Protein–RNA interactions for Protein: Q8C5N3

Cwc22, Pre-mRNA-splicing factor CWC22 homolog, mousemouse

Known RBP Predictions only

Length 908 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cwc22Q8C5N3 Gnas-207ENSMUST00000109085 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC35.57■■■■□ 3.28
Cwc22Q8C5N3 Gm42984-201ENSMUST00000195990 987 ntTSL 1 (best) BASIC35.56■■■■□ 3.28
Cwc22Q8C5N3 Phlda1-201ENSMUST00000164773 1949 ntAPPRIS P1 TSL 1 (best) BASIC35.53■■■■□ 3.28
Cwc22Q8C5N3 2210008F06Rik-201ENSMUST00000180805 1082 ntTSL 1 (best) BASIC35.53■■■■□ 3.28
Cwc22Q8C5N3 Ring1-201ENSMUST00000025183 2034 ntAPPRIS P1 TSL 1 (best) BASIC35.53■■■■□ 3.28
Cwc22Q8C5N3 C530008M17Rik-201ENSMUST00000086909 1844 ntBASIC35.53■■■■□ 3.28
Cwc22Q8C5N3 Smad7-202ENSMUST00000168918 1882 ntAPPRIS P1 TSL 1 (best) BASIC35.5■■■■□ 3.27
Cwc22Q8C5N3 Akt1s1-202ENSMUST00000107880 1757 ntAPPRIS P3 TSL 1 (best) BASIC35.49■■■■□ 3.27
Cwc22Q8C5N3 Cnot6l-203ENSMUST00000122003 2089 ntTSL 1 (best) BASIC35.49■■■■□ 3.27
Cwc22Q8C5N3 Gm7334-201ENSMUST00000061681 1356 ntAPPRIS P1 BASIC35.48■■■■□ 3.27
Cwc22Q8C5N3 Gm45716-202ENSMUST00000134929 2031 ntAPPRIS P1 TSL 1 (best) BASIC35.47■■■■□ 3.27
Cwc22Q8C5N3 Ywhah-201ENSMUST00000019109 1764 ntAPPRIS P1 TSL 1 (best) BASIC35.46■■■■□ 3.27
Cwc22Q8C5N3 Gm5814-201ENSMUST00000177586 378 ntAPPRIS P1 BASIC35.45■■■■□ 3.27
Cwc22Q8C5N3 Fam60a-203ENSMUST00000111562 906 ntAPPRIS P1 TSL 3 BASIC35.44■■■■□ 3.26
Cwc22Q8C5N3 Cds2-203ENSMUST00000110158 1247 ntTSL 1 (best) BASIC35.42■■■■□ 3.26
Cwc22Q8C5N3 Gm30346-201ENSMUST00000218641 1699 ntBASIC35.42■■■■□ 3.26
Cwc22Q8C5N3 Noxo1-201ENSMUST00000019464 2238 ntAPPRIS P1 TSL 1 (best) BASIC35.41■■■■□ 3.26
Cwc22Q8C5N3 Ccdc122-202ENSMUST00000095625 1195 ntAPPRIS ALT2 TSL 1 (best) BASIC35.4■■■■□ 3.26
Cwc22Q8C5N3 Apcdd1-202ENSMUST00000163716 1888 ntAPPRIS P1 TSL 1 (best) BASIC35.39■■■■□ 3.26
Cwc22Q8C5N3 Eif4e2-203ENSMUST00000113230 1569 ntTSL 1 (best) BASIC35.38■■■■□ 3.25
Cwc22Q8C5N3 Tmeff1-201ENSMUST00000030032 2461 ntAPPRIS P1 TSL 1 (best) BASIC35.38■■■■□ 3.25
Cwc22Q8C5N3 Macrod2-205ENSMUST00000110063 845 ntTSL 5 BASIC35.37■■■■□ 3.25
Cwc22Q8C5N3 Hmx1-201ENSMUST00000087674 1526 ntAPPRIS P1 TSL 1 (best) BASIC35.36■■■■□ 3.25
Cwc22Q8C5N3 Sowahd-201ENSMUST00000060057 1574 ntAPPRIS P1 BASIC35.35■■■■□ 3.25
Cwc22Q8C5N3 Aard-201ENSMUST00000090025 1348 ntAPPRIS P1 TSL 1 (best) BASIC35.34■■■■□ 3.25
Cwc22Q8C5N3 Cebpb-201ENSMUST00000070642 1504 ntAPPRIS P1 BASIC35.34■■■■□ 3.25
Cwc22Q8C5N3 Zfp131-205ENSMUST00000223812 663 ntBASIC35.34■■■■□ 3.25
Cwc22Q8C5N3 CT030161.2-201ENSMUST00000218666 735 ntTSL 3 BASIC35.33■■■■□ 3.25
Cwc22Q8C5N3 6530409C15Rik-202ENSMUST00000143551 1573 ntTSL 1 (best) BASIC35.33■■■■□ 3.25
Cwc22Q8C5N3 Tmeff1-202ENSMUST00000123476 1224 ntAPPRIS P1 TSL 1 (best) BASIC35.32■■■■□ 3.24
Cwc22Q8C5N3 Hoxa13-203ENSMUST00000147595 2395 ntAPPRIS P5 TSL 5 BASIC35.31■■■■□ 3.24
Cwc22Q8C5N3 A530058N18Rik-207ENSMUST00000152254 1211 ntTSL 1 (best) BASIC35.31■■■■□ 3.24
Cwc22Q8C5N3 Slc16a6-203ENSMUST00000070872 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC35.31■■■■□ 3.24
Cwc22Q8C5N3 Gjc1-201ENSMUST00000068933 1903 ntAPPRIS P1 TSL 1 (best) BASIC35.3■■■■□ 3.24
Cwc22Q8C5N3 Hoxa13-201ENSMUST00000047993 1309 ntAPPRIS ALT2 TSL 5 BASIC35.28■■■■□ 3.24
Cwc22Q8C5N3 Gm10762-201ENSMUST00000099385 1133 ntAPPRIS P1 BASIC35.27■■■■□ 3.24
Cwc22Q8C5N3 Rnd2-201ENSMUST00000001347 1394 ntAPPRIS P1 TSL 1 (best) BASIC35.26■■■■□ 3.24
Cwc22Q8C5N3 AC153504.1-201ENSMUST00000218379 2290 ntBASIC35.25■■■■□ 3.23
Cwc22Q8C5N3 Ywhaz-204ENSMUST00000110362 2122 ntAPPRIS P1 TSL 1 (best) BASIC35.25■■■■□ 3.23
Cwc22Q8C5N3 Eif2ak3-204ENSMUST00000162950 927 ntTSL 1 (best) BASIC35.24■■■■□ 3.23
Cwc22Q8C5N3 Ebag9-203ENSMUST00000227691 1945 ntAPPRIS P1 BASIC35.24■■■■□ 3.23
Cwc22Q8C5N3 Ywhaq-202ENSMUST00000103002 2110 ntAPPRIS P1 TSL 1 (best) BASIC35.21■■■■□ 3.23
Cwc22Q8C5N3 Pard6a-205ENSMUST00000212430 1261 ntAPPRIS ALT1 TSL 1 (best) BASIC35.2■■■■□ 3.23
Cwc22Q8C5N3 Macrod1-201ENSMUST00000040261 1274 ntAPPRIS P1 TSL 1 (best) BASIC35.19■■■■□ 3.22
Cwc22Q8C5N3 Gm6345-201ENSMUST00000180378 1691 ntBASIC35.17■■■■□ 3.22
Cwc22Q8C5N3 Dmwd-201ENSMUST00000032570 2494 ntAPPRIS P2 TSL 1 (best) BASIC35.16■■■■□ 3.22
Cwc22Q8C5N3 Mrps7-201ENSMUST00000058109 1962 ntAPPRIS P1 TSL 1 (best) BASIC35.16■■■■□ 3.22
Cwc22Q8C5N3 Runx3-202ENSMUST00000119564 1855 ntAPPRIS ALT2 TSL 1 (best) BASIC35.15■■■■□ 3.22
Cwc22Q8C5N3 Susd4-202ENSMUST00000153348 1898 ntAPPRIS P1 TSL 5 BASIC35.13■■■■□ 3.21
Cwc22Q8C5N3 Mfsd5-201ENSMUST00000051341 1742 ntAPPRIS P1 TSL 1 (best) BASIC35.12■■■■□ 3.21
Cwc22Q8C5N3 1700069B07Rik-202ENSMUST00000191155 939 ntBASIC35.12■■■■□ 3.21
Cwc22Q8C5N3 Znrf3-202ENSMUST00000143746 1022 ntTSL 1 (best) BASIC35.11■■■■□ 3.21
Cwc22Q8C5N3 Ric1-206ENSMUST00000162184 2157 ntTSL 1 (best) BASIC35.11■■■■□ 3.21
Cwc22Q8C5N3 Ap1ar-210ENSMUST00000200409 2580 ntTSL 5 BASIC35.11■■■■□ 3.21
Cwc22Q8C5N3 Galnt10-202ENSMUST00000108846 1745 ntTSL 1 (best) BASIC35.1■■■■□ 3.21
Cwc22Q8C5N3 Tpst1-201ENSMUST00000040721 2050 ntAPPRIS P1 TSL 1 (best) BASIC35.09■■■■□ 3.21
Cwc22Q8C5N3 Pitpna-205ENSMUST00000179445 1665 ntAPPRIS ALT1 TSL 5 BASIC35.09■■■■□ 3.21
Cwc22Q8C5N3 Tcte2-204ENSMUST00000130033 1462 ntAPPRIS ALT2 TSL 1 (best) BASIC35.09■■■■□ 3.21
Cwc22Q8C5N3 1700016A09Rik-201ENSMUST00000192004 835 ntBASIC35.08■■■■□ 3.21
Cwc22Q8C5N3 Dapk3-202ENSMUST00000178422 1730 ntAPPRIS P1 TSL 1 (best) BASIC35.06■■■■□ 3.2
Cwc22Q8C5N3 Fbxo6-201ENSMUST00000030858 1346 ntAPPRIS P1 TSL 1 (best) BASIC35.03■■■■□ 3.2
Cwc22Q8C5N3 Guf1-201ENSMUST00000031113 1769 ntTSL 1 (best) BASIC35.02■■■■□ 3.2
Cwc22Q8C5N3 Tdp2-203ENSMUST00000223804 1136 ntBASIC35.01■■■■□ 3.2
Cwc22Q8C5N3 Gm527-201ENSMUST00000058135 1468 ntAPPRIS P1 TSL 1 (best) BASIC35.01■■■■□ 3.19
Cwc22Q8C5N3 Pradc1-202ENSMUST00000113770 610 ntTSL 1 (best) BASIC35■■■■□ 3.19
Cwc22Q8C5N3 Hrh3-208ENSMUST00000171736 906 ntTSL 5 BASIC35■■■■□ 3.19
Cwc22Q8C5N3 Traf4-201ENSMUST00000017530 2078 ntAPPRIS P1 TSL 1 (best) BASIC34.99■■■■□ 3.19
Cwc22Q8C5N3 Gltp-203ENSMUST00000112214 944 ntTSL 3 BASIC34.99■■■■□ 3.19
Cwc22Q8C5N3 Fam69b-201ENSMUST00000074240 1622 ntAPPRIS P1 TSL 1 (best) BASIC34.98■■■■□ 3.19
Cwc22Q8C5N3 Dazap1-203ENSMUST00000105362 2081 ntAPPRIS P3 TSL 1 (best) BASIC34.97■■■■□ 3.19
Cwc22Q8C5N3 Pdia5-201ENSMUST00000023550 1808 ntAPPRIS P1 TSL 1 (best) BASIC34.97■■■■□ 3.19
Cwc22Q8C5N3 Egr3-201ENSMUST00000035908 1509 ntAPPRIS ALT1 TSL 1 (best) BASIC34.97■■■■□ 3.19
Cwc22Q8C5N3 Dedd-201ENSMUST00000064950 1618 ntAPPRIS P1 TSL 1 (best) BASIC34.97■■■■□ 3.19
Cwc22Q8C5N3 Triobp-206ENSMUST00000130663 1660 ntAPPRIS ALT2 TSL 5 BASIC34.97■■■■□ 3.19
Cwc22Q8C5N3 Pfdn2-202ENSMUST00000135941 1735 ntAPPRIS P1 TSL 1 (best) BASIC34.95■■■■□ 3.18
Cwc22Q8C5N3 Junos-204ENSMUST00000128094 830 ntTSL 1 (best) BASIC34.94■■■■□ 3.18
Cwc22Q8C5N3 Crem-227ENSMUST00000149803 1422 ntTSL 1 (best) BASIC34.92■■■■□ 3.18
Cwc22Q8C5N3 Raly-201ENSMUST00000029120 1802 ntAPPRIS ALT2 TSL 5 BASIC34.92■■■■□ 3.18
Cwc22Q8C5N3 Rheb-201ENSMUST00000030787 1784 ntAPPRIS P1 TSL 1 (best) BASIC34.9■■■■□ 3.18
Cwc22Q8C5N3 Ssbp3-202ENSMUST00000072753 1924 ntTSL 1 (best) BASIC34.9■■■■□ 3.18
Cwc22Q8C5N3 Gm15672-201ENSMUST00000151512 1354 ntTSL 1 (best) BASIC34.89■■■■□ 3.18
Cwc22Q8C5N3 Kmt5a-202ENSMUST00000100709 1425 ntTSL 1 (best) BASIC34.89■■■■□ 3.18
Cwc22Q8C5N3 Smarcc1-203ENSMUST00000197480 1949 ntTSL 1 (best) BASIC34.88■■■■□ 3.17
Cwc22Q8C5N3 March2-205ENSMUST00000173015 1418 ntTSL 3 BASIC34.88■■■■□ 3.17
Cwc22Q8C5N3 Tbcel-204ENSMUST00000128959 1535 ntAPPRIS P1 TSL 5 BASIC34.86■■■■□ 3.17
Cwc22Q8C5N3 Rab40c-201ENSMUST00000026826 2466 ntAPPRIS P1 TSL 1 (best) BASIC34.83■■■■□ 3.17
Cwc22Q8C5N3 BC037032-205ENSMUST00000187080 508 ntTSL 5 BASIC34.81■■■■□ 3.16
Cwc22Q8C5N3 Rbm17-201ENSMUST00000040314 1599 ntAPPRIS P1 TSL 1 (best) BASIC34.81■■■■□ 3.16
Cwc22Q8C5N3 Rnf220-212ENSMUST00000221654 1949 ntTSL 1 (best) BASIC34.81■■■■□ 3.16
Cwc22Q8C5N3 Fkbp8-202ENSMUST00000119353 1720 ntAPPRIS ALT2 TSL 1 (best) BASIC34.81■■■■□ 3.16
Cwc22Q8C5N3 Ttc19-202ENSMUST00000101075 2193 ntAPPRIS ALT2 TSL 1 (best) BASIC34.8■■■■□ 3.16
Cwc22Q8C5N3 Ppp1r3e-202ENSMUST00000177403 1957 ntAPPRIS P1 TSL 5 BASIC34.8■■■■□ 3.16
Cwc22Q8C5N3 Gm9397-201ENSMUST00000200125 605 ntBASIC34.8■■■■□ 3.16
Cwc22Q8C5N3 Snx3-201ENSMUST00000019939 1401 ntAPPRIS P1 TSL 1 (best) BASIC34.8■■■■□ 3.16
Cwc22Q8C5N3 Zxda-201ENSMUST00000117281 2621 ntBASIC34.79■■■■□ 3.16
Cwc22Q8C5N3 A530058N18Rik-208ENSMUST00000131299 1387 ntTSL 2 BASIC34.79■■■■□ 3.16
Cwc22Q8C5N3 Popdc3-201ENSMUST00000019994 1853 ntAPPRIS P1 TSL 1 (best) BASIC34.78■■■■□ 3.16
Cwc22Q8C5N3 Srp9-201ENSMUST00000027792 1367 ntAPPRIS P1 TSL 1 (best) BASIC34.78■■■■□ 3.16
Cwc22Q8C5N3 A430072P03Rik-201ENSMUST00000161480 1510 ntTSL 1 (best) BASIC34.78■■■■□ 3.16
Cwc22Q8C5N3 Ryk-203ENSMUST00000175883 2505 ntAPPRIS P3 TSL 1 (best) BASIC34.77■■■■□ 3.16
Retrieved 100 of 76,532 protein–RNA pairs in 48.9 ms