Protein–RNA interactions for Protein: Q8C7E9

Cstf2t, Cleavage stimulation factor subunit 2 tau variant, mousemouse

Known RBP Predictions only

Length 632 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cstf2tQ8C7E9 Kras-207ENSMUST00000203147 817 ntTSL 5 BASIC26.14■■□□□ 1.78
Cstf2tQ8C7E9 Vsig8-201ENSMUST00000061835 1801 ntAPPRIS P1 TSL 1 (best) BASIC26.12■■□□□ 1.77
Cstf2tQ8C7E9 Mipep-204ENSMUST00000225043 1548 ntBASIC26.12■■□□□ 1.77
Cstf2tQ8C7E9 Rnf215-201ENSMUST00000003677 1874 ntAPPRIS P1 TSL 1 (best) BASIC26.09■■□□□ 1.77
Cstf2tQ8C7E9 St3gal5-201ENSMUST00000069994 2258 ntAPPRIS P3 TSL 1 (best) BASIC26.08■■□□□ 1.77
Cstf2tQ8C7E9 1700003F12Rik-202ENSMUST00000109709 704 ntAPPRIS ALT2 TSL 3 BASIC26.07■■□□□ 1.76
Cstf2tQ8C7E9 Pard6a-203ENSMUST00000211888 1179 ntTSL 1 (best) BASIC26.07■■□□□ 1.76
Cstf2tQ8C7E9 1700003F12Rik-201ENSMUST00000045116 704 ntAPPRIS P2 TSL 1 (best) BASIC26.07■■□□□ 1.76
Cstf2tQ8C7E9 Gm26859-201ENSMUST00000181743 1852 ntTSL 5 BASIC26.06■■□□□ 1.76
Cstf2tQ8C7E9 Tmeff1-201ENSMUST00000030032 2461 ntAPPRIS P1 TSL 1 (best) BASIC26.04■■□□□ 1.76
Cstf2tQ8C7E9 Tcte3-201ENSMUST00000040746 788 ntAPPRIS P1 TSL 1 (best) BASIC26.03■■□□□ 1.76
Cstf2tQ8C7E9 Tcte3-202ENSMUST00000097398 632 ntTSL 1 (best) BASIC26.03■■□□□ 1.76
Cstf2tQ8C7E9 Jdp2-203ENSMUST00000177587 1645 ntAPPRIS P1 TSL 1 (best) BASIC26.03■■□□□ 1.76
Cstf2tQ8C7E9 Znrf3-202ENSMUST00000143746 1022 ntTSL 1 (best) BASIC26.01■■□□□ 1.75
Cstf2tQ8C7E9 Lrrc1-204ENSMUST00000183734 2113 ntTSL 1 (best) BASIC26■■□□□ 1.75
Cstf2tQ8C7E9 Snrpe-202ENSMUST00000164574 597 ntTSL 3 BASIC26■■□□□ 1.75
Cstf2tQ8C7E9 Ube2f-202ENSMUST00000171112 1547 ntAPPRIS P1 TSL 1 (best) BASIC25.99■■□□□ 1.75
Cstf2tQ8C7E9 Uba52-205ENSMUST00000129909 705 ntAPPRIS P1 TSL 2 BASIC25.99■■□□□ 1.75
Cstf2tQ8C7E9 Gm11529-201ENSMUST00000153012 639 ntTSL 1 (best) BASIC25.99■■□□□ 1.75
Cstf2tQ8C7E9 Dlx4-201ENSMUST00000021241 2282 ntAPPRIS P1 TSL 1 (best) BASIC25.98■■□□□ 1.75
Cstf2tQ8C7E9 Junos-204ENSMUST00000128094 830 ntTSL 1 (best) BASIC25.98■■□□□ 1.75
Cstf2tQ8C7E9 Ube2q2-202ENSMUST00000121677 1680 ntAPPRIS ALT2 TSL 5 BASIC25.98■■□□□ 1.75
Cstf2tQ8C7E9 1700084E18Rik-202ENSMUST00000205624 729 ntBASIC25.97■■□□□ 1.75
Cstf2tQ8C7E9 Hrh3-208ENSMUST00000171736 906 ntTSL 5 BASIC25.96■■□□□ 1.75
Cstf2tQ8C7E9 Tbcel-204ENSMUST00000128959 1535 ntAPPRIS P1 TSL 5 BASIC25.96■■□□□ 1.75
Cstf2tQ8C7E9 Lmo2-201ENSMUST00000111139 1434 ntTSL 5 BASIC25.96■■□□□ 1.75
Cstf2tQ8C7E9 Twist1-201ENSMUST00000049089 1628 ntAPPRIS P1 TSL 1 (best) BASIC25.96■■□□□ 1.75
Cstf2tQ8C7E9 Mtm1-204ENSMUST00000101501 770 ntTSL 1 (best) BASIC25.93■■□□□ 1.74
Cstf2tQ8C7E9 Gm31266-201ENSMUST00000192060 656 ntTSL 5 BASIC25.93■■□□□ 1.74
Cstf2tQ8C7E9 Cadm4-201ENSMUST00000068023 2161 ntAPPRIS P1 TSL 1 (best) BASIC25.92■■□□□ 1.74
Cstf2tQ8C7E9 Abhd17a-201ENSMUST00000003436 1468 ntAPPRIS P1 TSL 1 (best) BASIC25.89■■□□□ 1.73
Cstf2tQ8C7E9 Gm527-201ENSMUST00000058135 1468 ntAPPRIS P1 TSL 1 (best) BASIC25.89■■□□□ 1.73
Cstf2tQ8C7E9 Gfra4-203ENSMUST00000110234 600 ntTSL 1 (best) BASIC25.88■■□□□ 1.73
Cstf2tQ8C7E9 Gfra4-204ENSMUST00000110235 573 ntTSL 1 (best) BASIC25.88■■□□□ 1.73
Cstf2tQ8C7E9 Asf1a-205ENSMUST00000219282 1150 ntTSL 5 BASIC25.88■■□□□ 1.73
Cstf2tQ8C7E9 Hnrnpd-202ENSMUST00000072750 1537 ntAPPRIS ALT2 TSL 3 BASIC25.88■■□□□ 1.73
Cstf2tQ8C7E9 Dapk3-209ENSMUST00000219850 1482 ntAPPRIS P1 TSL 1 (best) BASIC25.87■■□□□ 1.73
Cstf2tQ8C7E9 Gm42809-201ENSMUST00000198429 1138 ntBASIC25.87■■□□□ 1.73
Cstf2tQ8C7E9 Ctbp1-206ENSMUST00000201575 2091 ntTSL 1 (best) BASIC25.86■■□□□ 1.73
Cstf2tQ8C7E9 Tmbim4-204ENSMUST00000134797 486 ntTSL 1 (best) BASIC25.85■■□□□ 1.73
Cstf2tQ8C7E9 Rpia-201ENSMUST00000066134 1829 ntAPPRIS P1 TSL 1 (best) BASIC25.84■■□□□ 1.73
Cstf2tQ8C7E9 Nrg3-202ENSMUST00000168810 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC25.84■■□□□ 1.73
Cstf2tQ8C7E9 Ap1ar-210ENSMUST00000200409 2580 ntTSL 5 BASIC25.84■■□□□ 1.73
Cstf2tQ8C7E9 Fbll1-201ENSMUST00000160726 1503 ntAPPRIS P1 BASIC25.83■■□□□ 1.73
Cstf2tQ8C7E9 Dennd1b-209ENSMUST00000200533 1853 ntTSL 1 (best) BASIC25.83■■□□□ 1.73
Cstf2tQ8C7E9 Hoxd8-201ENSMUST00000019749 2634 ntAPPRIS P3 TSL 1 (best) BASIC25.82■■□□□ 1.72
Cstf2tQ8C7E9 Vsig8-202ENSMUST00000177086 1519 ntTSL 1 (best) BASIC25.82■■□□□ 1.72
Cstf2tQ8C7E9 A830010M20Rik-202ENSMUST00000094541 1134 ntTSL 5 BASIC25.81■■□□□ 1.72
Cstf2tQ8C7E9 Gm11175-201ENSMUST00000116172 543 ntBASIC25.8■■□□□ 1.72
Cstf2tQ8C7E9 Gm43863-201ENSMUST00000203822 1192 ntBASIC25.8■■□□□ 1.72
Cstf2tQ8C7E9 Orai1-202ENSMUST00000121652 1875 ntAPPRIS P1 TSL 1 (best) BASIC25.8■■□□□ 1.72
Cstf2tQ8C7E9 Tnfsf12-202ENSMUST00000181810 1435 ntAPPRIS P1 TSL 1 (best) BASIC25.79■■□□□ 1.72
Cstf2tQ8C7E9 Rnd2-201ENSMUST00000001347 1394 ntAPPRIS P1 TSL 1 (best) BASIC25.78■■□□□ 1.72
Cstf2tQ8C7E9 Fam196a-201ENSMUST00000171394 2490 ntAPPRIS P1 TSL 5 BASIC25.78■■□□□ 1.72
Cstf2tQ8C7E9 Slc30a2-203ENSMUST00000105873 1224 ntTSL 5 BASIC25.77■■□□□ 1.72
Cstf2tQ8C7E9 Cadm1-210ENSMUST00000214542 899 ntTSL 1 (best) BASIC25.76■■□□□ 1.71
Cstf2tQ8C7E9 Gas1-202ENSMUST00000223933 1155 ntAPPRIS P2 BASIC25.76■■□□□ 1.71
Cstf2tQ8C7E9 Cap2-205ENSMUST00000225824 1634 ntBASIC25.76■■□□□ 1.71
Cstf2tQ8C7E9 Ccdc9-202ENSMUST00000118976 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC25.76■■□□□ 1.71
Cstf2tQ8C7E9 Cdv3-205ENSMUST00000189896 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC25.75■■□□□ 1.71
Cstf2tQ8C7E9 Bod1-202ENSMUST00000109415 799 ntAPPRIS P1 TSL 2 BASIC25.73■■□□□ 1.71
Cstf2tQ8C7E9 Gm20402-201ENSMUST00000174738 687 ntTSL 3 BASIC25.73■■□□□ 1.71
Cstf2tQ8C7E9 Nemp1-202ENSMUST00000118612 1522 ntTSL 1 (best) BASIC25.73■■□□□ 1.71
Cstf2tQ8C7E9 Sowahd-201ENSMUST00000060057 1574 ntAPPRIS P1 BASIC25.72■■□□□ 1.71
Cstf2tQ8C7E9 Reps1-206ENSMUST00000154718 2402 ntTSL 5 BASIC25.72■■□□□ 1.71
Cstf2tQ8C7E9 Stard3nl-201ENSMUST00000039694 1327 ntAPPRIS P1 TSL 1 (best) BASIC25.71■■□□□ 1.71
Cstf2tQ8C7E9 Gskip-202ENSMUST00000222284 1064 ntTSL 1 (best) BASIC25.71■■□□□ 1.71
Cstf2tQ8C7E9 Dhrs13-203ENSMUST00000122342 1791 ntTSL 1 (best) BASIC25.71■■□□□ 1.71
Cstf2tQ8C7E9 E330040D14Rik-201ENSMUST00000192299 1374 ntBASIC25.7■■□□□ 1.71
Cstf2tQ8C7E9 1110008P14Rik-201ENSMUST00000048792 680 ntAPPRIS P1 TSL 1 (best) BASIC25.7■■□□□ 1.7
Cstf2tQ8C7E9 Stard10-203ENSMUST00000164479 1375 ntAPPRIS P1 TSL 1 (best) BASIC25.69■■□□□ 1.7
Cstf2tQ8C7E9 Snx24-202ENSMUST00000165032 1880 ntAPPRIS P1 TSL 1 (best) BASIC25.69■■□□□ 1.7
Cstf2tQ8C7E9 Glrx2-205ENSMUST00000145571 758 ntTSL 2 BASIC25.69■■□□□ 1.7
Cstf2tQ8C7E9 2310050C09Rik-201ENSMUST00000163439 1078 ntAPPRIS P1 TSL 2 BASIC25.69■■□□□ 1.7
Cstf2tQ8C7E9 Pcbd2-201ENSMUST00000021958 544 ntTSL 1 (best) BASIC25.69■■□□□ 1.7
Cstf2tQ8C7E9 Igfbp7-201ENSMUST00000046746 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC25.69■■□□□ 1.7
Cstf2tQ8C7E9 Mir6538-201ENSMUST00000183713 110 ntBASIC25.68■■□□□ 1.7
Cstf2tQ8C7E9 Gm7432-201ENSMUST00000210343 879 ntBASIC25.68■■□□□ 1.7
Cstf2tQ8C7E9 Bckdhb-206ENSMUST00000190637 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC25.67■■□□□ 1.7
Cstf2tQ8C7E9 Hmgn3-202ENSMUST00000162246 983 ntAPPRIS P4 TSL 1 (best) BASIC25.67■■□□□ 1.7
Cstf2tQ8C7E9 A530058N18Rik-204ENSMUST00000141209 709 ntTSL 5 BASIC25.66■■□□□ 1.7
Cstf2tQ8C7E9 Shf-201ENSMUST00000048635 1431 ntAPPRIS P2 TSL 1 (best) BASIC25.65■■□□□ 1.7
Cstf2tQ8C7E9 Sntb1-202ENSMUST00000110200 1225 ntTSL 1 (best) BASIC25.64■■□□□ 1.7
Cstf2tQ8C7E9 Phlda3-201ENSMUST00000038945 1435 ntAPPRIS P1 TSL 1 (best) BASIC25.63■■□□□ 1.69
Cstf2tQ8C7E9 E130304I02Rik-202ENSMUST00000187873 696 ntTSL 1 (best) BASIC25.61■■□□□ 1.69
Cstf2tQ8C7E9 Dbp-204ENSMUST00000211513 1156 ntTSL 5 BASIC25.59■■□□□ 1.69
Cstf2tQ8C7E9 1110065P20Rik-201ENSMUST00000106190 968 ntAPPRIS P1 TSL 2 BASIC25.58■■□□□ 1.69
Cstf2tQ8C7E9 Ranbp1-202ENSMUST00000115645 1085 ntAPPRIS P1 TSL 1 (best) BASIC25.58■■□□□ 1.69
Cstf2tQ8C7E9 Bckdhb-201ENSMUST00000034801 1472 ntAPPRIS P3 TSL 1 (best) BASIC25.57■■□□□ 1.68
Cstf2tQ8C7E9 Iscu-203ENSMUST00000112312 1116 ntTSL 5 BASIC25.56■■□□□ 1.68
Cstf2tQ8C7E9 6530409C15Rik-202ENSMUST00000143551 1573 ntTSL 1 (best) BASIC25.55■■□□□ 1.68
Cstf2tQ8C7E9 Nkain2-201ENSMUST00000092602 558 ntBASIC25.54■■□□□ 1.68
Cstf2tQ8C7E9 Ppp4c-211ENSMUST00000206570 1400 ntAPPRIS P1 TSL 1 (best) BASIC25.54■■□□□ 1.68
Cstf2tQ8C7E9 Gnai2-201ENSMUST00000055704 2215 ntAPPRIS P1 TSL 1 (best) BASIC25.53■■□□□ 1.68
Cstf2tQ8C7E9 Gm15039-201ENSMUST00000118914 875 ntBASIC25.53■■□□□ 1.68
Cstf2tQ8C7E9 Dleu2-206ENSMUST00000182537 318 ntTSL 2 BASIC25.51■■□□□ 1.67
Cstf2tQ8C7E9 Rab4b-201ENSMUST00000093040 1192 ntAPPRIS P1 TSL 1 (best) BASIC25.51■■□□□ 1.67
Cstf2tQ8C7E9 Kmt5a-202ENSMUST00000100709 1425 ntTSL 1 (best) BASIC25.51■■□□□ 1.67
Cstf2tQ8C7E9 Fcho2-203ENSMUST00000109403 1523 ntTSL 5 BASIC25.51■■□□□ 1.67
Cstf2tQ8C7E9 Rpl31-203ENSMUST00000179954 630 ntAPPRIS P1 TSL 1 (best) BASIC25.5■■□□□ 1.67
Retrieved 100 of 76,532 protein–RNA pairs in 15.1 ms