Protein–RNA interactions for Protein: Q8CDY9

Pcdhb7, Protocadherin beta 7, mousemouse

Predictions only

Length 829 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb7Q8CDY9 Lmo2-201ENSMUST00000111139 1434 ntTSL 5 BASIC25.13■■□□□ 1.61
Pcdhb7Q8CDY9 Ring1-201ENSMUST00000025183 2034 ntAPPRIS P1 TSL 1 (best) BASIC25.12■■□□□ 1.61
Pcdhb7Q8CDY9 Cnnm3-201ENSMUST00000001166 5193 ntAPPRIS P4 TSL 1 (best) BASIC25.11■■□□□ 1.61
Pcdhb7Q8CDY9 Ric1-206ENSMUST00000162184 2157 ntTSL 1 (best) BASIC25.1■■□□□ 1.61
Pcdhb7Q8CDY9 Exosc6-201ENSMUST00000210390 1326 ntAPPRIS P1 BASIC25.09■■□□□ 1.61
Pcdhb7Q8CDY9 Reep6-203ENSMUST00000105355 2127 ntAPPRIS ALT2 TSL 1 (best) BASIC25.09■■□□□ 1.61
Pcdhb7Q8CDY9 Reep6-204ENSMUST00000105357 2127 ntTSL 1 (best) BASIC25.09■■□□□ 1.61
Pcdhb7Q8CDY9 Nucks1-203ENSMUST00000189946 2375 ntAPPRIS ALT2 TSL 1 (best) BASIC25.08■■□□□ 1.61
Pcdhb7Q8CDY9 Fbll1-201ENSMUST00000160726 1503 ntAPPRIS P1 BASIC25.07■■□□□ 1.6
Pcdhb7Q8CDY9 Vsig8-202ENSMUST00000177086 1519 ntTSL 1 (best) BASIC25.07■■□□□ 1.6
Pcdhb7Q8CDY9 Dnttip1-202ENSMUST00000109326 476 ntTSL 1 (best) BASIC25.07■■□□□ 1.6
Pcdhb7Q8CDY9 Hnrnpd-202ENSMUST00000072750 1537 ntAPPRIS ALT2 TSL 3 BASIC25.07■■□□□ 1.6
Pcdhb7Q8CDY9 Gm45716-202ENSMUST00000134929 2031 ntAPPRIS P1 TSL 1 (best) BASIC25.06■■□□□ 1.6
Pcdhb7Q8CDY9 Fcnaos-201ENSMUST00000127642 1351 ntTSL 1 (best) BASIC25.05■■□□□ 1.6
Pcdhb7Q8CDY9 Ppp1r3e-202ENSMUST00000177403 1957 ntAPPRIS P1 TSL 5 BASIC25.05■■□□□ 1.6
Pcdhb7Q8CDY9 Srp9-202ENSMUST00000111018 823 ntTSL 1 (best) BASIC25.05■■□□□ 1.6
Pcdhb7Q8CDY9 Cgref1-201ENSMUST00000031051 1442 ntAPPRIS P1 TSL 1 (best) BASIC25.04■■□□□ 1.6
Pcdhb7Q8CDY9 Paip1-203ENSMUST00000126957 1731 ntTSL 5 BASIC25.04■■□□□ 1.6
Pcdhb7Q8CDY9 Mkrn1-203ENSMUST00000114822 751 ntTSL 1 (best) BASIC25.04■■□□□ 1.6
Pcdhb7Q8CDY9 Ubl4a-207ENSMUST00000178691 1038 ntAPPRIS P1 TSL 2 BASIC25.04■■□□□ 1.6
Pcdhb7Q8CDY9 Orai1-201ENSMUST00000051016 1482 ntAPPRIS P1 TSL 1 (best) BASIC25.03■■□□□ 1.6
Pcdhb7Q8CDY9 Gnas-207ENSMUST00000109085 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC25.03■■□□□ 1.6
Pcdhb7Q8CDY9 Ywhah-201ENSMUST00000019109 1764 ntAPPRIS P1 TSL 1 (best) BASIC25.03■■□□□ 1.6
Pcdhb7Q8CDY9 Micu3-201ENSMUST00000068999 2219 ntAPPRIS P1 TSL 5 BASIC25.02■■□□□ 1.6
Pcdhb7Q8CDY9 Vstm2l-201ENSMUST00000109523 1363 ntAPPRIS P1 TSL 5 BASIC25.02■■□□□ 1.6
Pcdhb7Q8CDY9 Coq10a-207ENSMUST00000220227 1434 ntAPPRIS ALT2 TSL 5 BASIC25.02■■□□□ 1.6
Pcdhb7Q8CDY9 Ranbp1-202ENSMUST00000115645 1085 ntAPPRIS P1 TSL 1 (best) BASIC25■■□□□ 1.59
Pcdhb7Q8CDY9 Smad7-202ENSMUST00000168918 1882 ntAPPRIS P1 TSL 1 (best) BASIC25■■□□□ 1.59
Pcdhb7Q8CDY9 Gm5601-202ENSMUST00000207161 1437 ntTSL 1 (best) BASIC24.98■■□□□ 1.59
Pcdhb7Q8CDY9 Ebag9-203ENSMUST00000227691 1945 ntAPPRIS P1 BASIC24.98■■□□□ 1.59
Pcdhb7Q8CDY9 Trp53rkb-202ENSMUST00000065753 1375 ntTSL 1 (best) BASIC24.97■■□□□ 1.59
Pcdhb7Q8CDY9 Gm16148-201ENSMUST00000119653 893 ntBASIC24.97■■□□□ 1.59
Pcdhb7Q8CDY9 Galnt10-202ENSMUST00000108846 1745 ntTSL 1 (best) BASIC24.97■■□□□ 1.59
Pcdhb7Q8CDY9 Yif1b-202ENSMUST00000108237 1086 ntTSL 5 BASIC24.96■■□□□ 1.59
Pcdhb7Q8CDY9 Fam136a-201ENSMUST00000071492 1643 ntAPPRIS P1 TSL 1 (best) BASIC24.96■■□□□ 1.59
Pcdhb7Q8CDY9 Cnnm3-202ENSMUST00000097776 5292 ntAPPRIS ALT2 TSL 1 (best) BASIC24.96■■□□□ 1.59
Pcdhb7Q8CDY9 Ube2m-201ENSMUST00000005714 1472 ntAPPRIS P1 TSL 1 (best) BASIC24.96■■□□□ 1.59
Pcdhb7Q8CDY9 Hoxa13-203ENSMUST00000147595 2395 ntAPPRIS P5 TSL 5 BASIC24.95■■□□□ 1.59
Pcdhb7Q8CDY9 Mef2a-201ENSMUST00000032776 2476 ntAPPRIS P1 TSL 1 (best) BASIC24.95■■□□□ 1.58
Pcdhb7Q8CDY9 Cldnd1-201ENSMUST00000023426 2147 ntAPPRIS P1 TSL 1 (best) BASIC24.95■■□□□ 1.58
Pcdhb7Q8CDY9 Tmem189-201ENSMUST00000006587 2329 ntAPPRIS P1 TSL 1 (best) BASIC24.95■■□□□ 1.58
Pcdhb7Q8CDY9 Rab2a-201ENSMUST00000060232 2133 ntAPPRIS P1 TSL 1 (best) BASIC24.94■■□□□ 1.58
Pcdhb7Q8CDY9 Sec63-201ENSMUST00000019937 6032 ntAPPRIS P1 TSL 1 (best) BASIC24.94■■□□□ 1.58
Pcdhb7Q8CDY9 E330040D14Rik-201ENSMUST00000192299 1374 ntBASIC24.93■■□□□ 1.58
Pcdhb7Q8CDY9 Ube2f-202ENSMUST00000171112 1547 ntAPPRIS P1 TSL 1 (best) BASIC24.93■■□□□ 1.58
Pcdhb7Q8CDY9 Maz-202ENSMUST00000205461 796 ntTSL 5 BASIC24.93■■□□□ 1.58
Pcdhb7Q8CDY9 AI837181-202ENSMUST00000159759 1515 ntAPPRIS P1 TSL 1 (best) BASIC24.92■■□□□ 1.58
Pcdhb7Q8CDY9 Rtn2-201ENSMUST00000032559 1990 ntAPPRIS P3 TSL 1 (best) BASIC24.92■■□□□ 1.58
Pcdhb7Q8CDY9 Bok-201ENSMUST00000027499 1468 ntAPPRIS P1 TSL 1 (best) BASIC24.91■■□□□ 1.58
Pcdhb7Q8CDY9 Ctbp1-201ENSMUST00000079746 2279 ntAPPRIS P3 TSL 1 (best) BASIC24.91■■□□□ 1.58
Pcdhb7Q8CDY9 A530058N18Rik-201ENSMUST00000128469 646 ntTSL 2 BASIC24.91■■□□□ 1.58
Pcdhb7Q8CDY9 Gm43445-201ENSMUST00000198564 2091 ntBASIC24.9■■□□□ 1.58
Pcdhb7Q8CDY9 Akt1s1-202ENSMUST00000107880 1757 ntAPPRIS P3 TSL 1 (best) BASIC24.9■■□□□ 1.58
Pcdhb7Q8CDY9 Sh3glb2-203ENSMUST00000113620 1694 ntTSL 1 (best) BASIC24.89■■□□□ 1.58
Pcdhb7Q8CDY9 Gsk3a-201ENSMUST00000071739 2260 ntAPPRIS P2 TSL 2 BASIC24.86■■□□□ 1.57
Pcdhb7Q8CDY9 Ankrd28-201ENSMUST00000014640 6712 ntAPPRIS P2 TSL 1 (best) BASIC24.85■■□□□ 1.57
Pcdhb7Q8CDY9 Gm5814-201ENSMUST00000177586 378 ntAPPRIS P1 BASIC24.85■■□□□ 1.57
Pcdhb7Q8CDY9 Ppp1r14c-202ENSMUST00000217573 2013 ntTSL 1 (best) BASIC24.85■■□□□ 1.57
Pcdhb7Q8CDY9 Nrep-202ENSMUST00000168890 2185 ntAPPRIS P1 TSL 1 (best) BASIC24.84■■□□□ 1.57
Pcdhb7Q8CDY9 Bok-205ENSMUST00000201863 883 ntAPPRIS P1 TSL 5 BASIC24.84■■□□□ 1.57
Pcdhb7Q8CDY9 Gjc1-201ENSMUST00000068933 1903 ntAPPRIS P1 TSL 1 (best) BASIC24.83■■□□□ 1.57
Pcdhb7Q8CDY9 Ttc19-202ENSMUST00000101075 2193 ntAPPRIS ALT2 TSL 1 (best) BASIC24.82■■□□□ 1.56
Pcdhb7Q8CDY9 En1-201ENSMUST00000079721 2624 ntAPPRIS P1 TSL 1 (best) BASIC24.82■■□□□ 1.56
Pcdhb7Q8CDY9 Eif4e2-203ENSMUST00000113230 1569 ntTSL 1 (best) BASIC24.81■■□□□ 1.56
Pcdhb7Q8CDY9 Phlda1-201ENSMUST00000164773 1949 ntAPPRIS P1 TSL 1 (best) BASIC24.81■■□□□ 1.56
Pcdhb7Q8CDY9 Gm7334-201ENSMUST00000061681 1356 ntAPPRIS P1 BASIC24.8■■□□□ 1.56
Pcdhb7Q8CDY9 Raly-201ENSMUST00000029120 1802 ntAPPRIS ALT2 TSL 5 BASIC24.8■■□□□ 1.56
Pcdhb7Q8CDY9 Kdm2a-203ENSMUST00000116571 2413 ntTSL 1 (best) BASIC24.8■■□□□ 1.56
Pcdhb7Q8CDY9 Rnf220-212ENSMUST00000221654 1949 ntTSL 1 (best) BASIC24.8■■□□□ 1.56
Pcdhb7Q8CDY9 Zfp787-201ENSMUST00000094870 1897 ntAPPRIS P1 TSL 1 (best) BASIC24.79■■□□□ 1.56
Pcdhb7Q8CDY9 Cebpb-201ENSMUST00000070642 1504 ntAPPRIS P1 BASIC24.79■■□□□ 1.56
Pcdhb7Q8CDY9 Arl2bp-201ENSMUST00000034228 2063 ntAPPRIS P1 TSL 1 (best) BASIC24.77■■□□□ 1.56
Pcdhb7Q8CDY9 Gm30346-201ENSMUST00000218641 1699 ntBASIC24.77■■□□□ 1.56
Pcdhb7Q8CDY9 Plekha3-201ENSMUST00000111920 2534 ntAPPRIS P1 TSL 1 (best) BASIC24.77■■□□□ 1.56
Pcdhb7Q8CDY9 Cbln1-201ENSMUST00000034076 2800 ntAPPRIS P1 TSL 1 (best) BASIC24.76■■□□□ 1.55
Pcdhb7Q8CDY9 Ildr2-205ENSMUST00000193860 2320 ntTSL 1 (best) BASIC24.76■■□□□ 1.55
Pcdhb7Q8CDY9 Htra4-201ENSMUST00000084031 2180 ntAPPRIS P1 TSL 1 (best) BASIC24.74■■□□□ 1.55
Pcdhb7Q8CDY9 Gm266-201ENSMUST00000010673 1215 ntAPPRIS P1 BASIC24.73■■□□□ 1.55
Pcdhb7Q8CDY9 Pfdn2-202ENSMUST00000135941 1735 ntAPPRIS P1 TSL 1 (best) BASIC24.72■■□□□ 1.55
Pcdhb7Q8CDY9 Mrps7-201ENSMUST00000058109 1962 ntAPPRIS P1 TSL 1 (best) BASIC24.72■■□□□ 1.55
Pcdhb7Q8CDY9 Ssx2ip-202ENSMUST00000106149 2416 ntAPPRIS ALT2 TSL 1 (best) BASIC24.72■■□□□ 1.55
Pcdhb7Q8CDY9 Gm6345-201ENSMUST00000180378 1691 ntBASIC24.72■■□□□ 1.55
Pcdhb7Q8CDY9 Hmx1-201ENSMUST00000087674 1526 ntAPPRIS P1 TSL 1 (best) BASIC24.71■■□□□ 1.55
Pcdhb7Q8CDY9 Runx3-202ENSMUST00000119564 1855 ntAPPRIS ALT2 TSL 1 (best) BASIC24.71■■□□□ 1.55
Pcdhb7Q8CDY9 Macrod2-205ENSMUST00000110063 845 ntTSL 5 BASIC24.7■■□□□ 1.54
Pcdhb7Q8CDY9 Susd4-202ENSMUST00000153348 1898 ntAPPRIS P1 TSL 5 BASIC24.69■■□□□ 1.54
Pcdhb7Q8CDY9 Irf2bp2-201ENSMUST00000054960 5080 ntAPPRIS P1 TSL 2 BASIC24.69■■□□□ 1.54
Pcdhb7Q8CDY9 Amer2-203ENSMUST00000225247 2662 ntBASIC24.68■■□□□ 1.54
Pcdhb7Q8CDY9 Gm42984-201ENSMUST00000195990 987 ntTSL 1 (best) BASIC24.68■■□□□ 1.54
Pcdhb7Q8CDY9 Ywhaq-202ENSMUST00000103002 2110 ntAPPRIS P1 TSL 1 (best) BASIC24.68■■□□□ 1.54
Pcdhb7Q8CDY9 Cds2-203ENSMUST00000110158 1247 ntTSL 1 (best) BASIC24.65■■□□□ 1.54
Pcdhb7Q8CDY9 6530409C15Rik-202ENSMUST00000143551 1573 ntTSL 1 (best) BASIC24.65■■□□□ 1.54
Pcdhb7Q8CDY9 2210008F06Rik-201ENSMUST00000180805 1082 ntTSL 1 (best) BASIC24.65■■□□□ 1.54
Pcdhb7Q8CDY9 Srsf9-201ENSMUST00000031513 1162 ntAPPRIS P1 TSL 1 (best) BASIC24.64■■□□□ 1.54
Pcdhb7Q8CDY9 Sowahd-201ENSMUST00000060057 1574 ntAPPRIS P1 BASIC24.63■■□□□ 1.53
Pcdhb7Q8CDY9 Guf1-201ENSMUST00000031113 1769 ntTSL 1 (best) BASIC24.63■■□□□ 1.53
Pcdhb7Q8CDY9 Zfp91-201ENSMUST00000038627 5531 ntAPPRIS P1 TSL 1 (best) BASIC24.62■■□□□ 1.53
Pcdhb7Q8CDY9 Mfsd5-201ENSMUST00000051341 1742 ntAPPRIS P1 TSL 1 (best) BASIC24.62■■□□□ 1.53
Pcdhb7Q8CDY9 Fam60a-203ENSMUST00000111562 906 ntAPPRIS P1 TSL 3 BASIC24.62■■□□□ 1.53
Pcdhb7Q8CDY9 Dapk3-202ENSMUST00000178422 1730 ntAPPRIS P1 TSL 1 (best) BASIC24.61■■□□□ 1.53
Retrieved 100 of 76,532 protein–RNA pairs in 10.4 ms