Protein–RNA interactions for Protein: Q8C3Y4

Kntc1, Kinetochore-associated protein 1, mousemouse

Predictions only

Length 2,207 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Kntc1Q8C3Y4 A530058N18Rik-204ENSMUST00000141209 709 ntTSL 5 BASIC28.65■■■□□ 2.18
Kntc1Q8C3Y4 Znrf3-202ENSMUST00000143746 1022 ntTSL 1 (best) BASIC28.64■■■□□ 2.18
Kntc1Q8C3Y4 Bod1-202ENSMUST00000109415 799 ntAPPRIS P1 TSL 2 BASIC28.63■■■□□ 2.17
Kntc1Q8C3Y4 Gm527-201ENSMUST00000058135 1468 ntAPPRIS P1 TSL 1 (best) BASIC28.61■■■□□ 2.17
Kntc1Q8C3Y4 Gm28592-201ENSMUST00000186844 741 ntTSL 5 BASIC28.57■■■□□ 2.16
Kntc1Q8C3Y4 Hnrnpd-202ENSMUST00000072750 1537 ntAPPRIS ALT2 TSL 3 BASIC28.55■■■□□ 2.16
Kntc1Q8C3Y4 Gm43863-201ENSMUST00000203822 1192 ntBASIC28.55■■■□□ 2.16
Kntc1Q8C3Y4 Twist1-201ENSMUST00000049089 1628 ntAPPRIS P1 TSL 1 (best) BASIC28.54■■■□□ 2.16
Kntc1Q8C3Y4 Tbcel-204ENSMUST00000128959 1535 ntAPPRIS P1 TSL 5 BASIC28.51■■■□□ 2.15
Kntc1Q8C3Y4 Ubl4a-207ENSMUST00000178691 1038 ntAPPRIS P1 TSL 2 BASIC28.49■■■□□ 2.15
Kntc1Q8C3Y4 Pard6a-203ENSMUST00000211888 1179 ntTSL 1 (best) BASIC28.49■■■□□ 2.15
Kntc1Q8C3Y4 Tnfsf12-202ENSMUST00000181810 1435 ntAPPRIS P1 TSL 1 (best) BASIC28.48■■■□□ 2.15
Kntc1Q8C3Y4 AC157572.2-201ENSMUST00000226970 908 ntBASIC28.48■■■□□ 2.15
Kntc1Q8C3Y4 Ranbp1-202ENSMUST00000115645 1085 ntAPPRIS P1 TSL 1 (best) BASIC28.47■■■□□ 2.15
Kntc1Q8C3Y4 1700084E18Rik-202ENSMUST00000205624 729 ntBASIC28.47■■■□□ 2.15
Kntc1Q8C3Y4 Bok-205ENSMUST00000201863 883 ntAPPRIS P1 TSL 5 BASIC28.44■■■□□ 2.14
Kntc1Q8C3Y4 Stard10-203ENSMUST00000164479 1375 ntAPPRIS P1 TSL 1 (best) BASIC28.43■■■□□ 2.14
Kntc1Q8C3Y4 Il3ra-201ENSMUST00000090591 1614 ntAPPRIS P2 TSL 1 (best) BASIC28.42■■■□□ 2.14
Kntc1Q8C3Y4 Bok-201ENSMUST00000027499 1468 ntAPPRIS P1 TSL 1 (best) BASIC28.42■■■□□ 2.14
Kntc1Q8C3Y4 Gm31266-201ENSMUST00000192060 656 ntTSL 5 BASIC28.4■■■□□ 2.14
Kntc1Q8C3Y4 Srp9-201ENSMUST00000027792 1367 ntAPPRIS P1 TSL 1 (best) BASIC28.4■■■□□ 2.14
Kntc1Q8C3Y4 Cdv3-205ENSMUST00000189896 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC28.39■■■□□ 2.14
Kntc1Q8C3Y4 Stard3nl-201ENSMUST00000039694 1327 ntAPPRIS P1 TSL 1 (best) BASIC28.39■■■□□ 2.13
Kntc1Q8C3Y4 Fcho2-203ENSMUST00000109403 1523 ntTSL 5 BASIC28.39■■■□□ 2.13
Kntc1Q8C3Y4 Rab43-202ENSMUST00000032135 1262 ntTSL 1 (best) BASIC28.38■■■□□ 2.13
Kntc1Q8C3Y4 1700003F12Rik-202ENSMUST00000109709 704 ntAPPRIS ALT2 TSL 3 BASIC28.37■■■□□ 2.13
Kntc1Q8C3Y4 1700003F12Rik-201ENSMUST00000045116 704 ntAPPRIS P2 TSL 1 (best) BASIC28.37■■■□□ 2.13
Kntc1Q8C3Y4 Gm11529-201ENSMUST00000153012 639 ntTSL 1 (best) BASIC28.37■■■□□ 2.13
Kntc1Q8C3Y4 Gm7432-201ENSMUST00000210343 879 ntBASIC28.37■■■□□ 2.13
Kntc1Q8C3Y4 Gas1-202ENSMUST00000223933 1155 ntAPPRIS P2 BASIC28.37■■■□□ 2.13
Kntc1Q8C3Y4 6530409C15Rik-202ENSMUST00000143551 1573 ntTSL 1 (best) BASIC28.35■■■□□ 2.13
Kntc1Q8C3Y4 Tmbim4-204ENSMUST00000134797 486 ntTSL 1 (best) BASIC28.34■■■□□ 2.13
Kntc1Q8C3Y4 Gskip-202ENSMUST00000222284 1064 ntTSL 1 (best) BASIC28.3■■■□□ 2.12
Kntc1Q8C3Y4 Gkap1-201ENSMUST00000091579 1523 ntAPPRIS P1 TSL 1 (best) BASIC28.3■■■□□ 2.12
Kntc1Q8C3Y4 Lactb-202ENSMUST00000215172 1806 ntTSL 1 (best) BASIC28.28■■■□□ 2.12
Kntc1Q8C3Y4 1110065P20Rik-201ENSMUST00000106190 968 ntAPPRIS P1 TSL 2 BASIC28.27■■■□□ 2.12
Kntc1Q8C3Y4 Snrpe-202ENSMUST00000164574 597 ntTSL 3 BASIC28.27■■■□□ 2.12
Kntc1Q8C3Y4 Bckdhb-206ENSMUST00000190637 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC28.25■■■□□ 2.11
Kntc1Q8C3Y4 Asf1a-205ENSMUST00000219282 1150 ntTSL 5 BASIC28.25■■■□□ 2.11
Kntc1Q8C3Y4 Ccm2l-201ENSMUST00000109800 2158 ntAPPRIS P1 TSL 5 BASIC28.24■■■□□ 2.11
Kntc1Q8C3Y4 Glrx2-205ENSMUST00000145571 758 ntTSL 2 BASIC28.22■■■□□ 2.11
Kntc1Q8C3Y4 Dbp-204ENSMUST00000211513 1156 ntTSL 5 BASIC28.22■■■□□ 2.11
Kntc1Q8C3Y4 Ube2m-201ENSMUST00000005714 1472 ntAPPRIS P1 TSL 1 (best) BASIC28.21■■■□□ 2.11
Kntc1Q8C3Y4 Gfra4-203ENSMUST00000110234 600 ntTSL 1 (best) BASIC28.2■■■□□ 2.11
Kntc1Q8C3Y4 Gfra4-204ENSMUST00000110235 573 ntTSL 1 (best) BASIC28.2■■■□□ 2.11
Kntc1Q8C3Y4 Mtm1-204ENSMUST00000101501 770 ntTSL 1 (best) BASIC28.2■■■□□ 2.1
Kntc1Q8C3Y4 Gm20402-201ENSMUST00000174738 687 ntTSL 3 BASIC28.2■■■□□ 2.1
Kntc1Q8C3Y4 Pcbd2-201ENSMUST00000021958 544 ntTSL 1 (best) BASIC28.2■■■□□ 2.1
Kntc1Q8C3Y4 Cops6-202ENSMUST00000110951 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC28.18■■■□□ 2.1
Kntc1Q8C3Y4 Mir6538-201ENSMUST00000183713 110 ntBASIC28.18■■■□□ 2.1
Kntc1Q8C3Y4 Tnfsfm13-202ENSMUST00000174159 1470 ntAPPRIS ALT2 TSL 2 BASIC28.16■■■□□ 2.1
Kntc1Q8C3Y4 AC163623.1-201ENSMUST00000213738 727 ntAPPRIS P1 TSL 3 BASIC28.16■■■□□ 2.1
Kntc1Q8C3Y4 Cadm1-210ENSMUST00000214542 899 ntTSL 1 (best) BASIC28.16■■■□□ 2.1
Kntc1Q8C3Y4 Cacfd1-203ENSMUST00000114005 1286 ntTSL 1 (best) BASIC28.15■■■□□ 2.1
Kntc1Q8C3Y4 Eid2-201ENSMUST00000059596 1392 ntAPPRIS P1 BASIC28.15■■■□□ 2.1
Kntc1Q8C3Y4 Iscu-203ENSMUST00000112312 1116 ntTSL 5 BASIC28.14■■■□□ 2.1
Kntc1Q8C3Y4 1110008P14Rik-201ENSMUST00000048792 680 ntAPPRIS P1 TSL 1 (best) BASIC28.14■■■□□ 2.1
Kntc1Q8C3Y4 Dazap1-202ENSMUST00000105361 1537 ntAPPRIS ALT1 TSL 1 (best) BASIC28.14■■■□□ 2.09
Kntc1Q8C3Y4 E130304I02Rik-202ENSMUST00000187873 696 ntTSL 1 (best) BASIC28.14■■■□□ 2.09
Kntc1Q8C3Y4 Ssbp3-203ENSMUST00000097934 1742 ntAPPRIS ALT2 TSL 5 BASIC28.13■■■□□ 2.09
Kntc1Q8C3Y4 Gm11175-201ENSMUST00000116172 543 ntBASIC28.12■■■□□ 2.09
Kntc1Q8C3Y4 Phlda3-201ENSMUST00000038945 1435 ntAPPRIS P1 TSL 1 (best) BASIC28.12■■■□□ 2.09
Kntc1Q8C3Y4 Dleu2-206ENSMUST00000182537 318 ntTSL 2 BASIC28.11■■■□□ 2.09
Kntc1Q8C3Y4 Kmt5a-202ENSMUST00000100709 1425 ntTSL 1 (best) BASIC28.11■■■□□ 2.09
Kntc1Q8C3Y4 Hmgn3-202ENSMUST00000162246 983 ntAPPRIS P4 TSL 1 (best) BASIC28.1■■■□□ 2.09
Kntc1Q8C3Y4 Gm11599-201ENSMUST00000118720 878 ntBASIC28.1■■■□□ 2.09
Kntc1Q8C3Y4 Smarcad1-211ENSMUST00000204696 734 ntTSL 1 (best) BASIC28.09■■■□□ 2.09
Kntc1Q8C3Y4 Cadm4-201ENSMUST00000068023 2161 ntAPPRIS P1 TSL 1 (best) BASIC28.08■■■□□ 2.09
Kntc1Q8C3Y4 Ppp4c-211ENSMUST00000206570 1400 ntAPPRIS P1 TSL 1 (best) BASIC28.08■■■□□ 2.09
Kntc1Q8C3Y4 Bckdhb-201ENSMUST00000034801 1472 ntAPPRIS P3 TSL 1 (best) BASIC28.08■■■□□ 2.08
Kntc1Q8C3Y4 Atp1b3-201ENSMUST00000034983 1994 ntAPPRIS P1 TSL 1 (best) BASIC28.07■■■□□ 2.08
Kntc1Q8C3Y4 Gnai2-201ENSMUST00000055704 2215 ntAPPRIS P1 TSL 1 (best) BASIC28.06■■■□□ 2.08
Kntc1Q8C3Y4 Sntb1-202ENSMUST00000110200 1225 ntTSL 1 (best) BASIC28.06■■■□□ 2.08
Kntc1Q8C3Y4 4930577N17Rik-201ENSMUST00000139771 1625 ntBASIC28.06■■■□□ 2.08
Kntc1Q8C3Y4 Ppa2-201ENSMUST00000029644 1226 ntAPPRIS P3 TSL 1 (best) BASIC28.05■■■□□ 2.08
Kntc1Q8C3Y4 Dnajb2-202ENSMUST00000082158 1253 ntAPPRIS P1 TSL 5 BASIC28.05■■■□□ 2.08
Kntc1Q8C3Y4 Sept11-208ENSMUST00000202308 1792 ntAPPRIS ALT1 TSL 5 BASIC28.03■■■□□ 2.08
Kntc1Q8C3Y4 Nelfe-204ENSMUST00000173357 1399 ntAPPRIS P1 TSL 1 (best) BASIC28.02■■■□□ 2.08
Kntc1Q8C3Y4 Phlda1-201ENSMUST00000164773 1949 ntAPPRIS P1 TSL 1 (best) BASIC28.02■■■□□ 2.08
Kntc1Q8C3Y4 Crem-227ENSMUST00000149803 1422 ntTSL 1 (best) BASIC28.01■■■□□ 2.08
Kntc1Q8C3Y4 Gm26508-201ENSMUST00000181285 1516 ntTSL 5 BASIC28.01■■■□□ 2.07
Kntc1Q8C3Y4 Cap2-205ENSMUST00000225824 1634 ntBASIC28.01■■■□□ 2.07
Kntc1Q8C3Y4 Gm15672-201ENSMUST00000151512 1354 ntTSL 1 (best) BASIC28■■■□□ 2.07
Kntc1Q8C3Y4 Spata1-201ENSMUST00000029839 1920 ntAPPRIS P1 TSL 1 (best) BASIC27.99■■■□□ 2.07
Kntc1Q8C3Y4 Flt3l-211ENSMUST00000211429 1358 ntAPPRIS ALT2 TSL 1 (best) BASIC27.99■■■□□ 2.07
Kntc1Q8C3Y4 Nkain2-201ENSMUST00000092602 558 ntBASIC27.98■■■□□ 2.07
Kntc1Q8C3Y4 Bcl7b-202ENSMUST00000111187 564 ntTSL 1 (best) BASIC27.96■■■□□ 2.07
Kntc1Q8C3Y4 Rpsa-204ENSMUST00000217317 1599 ntAPPRIS P1 TSL 1 (best) BASIC27.96■■■□□ 2.07
Kntc1Q8C3Y4 Tcte2-204ENSMUST00000130033 1462 ntAPPRIS ALT2 TSL 1 (best) BASIC27.96■■■□□ 2.07
Kntc1Q8C3Y4 Rpl31-203ENSMUST00000179954 630 ntAPPRIS P1 TSL 1 (best) BASIC27.95■■■□□ 2.07
Kntc1Q8C3Y4 Rnf215-201ENSMUST00000003677 1874 ntAPPRIS P1 TSL 1 (best) BASIC27.95■■■□□ 2.06
Kntc1Q8C3Y4 Fbll1-201ENSMUST00000160726 1503 ntAPPRIS P1 BASIC27.95■■■□□ 2.06
Kntc1Q8C3Y4 Egln2-201ENSMUST00000080058 2107 ntAPPRIS P1 TSL 1 (best) BASIC27.94■■■□□ 2.06
Kntc1Q8C3Y4 Osbpl1a-209ENSMUST00000122175 1203 ntTSL 1 (best) BASIC27.92■■■□□ 2.06
Kntc1Q8C3Y4 Kcnip2-208ENSMUST00000161886 693 ntAPPRIS P3 TSL 1 (best) BASIC27.91■■■□□ 2.06
Kntc1Q8C3Y4 6330420H09Rik-201ENSMUST00000211371 1316 ntTSL 1 (best) BASIC27.91■■■□□ 2.06
Kntc1Q8C3Y4 A830010M20Rik-202ENSMUST00000094541 1134 ntTSL 5 BASIC27.9■■■□□ 2.06
Kntc1Q8C3Y4 Egr3-201ENSMUST00000035908 1509 ntAPPRIS ALT1 TSL 1 (best) BASIC27.89■■■□□ 2.06
Kntc1Q8C3Y4 Rexo2-210ENSMUST00000217037 609 ntTSL 3 BASIC27.87■■■□□ 2.05
Kntc1Q8C3Y4 Vegfb-202ENSMUST00000130048 1158 ntAPPRIS ALT2 TSL 1 (best) BASIC27.87■■■□□ 2.05
Retrieved 100 of 76,532 protein–RNA pairs in 32.2 ms