Protein–RNA interactions for Protein: Q8C4J0

Ccdc60, Coiled-coil domain-containing protein 60, mousemouse

Predictions only

Length 545 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc60Q8C4J0 E330040D14Rik-201ENSMUST00000192299 1374 ntBASIC32.7■■■□□ 2.82
Ccdc60Q8C4J0 Akt1s1-202ENSMUST00000107880 1757 ntAPPRIS P3 TSL 1 (best) BASIC32.68■■■□□ 2.82
Ccdc60Q8C4J0 Noxo1-201ENSMUST00000019464 2238 ntAPPRIS P1 TSL 1 (best) BASIC32.68■■■□□ 2.82
Ccdc60Q8C4J0 Ring1-201ENSMUST00000025183 2034 ntAPPRIS P1 TSL 1 (best) BASIC32.68■■■□□ 2.82
Ccdc60Q8C4J0 Srsf9-201ENSMUST00000031513 1162 ntAPPRIS P1 TSL 1 (best) BASIC32.65■■■□□ 2.82
Ccdc60Q8C4J0 Gm45716-202ENSMUST00000134929 2031 ntAPPRIS P1 TSL 1 (best) BASIC32.63■■■□□ 2.81
Ccdc60Q8C4J0 C530008M17Rik-201ENSMUST00000086909 1844 ntBASIC32.63■■■□□ 2.81
Ccdc60Q8C4J0 Gnas-207ENSMUST00000109085 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC32.63■■■□□ 2.81
Ccdc60Q8C4J0 Slc16a6-203ENSMUST00000070872 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC32.61■■■□□ 2.81
Ccdc60Q8C4J0 Bok-205ENSMUST00000201863 883 ntAPPRIS P1 TSL 5 BASIC32.61■■■□□ 2.81
Ccdc60Q8C4J0 Ap1ar-210ENSMUST00000200409 2580 ntTSL 5 BASIC32.61■■■□□ 2.81
Ccdc60Q8C4J0 Fcnaos-201ENSMUST00000127642 1351 ntTSL 1 (best) BASIC32.6■■■□□ 2.81
Ccdc60Q8C4J0 Phlda1-201ENSMUST00000164773 1949 ntAPPRIS P1 TSL 1 (best) BASIC32.6■■■□□ 2.81
Ccdc60Q8C4J0 Fam60a-203ENSMUST00000111562 906 ntAPPRIS P1 TSL 3 BASIC32.6■■■□□ 2.81
Ccdc60Q8C4J0 Hoxa13-203ENSMUST00000147595 2395 ntAPPRIS P5 TSL 5 BASIC32.59■■■□□ 2.81
Ccdc60Q8C4J0 Dmwd-201ENSMUST00000032570 2494 ntAPPRIS P2 TSL 1 (best) BASIC32.57■■■□□ 2.8
Ccdc60Q8C4J0 Smad7-202ENSMUST00000168918 1882 ntAPPRIS P1 TSL 1 (best) BASIC32.57■■■□□ 2.8
Ccdc60Q8C4J0 AC153504.1-201ENSMUST00000218379 2290 ntBASIC32.56■■■□□ 2.8
Ccdc60Q8C4J0 Macrod2-205ENSMUST00000110063 845 ntTSL 5 BASIC32.56■■■□□ 2.8
Ccdc60Q8C4J0 Ywhah-201ENSMUST00000019109 1764 ntAPPRIS P1 TSL 1 (best) BASIC32.55■■■□□ 2.8
Ccdc60Q8C4J0 Zfp131-205ENSMUST00000223812 663 ntBASIC32.51■■■□□ 2.79
Ccdc60Q8C4J0 Ccdc122-202ENSMUST00000095625 1195 ntAPPRIS ALT2 TSL 1 (best) BASIC32.51■■■□□ 2.79
Ccdc60Q8C4J0 Tmeff1-202ENSMUST00000123476 1224 ntAPPRIS P1 TSL 1 (best) BASIC32.5■■■□□ 2.79
Ccdc60Q8C4J0 Gm30346-201ENSMUST00000218641 1699 ntBASIC32.5■■■□□ 2.79
Ccdc60Q8C4J0 Gm7334-201ENSMUST00000061681 1356 ntAPPRIS P1 BASIC32.49■■■□□ 2.79
Ccdc60Q8C4J0 Hoxa13-201ENSMUST00000047993 1309 ntAPPRIS ALT2 TSL 5 BASIC32.49■■■□□ 2.79
Ccdc60Q8C4J0 Gjc1-201ENSMUST00000068933 1903 ntAPPRIS P1 TSL 1 (best) BASIC32.47■■■□□ 2.79
Ccdc60Q8C4J0 Gm10762-201ENSMUST00000099385 1133 ntAPPRIS P1 BASIC32.47■■■□□ 2.79
Ccdc60Q8C4J0 Cds2-203ENSMUST00000110158 1247 ntTSL 1 (best) BASIC32.45■■■□□ 2.79
Ccdc60Q8C4J0 Ebag9-203ENSMUST00000227691 1945 ntAPPRIS P1 BASIC32.45■■■□□ 2.78
Ccdc60Q8C4J0 Aard-201ENSMUST00000090025 1348 ntAPPRIS P1 TSL 1 (best) BASIC32.45■■■□□ 2.78
Ccdc60Q8C4J0 Ywhaz-204ENSMUST00000110362 2122 ntAPPRIS P1 TSL 1 (best) BASIC32.44■■■□□ 2.78
Ccdc60Q8C4J0 Ric1-206ENSMUST00000162184 2157 ntTSL 1 (best) BASIC32.44■■■□□ 2.78
Ccdc60Q8C4J0 Gm5814-201ENSMUST00000177586 378 ntAPPRIS P1 BASIC32.44■■■□□ 2.78
Ccdc60Q8C4J0 CT030161.2-201ENSMUST00000218666 735 ntTSL 3 BASIC32.44■■■□□ 2.78
Ccdc60Q8C4J0 Apcdd1-202ENSMUST00000163716 1888 ntAPPRIS P1 TSL 1 (best) BASIC32.43■■■□□ 2.78
Ccdc60Q8C4J0 Tpst1-201ENSMUST00000040721 2050 ntAPPRIS P1 TSL 1 (best) BASIC32.41■■■□□ 2.78
Ccdc60Q8C4J0 Eif2ak3-204ENSMUST00000162950 927 ntTSL 1 (best) BASIC32.4■■■□□ 2.78
Ccdc60Q8C4J0 Eif4e2-203ENSMUST00000113230 1569 ntTSL 1 (best) BASIC32.4■■■□□ 2.78
Ccdc60Q8C4J0 Sowahd-201ENSMUST00000060057 1574 ntAPPRIS P1 BASIC32.4■■■□□ 2.78
Ccdc60Q8C4J0 Rab40c-201ENSMUST00000026826 2466 ntAPPRIS P1 TSL 1 (best) BASIC32.39■■■□□ 2.78
Ccdc60Q8C4J0 6530409C15Rik-202ENSMUST00000143551 1573 ntTSL 1 (best) BASIC32.39■■■□□ 2.78
Ccdc60Q8C4J0 Hmx1-201ENSMUST00000087674 1526 ntAPPRIS P1 TSL 1 (best) BASIC32.38■■■□□ 2.77
Ccdc60Q8C4J0 A530058N18Rik-207ENSMUST00000152254 1211 ntTSL 1 (best) BASIC32.37■■■□□ 2.77
Ccdc60Q8C4J0 Pard6a-205ENSMUST00000212430 1261 ntAPPRIS ALT1 TSL 1 (best) BASIC32.37■■■□□ 2.77
Ccdc60Q8C4J0 Mrps7-201ENSMUST00000058109 1962 ntAPPRIS P1 TSL 1 (best) BASIC32.36■■■□□ 2.77
Ccdc60Q8C4J0 Ywhaq-202ENSMUST00000103002 2110 ntAPPRIS P1 TSL 1 (best) BASIC32.35■■■□□ 2.77
Ccdc60Q8C4J0 Cebpb-201ENSMUST00000070642 1504 ntAPPRIS P1 BASIC32.34■■■□□ 2.77
Ccdc60Q8C4J0 Rnd2-201ENSMUST00000001347 1394 ntAPPRIS P1 TSL 1 (best) BASIC32.33■■■□□ 2.77
Ccdc60Q8C4J0 1700069B07Rik-202ENSMUST00000191155 939 ntBASIC32.32■■■□□ 2.76
Ccdc60Q8C4J0 Ryk-203ENSMUST00000175883 2505 ntAPPRIS P3 TSL 1 (best) BASIC32.31■■■□□ 2.76
Ccdc60Q8C4J0 Traf4-201ENSMUST00000017530 2078 ntAPPRIS P1 TSL 1 (best) BASIC32.31■■■□□ 2.76
Ccdc60Q8C4J0 Gltp-203ENSMUST00000112214 944 ntTSL 3 BASIC32.28■■■□□ 2.76
Ccdc60Q8C4J0 Macrod1-201ENSMUST00000040261 1274 ntAPPRIS P1 TSL 1 (best) BASIC32.28■■■□□ 2.76
Ccdc60Q8C4J0 Runx3-202ENSMUST00000119564 1855 ntAPPRIS ALT2 TSL 1 (best) BASIC32.27■■■□□ 2.76
Ccdc60Q8C4J0 Galnt10-202ENSMUST00000108846 1745 ntTSL 1 (best) BASIC32.25■■■□□ 2.75
Ccdc60Q8C4J0 Mfsd5-201ENSMUST00000051341 1742 ntAPPRIS P1 TSL 1 (best) BASIC32.24■■■□□ 2.75
Ccdc60Q8C4J0 Reps1-206ENSMUST00000154718 2402 ntTSL 5 BASIC32.24■■■□□ 2.75
Ccdc60Q8C4J0 Susd4-202ENSMUST00000153348 1898 ntAPPRIS P1 TSL 5 BASIC32.23■■■□□ 2.75
Ccdc60Q8C4J0 1700016A09Rik-201ENSMUST00000192004 835 ntBASIC32.23■■■□□ 2.75
Ccdc60Q8C4J0 Pitpna-205ENSMUST00000179445 1665 ntAPPRIS ALT1 TSL 5 BASIC32.22■■■□□ 2.75
Ccdc60Q8C4J0 Dazap1-203ENSMUST00000105362 2081 ntAPPRIS P3 TSL 1 (best) BASIC32.22■■■□□ 2.75
Ccdc60Q8C4J0 Tcte2-204ENSMUST00000130033 1462 ntAPPRIS ALT2 TSL 1 (best) BASIC32.2■■■□□ 2.75
Ccdc60Q8C4J0 Znrf3-202ENSMUST00000143746 1022 ntTSL 1 (best) BASIC32.18■■■□□ 2.74
Ccdc60Q8C4J0 Gm6345-201ENSMUST00000180378 1691 ntBASIC32.18■■■□□ 2.74
Ccdc60Q8C4J0 Dapk3-202ENSMUST00000178422 1730 ntAPPRIS P1 TSL 1 (best) BASIC32.17■■■□□ 2.74
Ccdc60Q8C4J0 Gm527-201ENSMUST00000058135 1468 ntAPPRIS P1 TSL 1 (best) BASIC32.17■■■□□ 2.74
Ccdc60Q8C4J0 Fbxo6-201ENSMUST00000030858 1346 ntAPPRIS P1 TSL 1 (best) BASIC32.17■■■□□ 2.74
Ccdc60Q8C4J0 Dedd-201ENSMUST00000064950 1618 ntAPPRIS P1 TSL 1 (best) BASIC32.15■■■□□ 2.74
Ccdc60Q8C4J0 Fam69b-201ENSMUST00000074240 1622 ntAPPRIS P1 TSL 1 (best) BASIC32.15■■■□□ 2.74
Ccdc60Q8C4J0 Triobp-206ENSMUST00000130663 1660 ntAPPRIS ALT2 TSL 5 BASIC32.13■■■□□ 2.73
Ccdc60Q8C4J0 Ssbp3-202ENSMUST00000072753 1924 ntTSL 1 (best) BASIC32.12■■■□□ 2.73
Ccdc60Q8C4J0 Raly-201ENSMUST00000029120 1802 ntAPPRIS ALT2 TSL 5 BASIC32.12■■■□□ 2.73
Ccdc60Q8C4J0 Smarcc1-203ENSMUST00000197480 1949 ntTSL 1 (best) BASIC32.11■■■□□ 2.73
Ccdc60Q8C4J0 Guf1-201ENSMUST00000031113 1769 ntTSL 1 (best) BASIC32.11■■■□□ 2.73
Ccdc60Q8C4J0 Crem-227ENSMUST00000149803 1422 ntTSL 1 (best) BASIC32.1■■■□□ 2.73
Ccdc60Q8C4J0 Junos-204ENSMUST00000128094 830 ntTSL 1 (best) BASIC32.1■■■□□ 2.73
Ccdc60Q8C4J0 Pradc1-202ENSMUST00000113770 610 ntTSL 1 (best) BASIC32.09■■■□□ 2.73
Ccdc60Q8C4J0 Pdia5-201ENSMUST00000023550 1808 ntAPPRIS P1 TSL 1 (best) BASIC32.09■■■□□ 2.73
Ccdc60Q8C4J0 Hrh3-208ENSMUST00000171736 906 ntTSL 5 BASIC32.08■■■□□ 2.73
Ccdc60Q8C4J0 Tdp2-203ENSMUST00000223804 1136 ntBASIC32.07■■■□□ 2.72
Ccdc60Q8C4J0 Rheb-201ENSMUST00000030787 1784 ntAPPRIS P1 TSL 1 (best) BASIC32.06■■■□□ 2.72
Ccdc60Q8C4J0 Ccdc9-202ENSMUST00000118976 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC32.05■■■□□ 2.72
Ccdc60Q8C4J0 Egr3-201ENSMUST00000035908 1509 ntAPPRIS ALT1 TSL 1 (best) BASIC32.05■■■□□ 2.72
Ccdc60Q8C4J0 Gm15672-201ENSMUST00000151512 1354 ntTSL 1 (best) BASIC32.04■■■□□ 2.72
Ccdc60Q8C4J0 Pfdn2-202ENSMUST00000135941 1735 ntAPPRIS P1 TSL 1 (best) BASIC32■■■□□ 2.71
Ccdc60Q8C4J0 Ppp1r3e-202ENSMUST00000177403 1957 ntAPPRIS P1 TSL 5 BASIC32■■■□□ 2.71
Ccdc60Q8C4J0 Zxda-201ENSMUST00000117281 2621 ntBASIC32■■■□□ 2.71
Ccdc60Q8C4J0 Rnf220-212ENSMUST00000221654 1949 ntTSL 1 (best) BASIC32■■■□□ 2.71
Ccdc60Q8C4J0 March2-205ENSMUST00000173015 1418 ntTSL 3 BASIC32■■■□□ 2.71
Ccdc60Q8C4J0 Fkbp8-202ENSMUST00000119353 1720 ntAPPRIS ALT2 TSL 1 (best) BASIC31.97■■■□□ 2.71
Ccdc60Q8C4J0 Ttc19-202ENSMUST00000101075 2193 ntAPPRIS ALT2 TSL 1 (best) BASIC31.97■■■□□ 2.71
Ccdc60Q8C4J0 Tbcel-204ENSMUST00000128959 1535 ntAPPRIS P1 TSL 5 BASIC31.95■■■□□ 2.71
Ccdc60Q8C4J0 Kmt5a-202ENSMUST00000100709 1425 ntTSL 1 (best) BASIC31.95■■■□□ 2.71
Ccdc60Q8C4J0 1190005I06Rik-201ENSMUST00000123927 844 ntAPPRIS P2 TSL 1 (best) BASIC31.95■■■□□ 2.71
Ccdc60Q8C4J0 BC037032-205ENSMUST00000187080 508 ntTSL 5 BASIC31.95■■■□□ 2.71
Ccdc60Q8C4J0 Gm9397-201ENSMUST00000200125 605 ntBASIC31.94■■■□□ 2.7
Ccdc60Q8C4J0 Rbms1-202ENSMUST00000112509 1806 ntTSL 1 (best) BASIC31.92■■■□□ 2.7
Ccdc60Q8C4J0 Capns1-201ENSMUST00000001845 1600 ntAPPRIS P2 TSL 5 BASIC31.92■■■□□ 2.7
Ccdc60Q8C4J0 Efemp2-201ENSMUST00000070118 1781 ntTSL 1 (best) BASIC31.91■■■□□ 2.7
Retrieved 100 of 76,532 protein–RNA pairs in 41.7 ms