Protein–RNA interactions for Protein: Q8CHD8

Rab11fip3, Rab11 family-interacting protein 3, mousemouse

Predictions only

Length 1,047 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rab11fip3Q8CHD8 Tgfbr1-205ENSMUST00000126171 1829 ntTSL 5 BASIC33.56■■■□□ 2.96
Rab11fip3Q8CHD8 Tmco6-201ENSMUST00000007046 1817 ntAPPRIS P1 TSL 1 (best) BASIC33.56■■■□□ 2.96
Rab11fip3Q8CHD8 Tnfsfm13-201ENSMUST00000108649 1049 ntAPPRIS ALT2 TSL 5 BASIC33.55■■■□□ 2.96
Rab11fip3Q8CHD8 Gm5814-201ENSMUST00000177586 378 ntAPPRIS P1 BASIC33.55■■■□□ 2.96
Rab11fip3Q8CHD8 Pradc1-201ENSMUST00000032080 1038 ntAPPRIS P1 TSL 1 (best) BASIC33.55■■■□□ 2.96
Rab11fip3Q8CHD8 Ildr2-207ENSMUST00000195557 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC33.54■■■□□ 2.96
Rab11fip3Q8CHD8 Hrh3-208ENSMUST00000171736 906 ntTSL 5 BASIC33.53■■■□□ 2.96
Rab11fip3Q8CHD8 Gm2415-204ENSMUST00000190235 2004 ntBASIC33.52■■■□□ 2.96
Rab11fip3Q8CHD8 Paip1-203ENSMUST00000126957 1731 ntTSL 5 BASIC33.51■■■□□ 2.96
Rab11fip3Q8CHD8 Brsk2-203ENSMUST00000078200 2363 ntAPPRIS P4 TSL 1 (best) BASIC33.51■■■□□ 2.95
Rab11fip3Q8CHD8 Qrich1-209ENSMUST00000194385 975 ntTSL 2 BASIC33.5■■■□□ 2.95
Rab11fip3Q8CHD8 Gm7334-201ENSMUST00000061681 1356 ntAPPRIS P1 BASIC33.48■■■□□ 2.95
Rab11fip3Q8CHD8 Znrf3-202ENSMUST00000143746 1022 ntTSL 1 (best) BASIC33.48■■■□□ 2.95
Rab11fip3Q8CHD8 1810026B05Rik-202ENSMUST00000184554 782 ntTSL 3 BASIC33.47■■■□□ 2.95
Rab11fip3Q8CHD8 Smarcc2-205ENSMUST00000218228 603 ntTSL 5 BASIC33.47■■■□□ 2.95
Rab11fip3Q8CHD8 Fbll1-201ENSMUST00000160726 1503 ntAPPRIS P1 BASIC33.47■■■□□ 2.95
Rab11fip3Q8CHD8 Raly-202ENSMUST00000058089 1747 ntAPPRIS P3 TSL 1 (best) BASIC33.45■■■□□ 2.94
Rab11fip3Q8CHD8 AC150314.2-201ENSMUST00000214135 834 ntTSL 5 BASIC33.44■■■□□ 2.94
Rab11fip3Q8CHD8 Mthfd2l-203ENSMUST00000202781 688 ntTSL 1 (best) BASIC33.43■■■□□ 2.94
Rab11fip3Q8CHD8 Macrod1-201ENSMUST00000040261 1274 ntAPPRIS P1 TSL 1 (best) BASIC33.43■■■□□ 2.94
Rab11fip3Q8CHD8 Phlda1-201ENSMUST00000164773 1949 ntAPPRIS P1 TSL 1 (best) BASIC33.43■■■□□ 2.94
Rab11fip3Q8CHD8 Tlx1-201ENSMUST00000026236 2065 ntAPPRIS P1 TSL 1 (best) BASIC33.42■■■□□ 2.94
Rab11fip3Q8CHD8 Gm527-201ENSMUST00000058135 1468 ntAPPRIS P1 TSL 1 (best) BASIC33.42■■■□□ 2.94
Rab11fip3Q8CHD8 Gm24970-201ENSMUST00000175582 82 ntBASIC33.41■■■□□ 2.94
Rab11fip3Q8CHD8 Fam136a-201ENSMUST00000071492 1643 ntAPPRIS P1 TSL 1 (best) BASIC33.4■■■□□ 2.94
Rab11fip3Q8CHD8 Junos-204ENSMUST00000128094 830 ntTSL 1 (best) BASIC33.39■■■□□ 2.94
Rab11fip3Q8CHD8 1810026B05Rik-206ENSMUST00000187421 519 ntTSL 3 BASIC33.39■■■□□ 2.94
Rab11fip3Q8CHD8 Plpp2-201ENSMUST00000063879 1654 ntAPPRIS P3 TSL 1 (best) BASIC33.39■■■□□ 2.94
Rab11fip3Q8CHD8 Crip2-201ENSMUST00000084882 1439 ntAPPRIS P1 TSL 1 (best) BASIC33.38■■■□□ 2.93
Rab11fip3Q8CHD8 Tmem243-201ENSMUST00000115365 1040 ntAPPRIS P1 TSL 2 BASIC33.37■■■□□ 2.93
Rab11fip3Q8CHD8 Rundc3a-201ENSMUST00000006750 2046 ntAPPRIS P2 TSL 1 (best) BASIC33.35■■■□□ 2.93
Rab11fip3Q8CHD8 C2cd4d-201ENSMUST00000169433 1321 ntAPPRIS P1 TSL 3 BASIC33.34■■■□□ 2.93
Rab11fip3Q8CHD8 Stard3nl-210ENSMUST00000222869 1030 ntTSL 5 BASIC33.34■■■□□ 2.93
Rab11fip3Q8CHD8 Reep6-203ENSMUST00000105355 2127 ntAPPRIS ALT2 TSL 1 (best) BASIC33.33■■■□□ 2.93
Rab11fip3Q8CHD8 Reep6-204ENSMUST00000105357 2127 ntTSL 1 (best) BASIC33.33■■■□□ 2.93
Rab11fip3Q8CHD8 Tspan3-201ENSMUST00000034876 1716 ntAPPRIS P1 TSL 1 (best) BASIC33.33■■■□□ 2.93
Rab11fip3Q8CHD8 Rhobtb3-202ENSMUST00000109606 1676 ntTSL 1 (best) BASIC33.33■■■□□ 2.93
Rab11fip3Q8CHD8 Gm20503-201ENSMUST00000174664 1294 ntAPPRIS P1 TSL 5 BASIC33.32■■■□□ 2.92
Rab11fip3Q8CHD8 Dut-202ENSMUST00000082122 1020 ntTSL 1 (best) BASIC33.32■■■□□ 2.92
Rab11fip3Q8CHD8 Dennd1b-209ENSMUST00000200533 1853 ntTSL 1 (best) BASIC33.31■■■□□ 2.92
Rab11fip3Q8CHD8 Gm6658-202ENSMUST00000209493 1885 ntBASIC33.3■■■□□ 2.92
Rab11fip3Q8CHD8 C1qtnf5-201ENSMUST00000114815 1215 ntAPPRIS P1 TSL 1 (best) BASIC33.27■■■□□ 2.92
Rab11fip3Q8CHD8 Mxra7-202ENSMUST00000047715 757 ntAPPRIS ALT2 TSL 1 (best) BASIC33.27■■■□□ 2.92
Rab11fip3Q8CHD8 Raly-204ENSMUST00000116389 1759 ntAPPRIS ALT2 TSL 5 BASIC33.26■■■□□ 2.92
Rab11fip3Q8CHD8 Gng13-201ENSMUST00000115108 347 ntAPPRIS P1 TSL 1 (best) BASIC33.26■■■□□ 2.91
Rab11fip3Q8CHD8 Hspd1-201ENSMUST00000027123 2423 ntAPPRIS P1 TSL 1 (best) BASIC33.25■■■□□ 2.91
Rab11fip3Q8CHD8 Tcte2-204ENSMUST00000130033 1462 ntAPPRIS ALT2 TSL 1 (best) BASIC33.25■■■□□ 2.91
Rab11fip3Q8CHD8 Hmx1-201ENSMUST00000087674 1526 ntAPPRIS P1 TSL 1 (best) BASIC33.24■■■□□ 2.91
Rab11fip3Q8CHD8 4932443I19Rik-201ENSMUST00000166277 799 ntAPPRIS P2 TSL 1 (best) BASIC33.21■■■□□ 2.91
Rab11fip3Q8CHD8 Srp9-201ENSMUST00000027792 1367 ntAPPRIS P1 TSL 1 (best) BASIC33.21■■■□□ 2.91
Rab11fip3Q8CHD8 Akt1s1-202ENSMUST00000107880 1757 ntAPPRIS P3 TSL 1 (best) BASIC33.2■■■□□ 2.91
Rab11fip3Q8CHD8 Ccm2-201ENSMUST00000000388 1858 ntAPPRIS P1 TSL 1 (best) BASIC33.18■■■□□ 2.9
Rab11fip3Q8CHD8 Fcnaos-201ENSMUST00000127642 1351 ntTSL 1 (best) BASIC33.17■■■□□ 2.9
Rab11fip3Q8CHD8 Egr3-201ENSMUST00000035908 1509 ntAPPRIS ALT1 TSL 1 (best) BASIC33.15■■■□□ 2.9
Rab11fip3Q8CHD8 Ppp1r14b-201ENSMUST00000070850 919 ntAPPRIS P1 TSL 1 (best) BASIC33.15■■■□□ 2.9
Rab11fip3Q8CHD8 Gm26859-201ENSMUST00000181743 1852 ntTSL 5 BASIC33.14■■■□□ 2.9
Rab11fip3Q8CHD8 Six3-202ENSMUST00000175898 2419 ntAPPRIS P2 TSL 1 (best) BASIC33.14■■■□□ 2.9
Rab11fip3Q8CHD8 Gm15672-201ENSMUST00000151512 1354 ntTSL 1 (best) BASIC33.13■■■□□ 2.89
Rab11fip3Q8CHD8 Gm43863-201ENSMUST00000203822 1192 ntBASIC33.12■■■□□ 2.89
Rab11fip3Q8CHD8 Tsen34-203ENSMUST00000108629 1238 ntTSL 1 (best) BASIC33.1■■■□□ 2.89
Rab11fip3Q8CHD8 Gnas-207ENSMUST00000109085 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC33.1■■■□□ 2.89
Rab11fip3Q8CHD8 Pitpna-205ENSMUST00000179445 1665 ntAPPRIS ALT1 TSL 5 BASIC33.1■■■□□ 2.89
Rab11fip3Q8CHD8 Tpm1-216ENSMUST00000113707 1898 ntTSL 1 (best) BASIC33.1■■■□□ 2.89
Rab11fip3Q8CHD8 Twist1-201ENSMUST00000049089 1628 ntAPPRIS P1 TSL 1 (best) BASIC33.1■■■□□ 2.89
Rab11fip3Q8CHD8 Dlx6os2-201ENSMUST00000178206 1354 ntBASIC33.09■■■□□ 2.89
Rab11fip3Q8CHD8 Spg7-201ENSMUST00000108868 845 ntTSL 2 BASIC33.09■■■□□ 2.89
Rab11fip3Q8CHD8 Gm30346-201ENSMUST00000218641 1699 ntBASIC33.09■■■□□ 2.89
Rab11fip3Q8CHD8 Pradc1-202ENSMUST00000113770 610 ntTSL 1 (best) BASIC33.07■■■□□ 2.88
Rab11fip3Q8CHD8 A330023F24Rik-201ENSMUST00000181226 955 ntTSL 1 (best) BASIC33.07■■■□□ 2.88
Rab11fip3Q8CHD8 2810459M11Rik-201ENSMUST00000027429 1225 ntAPPRIS ALT2 TSL 1 (best) BASIC33.07■■■□□ 2.88
Rab11fip3Q8CHD8 Crem-227ENSMUST00000149803 1422 ntTSL 1 (best) BASIC33.07■■■□□ 2.88
Rab11fip3Q8CHD8 Kmt5a-202ENSMUST00000100709 1425 ntTSL 1 (best) BASIC33.03■■■□□ 2.88
Rab11fip3Q8CHD8 Ywhaq-202ENSMUST00000103002 2110 ntAPPRIS P1 TSL 1 (best) BASIC33.03■■■□□ 2.88
Rab11fip3Q8CHD8 Eif4e2-203ENSMUST00000113230 1569 ntTSL 1 (best) BASIC33.01■■■□□ 2.88
Rab11fip3Q8CHD8 Il3ra-201ENSMUST00000090591 1614 ntAPPRIS P2 TSL 1 (best) BASIC33■■■□□ 2.87
Rab11fip3Q8CHD8 2310050C09Rik-201ENSMUST00000163439 1078 ntAPPRIS P1 TSL 2 BASIC33■■■□□ 2.87
Rab11fip3Q8CHD8 A530058N18Rik-204ENSMUST00000141209 709 ntTSL 5 BASIC32.99■■■□□ 2.87
Rab11fip3Q8CHD8 Pfn2-202ENSMUST00000119344 1879 ntTSL 1 (best) BASIC32.99■■■□□ 2.87
Rab11fip3Q8CHD8 A430072P03Rik-201ENSMUST00000161480 1510 ntTSL 1 (best) BASIC32.98■■■□□ 2.87
Rab11fip3Q8CHD8 Lactb-201ENSMUST00000034929 2031 ntAPPRIS P1 TSL 1 (best) BASIC32.96■■■□□ 2.87
Rab11fip3Q8CHD8 Cetn4-202ENSMUST00000075537 762 ntTSL 3 BASIC32.96■■■□□ 2.87
Rab11fip3Q8CHD8 Snx3-201ENSMUST00000019939 1401 ntAPPRIS P1 TSL 1 (best) BASIC32.95■■■□□ 2.87
Rab11fip3Q8CHD8 Triobp-206ENSMUST00000130663 1660 ntAPPRIS ALT2 TSL 5 BASIC32.95■■■□□ 2.87
Rab11fip3Q8CHD8 Nelfe-204ENSMUST00000173357 1399 ntAPPRIS P1 TSL 1 (best) BASIC32.95■■■□□ 2.86
Rab11fip3Q8CHD8 Phf10-201ENSMUST00000024657 1663 ntAPPRIS P1 TSL 1 (best) BASIC32.94■■■□□ 2.86
Rab11fip3Q8CHD8 Cebpb-201ENSMUST00000070642 1504 ntAPPRIS P1 BASIC32.94■■■□□ 2.86
Rab11fip3Q8CHD8 Rab7-204ENSMUST00000113598 2031 ntAPPRIS P1 TSL 1 (best) BASIC32.94■■■□□ 2.86
Rab11fip3Q8CHD8 AC157572.2-201ENSMUST00000226970 908 ntBASIC32.93■■■□□ 2.86
Rab11fip3Q8CHD8 A530058N18Rik-208ENSMUST00000131299 1387 ntTSL 2 BASIC32.93■■■□□ 2.86
Rab11fip3Q8CHD8 Tbcel-204ENSMUST00000128959 1535 ntAPPRIS P1 TSL 5 BASIC32.92■■■□□ 2.86
Rab11fip3Q8CHD8 Eid2-201ENSMUST00000059596 1392 ntAPPRIS P1 BASIC32.91■■■□□ 2.86
Rab11fip3Q8CHD8 Cdv3-205ENSMUST00000189896 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC32.89■■■□□ 2.86
Rab11fip3Q8CHD8 Gm12523-201ENSMUST00000148844 599 ntTSL 5 BASIC32.88■■■□□ 2.85
Rab11fip3Q8CHD8 Rbm17-201ENSMUST00000040314 1599 ntAPPRIS P1 TSL 1 (best) BASIC32.83■■■□□ 2.85
Rab11fip3Q8CHD8 5730480H06Rik-201ENSMUST00000030968 1616 ntAPPRIS P1 TSL 1 (best) BASIC32.83■■■□□ 2.85
Rab11fip3Q8CHD8 Cib1-201ENSMUST00000065163 1047 ntAPPRIS P1 TSL 1 (best) BASIC32.82■■■□□ 2.84
Rab11fip3Q8CHD8 Dazap1-202ENSMUST00000105361 1537 ntAPPRIS ALT1 TSL 1 (best) BASIC32.82■■■□□ 2.84
Rab11fip3Q8CHD8 Evx2-202ENSMUST00000173623 1428 ntAPPRIS P2 TSL 1 (best) BASIC32.81■■■□□ 2.84
Rab11fip3Q8CHD8 Dleu2-206ENSMUST00000182537 318 ntTSL 2 BASIC32.8■■■□□ 2.84
Rab11fip3Q8CHD8 Cpsf4-201ENSMUST00000070487 1606 ntTSL 1 (best) BASIC32.79■■■□□ 2.84
Retrieved 100 of 76,532 protein–RNA pairs in 50.7 ms