Protein–RNA interactions for Protein: Q8CGU1

Calcoco1, Calcium-binding and coiled-coil domain-containing protein 1, mousemouse

Predictions only

Length 691 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Calcoco1Q8CGU1 Adgrb1-203ENSMUST00000185682 2744 ntTSL 1 (best) BASIC25.92■■□□□ 1.74
Calcoco1Q8CGU1 Mtch1-201ENSMUST00000095427 1922 ntAPPRIS P3 TSL 1 (best) BASIC25.92■■□□□ 1.74
Calcoco1Q8CGU1 Traf4-201ENSMUST00000017530 2078 ntAPPRIS P1 TSL 1 (best) BASIC25.9■■□□□ 1.74
Calcoco1Q8CGU1 Raly-203ENSMUST00000109701 1709 ntAPPRIS P3 TSL 1 (best) BASIC25.9■■□□□ 1.74
Calcoco1Q8CGU1 Gm43445-201ENSMUST00000198564 2091 ntBASIC25.89■■□□□ 1.74
Calcoco1Q8CGU1 Ctbp1-201ENSMUST00000079746 2279 ntAPPRIS P3 TSL 1 (best) BASIC25.89■■□□□ 1.73
Calcoco1Q8CGU1 Ino80b-201ENSMUST00000032109 1038 ntAPPRIS P2 TSL 1 (best) BASIC25.88■■□□□ 1.73
Calcoco1Q8CGU1 Gm24804-201ENSMUST00000174982 85 ntBASIC25.87■■□□□ 1.73
Calcoco1Q8CGU1 Rnf130-201ENSMUST00000054684 1415 ntTSL 1 (best) BASIC25.86■■□□□ 1.73
Calcoco1Q8CGU1 Tpst1-201ENSMUST00000040721 2050 ntAPPRIS P1 TSL 1 (best) BASIC25.86■■□□□ 1.73
Calcoco1Q8CGU1 Fam220a-205ENSMUST00000169329 2331 ntAPPRIS P1 TSL 1 (best) BASIC25.83■■□□□ 1.73
Calcoco1Q8CGU1 Pon2-201ENSMUST00000057792 2409 ntAPPRIS P1 TSL 1 (best) BASIC25.81■■□□□ 1.72
Calcoco1Q8CGU1 Casp9-202ENSMUST00000097805 1498 ntTSL 1 (best) BASIC25.8■■□□□ 1.72
Calcoco1Q8CGU1 Kansl2-201ENSMUST00000023727 2311 ntAPPRIS ALT2 TSL 5 BASIC25.79■■□□□ 1.72
Calcoco1Q8CGU1 Maz-202ENSMUST00000205461 796 ntTSL 5 BASIC25.79■■□□□ 1.72
Calcoco1Q8CGU1 Heca-201ENSMUST00000037879 5098 ntAPPRIS P1 TSL 1 (best) BASIC25.79■■□□□ 1.72
Calcoco1Q8CGU1 Ube2q2-202ENSMUST00000121677 1680 ntAPPRIS ALT2 TSL 5 BASIC25.78■■□□□ 1.72
Calcoco1Q8CGU1 Foxc1-201ENSMUST00000062292 5844 ntAPPRIS P1 BASIC25.78■■□□□ 1.72
Calcoco1Q8CGU1 Homer3-202ENSMUST00000087467 880 ntTSL 1 (best) BASIC25.75■■□□□ 1.71
Calcoco1Q8CGU1 Fezf2-202ENSMUST00000224023 1917 ntBASIC25.74■■□□□ 1.71
Calcoco1Q8CGU1 Arx-202ENSMUST00000113947 2454 ntAPPRIS P1 TSL 1 (best) BASIC25.74■■□□□ 1.71
Calcoco1Q8CGU1 Fam120a-201ENSMUST00000060805 5105 ntAPPRIS P1 TSL 1 (best) BASIC25.74■■□□□ 1.71
Calcoco1Q8CGU1 Mipep-204ENSMUST00000225043 1548 ntBASIC25.73■■□□□ 1.71
Calcoco1Q8CGU1 Frs3-201ENSMUST00000113296 2144 ntAPPRIS P1 TSL 1 (best) BASIC25.73■■□□□ 1.71
Calcoco1Q8CGU1 Fam220a-206ENSMUST00000196487 2278 ntAPPRIS P1 TSL 1 (best) BASIC25.72■■□□□ 1.71
Calcoco1Q8CGU1 Rnf130-202ENSMUST00000102776 1502 ntAPPRIS P1 TSL 1 (best) BASIC25.72■■□□□ 1.71
Calcoco1Q8CGU1 Tprgl-201ENSMUST00000030896 1724 ntAPPRIS P1 TSL 1 (best) BASIC25.71■■□□□ 1.71
Calcoco1Q8CGU1 Mpp6-203ENSMUST00000166318 2222 ntTSL 1 (best) BASIC25.71■■□□□ 1.71
Calcoco1Q8CGU1 Zfp91-201ENSMUST00000038627 5531 ntAPPRIS P1 TSL 1 (best) BASIC25.71■■□□□ 1.71
Calcoco1Q8CGU1 Lactb-202ENSMUST00000215172 1806 ntTSL 1 (best) BASIC25.7■■□□□ 1.71
Calcoco1Q8CGU1 Ankrd28-201ENSMUST00000014640 6712 ntAPPRIS P2 TSL 1 (best) BASIC25.69■■□□□ 1.7
Calcoco1Q8CGU1 E2f4-201ENSMUST00000015003 1993 ntAPPRIS P1 TSL 1 (best) BASIC25.68■■□□□ 1.7
Calcoco1Q8CGU1 Lrrc4b-201ENSMUST00000058667 2728 ntAPPRIS P1 TSL 1 (best) BASIC25.66■■□□□ 1.7
Calcoco1Q8CGU1 Ppp1cc-201ENSMUST00000086294 1442 ntTSL 1 (best) BASIC25.66■■□□□ 1.7
Calcoco1Q8CGU1 Galnt10-202ENSMUST00000108846 1745 ntTSL 1 (best) BASIC25.66■■□□□ 1.7
Calcoco1Q8CGU1 2410017I17Rik-202ENSMUST00000090537 2053 ntTSL 2 BASIC25.65■■□□□ 1.7
Calcoco1Q8CGU1 Amer2-203ENSMUST00000225247 2662 ntBASIC25.65■■□□□ 1.7
Calcoco1Q8CGU1 Shf-201ENSMUST00000048635 1431 ntAPPRIS P2 TSL 1 (best) BASIC25.63■■□□□ 1.69
Calcoco1Q8CGU1 Mapk13-201ENSMUST00000004986 1392 ntAPPRIS P1 TSL 1 (best) BASIC25.63■■□□□ 1.69
Calcoco1Q8CGU1 Tpm1-216ENSMUST00000113707 1898 ntTSL 1 (best) BASIC25.63■■□□□ 1.69
Calcoco1Q8CGU1 Ndufaf6-201ENSMUST00000058183 1082 ntAPPRIS P1 TSL 1 (best) BASIC25.62■■□□□ 1.69
Calcoco1Q8CGU1 Rab40c-209ENSMUST00000179998 2456 ntAPPRIS P1 TSL 5 BASIC25.62■■□□□ 1.69
Calcoco1Q8CGU1 Gpr12-201ENSMUST00000036211 2219 ntAPPRIS P1 TSL 1 (best) BASIC25.61■■□□□ 1.69
Calcoco1Q8CGU1 Fxyd1-205ENSMUST00000205439 535 ntAPPRIS P1 TSL 5 BASIC25.61■■□□□ 1.69
Calcoco1Q8CGU1 Popdc3-202ENSMUST00000161803 1369 ntTSL 1 (best) BASIC25.6■■□□□ 1.69
Calcoco1Q8CGU1 Mypop-203ENSMUST00000131087 1951 ntAPPRIS P1 TSL 5 BASIC25.59■■□□□ 1.69
Calcoco1Q8CGU1 Ildr2-205ENSMUST00000193860 2320 ntTSL 1 (best) BASIC25.59■■□□□ 1.69
Calcoco1Q8CGU1 Ttc19-202ENSMUST00000101075 2193 ntAPPRIS ALT2 TSL 1 (best) BASIC25.58■■□□□ 1.69
Calcoco1Q8CGU1 Marveld2-202ENSMUST00000163163 2187 ntTSL 1 (best) BASIC25.58■■□□□ 1.69
Calcoco1Q8CGU1 Rgs7-206ENSMUST00000194555 2431 ntAPPRIS ALT2 TSL 1 (best) BASIC25.58■■□□□ 1.69
Calcoco1Q8CGU1 Lpcat4-201ENSMUST00000028554 2275 ntAPPRIS P1 TSL 1 (best) BASIC25.56■■□□□ 1.68
Calcoco1Q8CGU1 Cenpv-201ENSMUST00000018653 1032 ntAPPRIS P1 TSL 1 (best) BASIC25.56■■□□□ 1.68
Calcoco1Q8CGU1 Kcna7-201ENSMUST00000107774 2182 ntAPPRIS P1 TSL 1 (best) BASIC25.56■■□□□ 1.68
Calcoco1Q8CGU1 Slc25a28-201ENSMUST00000046038 1514 ntAPPRIS P1 TSL 1 (best) BASIC25.55■■□□□ 1.68
Calcoco1Q8CGU1 Yif1b-202ENSMUST00000108237 1086 ntTSL 5 BASIC25.54■■□□□ 1.68
Calcoco1Q8CGU1 Mkrn1-203ENSMUST00000114822 751 ntTSL 1 (best) BASIC25.53■■□□□ 1.68
Calcoco1Q8CGU1 Tmem59-201ENSMUST00000030361 1775 ntAPPRIS P1 TSL 1 (best) BASIC25.53■■□□□ 1.68
Calcoco1Q8CGU1 Rcor2-201ENSMUST00000066646 2801 ntAPPRIS P1 TSL 1 (best) BASIC25.53■■□□□ 1.68
Calcoco1Q8CGU1 Dnttip1-202ENSMUST00000109326 476 ntTSL 1 (best) BASIC25.52■■□□□ 1.68
Calcoco1Q8CGU1 Gsk3a-202ENSMUST00000108411 2248 ntAPPRIS ALT2 TSL 5 BASIC25.52■■□□□ 1.68
Calcoco1Q8CGU1 AI837181-202ENSMUST00000159759 1515 ntAPPRIS P1 TSL 1 (best) BASIC25.52■■□□□ 1.68
Calcoco1Q8CGU1 Atp5a1-202ENSMUST00000114748 2674 ntTSL 1 (best) BASIC25.51■■□□□ 1.67
Calcoco1Q8CGU1 Pfn2-202ENSMUST00000119344 1879 ntTSL 1 (best) BASIC25.51■■□□□ 1.67
Calcoco1Q8CGU1 Maz-204ENSMUST00000206254 2282 ntTSL 5 BASIC25.51■■□□□ 1.67
Calcoco1Q8CGU1 AC153890.1-201ENSMUST00000220021 2469 ntBASIC25.51■■□□□ 1.67
Calcoco1Q8CGU1 Panx2-202ENSMUST00000161372 2314 ntTSL 1 (best) BASIC25.5■■□□□ 1.67
Calcoco1Q8CGU1 Ric1-206ENSMUST00000162184 2157 ntTSL 1 (best) BASIC25.5■■□□□ 1.67
Calcoco1Q8CGU1 Agap3-201ENSMUST00000024123 3207 ntAPPRIS P1 TSL 1 (best) BASIC25.5■■□□□ 1.67
Calcoco1Q8CGU1 Hdgf-201ENSMUST00000005017 2245 ntAPPRIS P1 TSL 1 (best) BASIC25.5■■□□□ 1.67
Calcoco1Q8CGU1 Kcnq5-206ENSMUST00000173404 2775 ntAPPRIS ALT2 TSL 5 BASIC25.5■■□□□ 1.67
Calcoco1Q8CGU1 Vdac3-202ENSMUST00000179233 1423 ntAPPRIS ALT1 TSL 1 (best) BASIC25.49■■□□□ 1.67
Calcoco1Q8CGU1 Klhl25-205ENSMUST00000206019 2299 ntAPPRIS P1 TSL 1 (best) BASIC25.48■■□□□ 1.67
Calcoco1Q8CGU1 Mkrn1-202ENSMUST00000051671 1511 ntTSL 1 (best) BASIC25.47■■□□□ 1.67
Calcoco1Q8CGU1 Clk2-203ENSMUST00000121931 2112 ntAPPRIS ALT1 TSL 5 BASIC25.46■■□□□ 1.67
Calcoco1Q8CGU1 Rnf220-212ENSMUST00000221654 1949 ntTSL 1 (best) BASIC25.46■■□□□ 1.67
Calcoco1Q8CGU1 Snta1-202ENSMUST00000109728 2131 ntAPPRIS P2 TSL 1 (best) BASIC25.45■■□□□ 1.66
Calcoco1Q8CGU1 Snta1-201ENSMUST00000028991 2125 ntAPPRIS ALT2 TSL 1 (best) BASIC25.45■■□□□ 1.66
Calcoco1Q8CGU1 Fcho2-203ENSMUST00000109403 1523 ntTSL 5 BASIC25.44■■□□□ 1.66
Calcoco1Q8CGU1 Fam220a-204ENSMUST00000119488 2202 ntTSL 1 (best) BASIC25.43■■□□□ 1.66
Calcoco1Q8CGU1 Fam220a-209ENSMUST00000200267 2202 ntAPPRIS P1 TSL 1 (best) BASIC25.43■■□□□ 1.66
Calcoco1Q8CGU1 Btf3-201ENSMUST00000022163 1091 ntTSL 1 (best) BASIC25.42■■□□□ 1.66
Calcoco1Q8CGU1 Hexdc-201ENSMUST00000038831 2378 ntAPPRIS ALT2 TSL 5 BASIC25.41■■□□□ 1.66
Calcoco1Q8CGU1 Srp9-202ENSMUST00000111018 823 ntTSL 1 (best) BASIC25.41■■□□□ 1.66
Calcoco1Q8CGU1 Pfdn2-202ENSMUST00000135941 1735 ntAPPRIS P1 TSL 1 (best) BASIC25.4■■□□□ 1.66
Calcoco1Q8CGU1 Ywhah-201ENSMUST00000019109 1764 ntAPPRIS P1 TSL 1 (best) BASIC25.4■■□□□ 1.66
Calcoco1Q8CGU1 Dapk3-209ENSMUST00000219850 1482 ntAPPRIS P1 TSL 1 (best) BASIC25.4■■□□□ 1.66
Calcoco1Q8CGU1 Peli2-204ENSMUST00000226513 1320 ntBASIC25.39■■□□□ 1.66
Calcoco1Q8CGU1 Ubp1-203ENSMUST00000116492 2111 ntAPPRIS ALT1 TSL 1 (best) BASIC25.39■■□□□ 1.65
Calcoco1Q8CGU1 Ebag9-203ENSMUST00000227691 1945 ntAPPRIS P1 BASIC25.37■■□□□ 1.65
Calcoco1Q8CGU1 Gm45716-202ENSMUST00000134929 2031 ntAPPRIS P1 TSL 1 (best) BASIC25.36■■□□□ 1.65
Calcoco1Q8CGU1 Rab22a-202ENSMUST00000109110 849 ntTSL 5 BASIC25.36■■□□□ 1.65
Calcoco1Q8CGU1 Raly-201ENSMUST00000029120 1802 ntAPPRIS ALT2 TSL 5 BASIC25.35■■□□□ 1.65
Calcoco1Q8CGU1 Crlf1-201ENSMUST00000008032 1644 ntAPPRIS P1 TSL 1 (best) BASIC25.35■■□□□ 1.65
Calcoco1Q8CGU1 Vstm2l-201ENSMUST00000109523 1363 ntAPPRIS P1 TSL 5 BASIC25.34■■□□□ 1.65
Calcoco1Q8CGU1 Ica1-201ENSMUST00000038403 2075 ntAPPRIS P2 TSL 1 (best) BASIC25.34■■□□□ 1.65
Calcoco1Q8CGU1 Gm26566-201ENSMUST00000181601 1038 ntAPPRIS P1 BASIC25.34■■□□□ 1.65
Calcoco1Q8CGU1 Gas2l1-201ENSMUST00000037146 2686 ntAPPRIS ALT2 TSL 1 (best) BASIC25.34■■□□□ 1.65
Calcoco1Q8CGU1 Syt7-201ENSMUST00000073899 1605 ntAPPRIS P1 TSL 1 (best) BASIC25.33■■□□□ 1.65
Calcoco1Q8CGU1 Exosc6-201ENSMUST00000210390 1326 ntAPPRIS P1 BASIC25.32■■□□□ 1.64
Calcoco1Q8CGU1 Ssbp3-203ENSMUST00000097934 1742 ntAPPRIS ALT2 TSL 5 BASIC25.32■■□□□ 1.64
Retrieved 100 of 76,532 protein–RNA pairs in 30.2 ms