0.87
Neil3Q8K203 Maz-202ENSMUST00000205461 796 ntTSL 5 BASIC20.46■□□□□ 0.87
Neil3Q8K203 Rragc-201ENSMUST00000030399 2593 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Neil3Q8K203 Gm6345-201ENSMUST00000180378 1691 ntBASIC20.45■□□□□ 0.86
Neil3Q8K203 Tnfsf12-202ENSMUST00000181810 1435 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Neil3Q8K203 Dnttip1-202ENSMUST00000109326 476 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
Neil3Q8K203 Amer2-203ENSMUST00000225247 2662 ntBASIC20.44■□□□□ 0.86
Neil3Q8K203 4921531C22Rik-201ENSMUST00000150145 1905 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
Neil3Q8K203 Mpp6-203ENSMUST00000166318 2222 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
Neil3Q8K203 Dhrs13-203ENSMUST00000122342 1791 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
Neil3Q8K203 Gm26566-201ENSMUST00000181601 1038 ntAPPRIS P1 BASIC20.42■□□□□ 0.86
Neil3Q8K203 Zswim5-201ENSMUST00000044823 5582 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Neil3Q8K203 Srp9-202ENSMUST00000111018 823 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
Neil3Q8K203 Mkrn1-203ENSMUST00000114822 751 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
Neil3Q8K203 Cbln1-201ENSMUST00000034076 2800 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Neil3Q8K203 Mypop-203ENSMUST00000131087 1951 ntAPPRIS P1 TSL 5 BASIC20.39■□□□□ 0.86
Neil3Q8K203 Kcnmb4os2-201ENSMUST00000080943 1571 ntTSL 5 BASIC20.39■□□□□ 0.85
Neil3Q8K203 Exosc6-201ENSMUST00000210390 1326 ntAPPRIS P1 BASIC20.39■□□□□ 0.85
Neil3Q8K203 Vsig8-202ENSMUST00000177086 1519 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
Neil3Q8K203 Arhgap22-201ENSMUST00000111955 2148 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
Neil3Q8K203 Gjc1-201ENSMUST00000068933 1903 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Neil3Q8K203 Yif1b-202ENSMUST00000108237 1086 ntTSL 5 BASIC20.38■□□□□ 0.85
Neil3Q8K203 Fbll1-201ENSMUST00000160726 1503 ntAPPRIS P1 BASIC20.37■□□□□ 0.85
Neil3Q8K203 Ssbp3-202ENSMUST00000072753 1924 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
Neil3Q8K203 Runx3-202ENSMUST00000119564 1855 ntAPPRIS ALT2 TSL 1 (best) BASIC20.36■□□□□ 0.85
Neil3Q8K203 AI837181-202ENSMUST00000159759 1515 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Neil3Q8K203 Vstm2l-201ENSMUST00000109523 1363 ntAPPRIS P1 TSL 5 BASIC20.35■□□□□ 0.85
Neil3Q8K203 Gm960-202ENSMUST00000177696 2262 ntAPPRIS P2 TSL 5 BASIC20.34■□□□□ 0.85
Neil3Q8K203 Cetn4-201ENSMUST00000071400 1808 ntTSL 5 BASIC20.34■□□□□ 0.85
Neil3Q8K203 B4galt7-202ENSMUST00000100764 2195 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
Neil3Q8K203 Smarcc1-203ENSMUST00000197480 1949 ntTSL 1 (best) BASIC20.33■□□□□ 0.84
Neil3Q8K203 Rundc3a-204ENSMUST00000107105 1861 ntTSL 1 (best) BASIC20.33■□□□□ 0.84
Neil3Q8K203 Hdgf-201ENSMUST00000005017 2245 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Neil3Q8K203 Coq10a-207ENSMUST00000220227 1434 ntAPPRIS ALT2 TSL 5 BASIC20.32■□□□□ 0.84
Neil3Q8K203 Cgref1-201ENSMUST00000031051 1442 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Neil3Q8K203 Fezf2-202ENSMUST00000224023 1917 ntBASIC20.31■□□□□ 0.84
Neil3Q8K203 Guf1-201ENSMUST00000031113 1769 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
Neil3Q8K203 Reep6-203ENSMUST00000105355 2127 ntAPPRIS ALT2 TSL 1 (best) BASIC20.3■□□□□ 0.84
Neil3Q8K203 Reep6-204ENSMUST00000105357 2127 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
Neil3Q8K203 Dennd5a-202ENSMUST00000106722 4862 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
Neil3Q8K203 Susd4-202ENSMUST00000153348 1898 ntAPPRIS P1 TSL 5 BASIC20.29■□□□□ 0.84
Neil3Q8K203 Gm16148-201ENSMUST00000119653 893 ntBASIC20.29■□□□□ 0.84
Neil3Q8K203 Lemd2-201ENSMUST00000055117 2595 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Neil3Q8K203 Gsk3a-202ENSMUST00000108411 2248 ntAPPRIS ALT2 TSL 5 BASIC20.26■□□□□ 0.83
Neil3Q8K203 Dtnb-211ENSMUST00000173240 2218 ntTSL 5 BASIC20.26■□□□□ 0.83
Neil3Q8K203 Gm5601-202ENSMUST00000207161 1437 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
Neil3Q8K203 Amigo1-201ENSMUST00000050909 5030 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Neil3Q8K203 2410017I17Rik-202ENSMUST00000090537 2053 ntTSL 2 BASIC20.25■□□□□ 0.83
Neil3Q8K203 Mfsd5-201ENSMUST00000051341 1742 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Retrieved 100 of 76,532 protein–RNA pairs in 11.7 ms