Protein–RNA interactions for Protein: Q8C190

Vps9d1, VPS9 domain-containing protein 1, mousemouse

Predictions only

Length 649 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps9d1Q8C190 Ildr2-205ENSMUST00000193860 2320 ntTSL 1 (best) BASIC23.42■■□□□ 1.34
Vps9d1Q8C190 Arl2bp-201ENSMUST00000034228 2063 ntAPPRIS P1 TSL 1 (best) BASIC23.4■■□□□ 1.34
Vps9d1Q8C190 Gnas-207ENSMUST00000109085 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC23.4■■□□□ 1.34
Vps9d1Q8C190 Gm12184-201ENSMUST00000104959 1310 ntAPPRIS P1 BASIC23.4■■□□□ 1.34
Vps9d1Q8C190 Abhd17a-201ENSMUST00000003436 1468 ntAPPRIS P1 TSL 1 (best) BASIC23.4■■□□□ 1.34
Vps9d1Q8C190 Kdm2a-203ENSMUST00000116571 2413 ntTSL 1 (best) BASIC23.4■■□□□ 1.34
Vps9d1Q8C190 Maz-202ENSMUST00000205461 796 ntTSL 5 BASIC23.39■■□□□ 1.33
Vps9d1Q8C190 Rtn2-201ENSMUST00000032559 1990 ntAPPRIS P3 TSL 1 (best) BASIC23.39■■□□□ 1.33
Vps9d1Q8C190 Popdc3-202ENSMUST00000161803 1369 ntTSL 1 (best) BASIC23.37■■□□□ 1.33
Vps9d1Q8C190 Ppp1r14c-202ENSMUST00000217573 2013 ntTSL 1 (best) BASIC23.37■■□□□ 1.33
Vps9d1Q8C190 Mef2a-201ENSMUST00000032776 2476 ntAPPRIS P1 TSL 1 (best) BASIC23.36■■□□□ 1.33
Vps9d1Q8C190 Gm24804-201ENSMUST00000174982 85 ntBASIC23.36■■□□□ 1.33
Vps9d1Q8C190 Dhrs13-203ENSMUST00000122342 1791 ntTSL 1 (best) BASIC23.35■■□□□ 1.33
Vps9d1Q8C190 Crlf1-201ENSMUST00000008032 1644 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
Vps9d1Q8C190 Gjc1-201ENSMUST00000068933 1903 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
Vps9d1Q8C190 Rnf130-202ENSMUST00000102776 1502 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.33
Vps9d1Q8C190 Vsig8-202ENSMUST00000177086 1519 ntTSL 1 (best) BASIC23.33■■□□□ 1.33
Vps9d1Q8C190 Reep6-203ENSMUST00000105355 2127 ntAPPRIS ALT2 TSL 1 (best) BASIC23.33■■□□□ 1.32
Vps9d1Q8C190 Reep6-204ENSMUST00000105357 2127 ntTSL 1 (best) BASIC23.33■■□□□ 1.32
Vps9d1Q8C190 Fbll1-201ENSMUST00000160726 1503 ntAPPRIS P1 BASIC23.32■■□□□ 1.32
Vps9d1Q8C190 Amer2-203ENSMUST00000225247 2662 ntBASIC23.31■■□□□ 1.32
Vps9d1Q8C190 Snf8-202ENSMUST00000107700 849 ntTSL 2 BASIC23.31■■□□□ 1.32
Vps9d1Q8C190 Ssx2ip-202ENSMUST00000106149 2416 ntAPPRIS ALT2 TSL 1 (best) BASIC23.3■■□□□ 1.32
Vps9d1Q8C190 Gm6345-201ENSMUST00000180378 1691 ntBASIC23.3■■□□□ 1.32
Vps9d1Q8C190 4921531C22Rik-201ENSMUST00000150145 1905 ntTSL 1 (best) BASIC23.29■■□□□ 1.32
Vps9d1Q8C190 Ssbp3-202ENSMUST00000072753 1924 ntTSL 1 (best) BASIC23.28■■□□□ 1.32
Vps9d1Q8C190 Clk2-203ENSMUST00000121931 2112 ntAPPRIS ALT1 TSL 5 BASIC23.28■■□□□ 1.32
Vps9d1Q8C190 Il17d-201ENSMUST00000089494 1274 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
Vps9d1Q8C190 Runx3-202ENSMUST00000119564 1855 ntAPPRIS ALT2 TSL 1 (best) BASIC23.28■■□□□ 1.32
Vps9d1Q8C190 Mpp6-203ENSMUST00000166318 2222 ntTSL 1 (best) BASIC23.27■■□□□ 1.31
Vps9d1Q8C190 Plekha3-201ENSMUST00000111920 2534 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
Vps9d1Q8C190 En1-201ENSMUST00000079721 2624 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
Vps9d1Q8C190 Sap30l-201ENSMUST00000020826 1151 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
Vps9d1Q8C190 Nrep-202ENSMUST00000168890 2185 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
Vps9d1Q8C190 Smarcc1-203ENSMUST00000197480 1949 ntTSL 1 (best) BASIC23.24■■□□□ 1.31
Vps9d1Q8C190 Ankrd28-201ENSMUST00000014640 6712 ntAPPRIS P2 TSL 1 (best) BASIC23.24■■□□□ 1.31
Vps9d1Q8C190 Lmo2-201ENSMUST00000111139 1434 ntTSL 5 BASIC23.24■■□□□ 1.31
Vps9d1Q8C190 Susd4-202ENSMUST00000153348 1898 ntAPPRIS P1 TSL 5 BASIC23.21■■□□□ 1.31
Vps9d1Q8C190 Cbln1-201ENSMUST00000034076 2800 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
Vps9d1Q8C190 Paip1-203ENSMUST00000126957 1731 ntTSL 5 BASIC23.2■■□□□ 1.3
Vps9d1Q8C190 Gkap1-201ENSMUST00000091579 1523 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
Vps9d1Q8C190 B4galt7-202ENSMUST00000100764 2195 ntTSL 1 (best) BASIC23.2■■□□□ 1.3
Vps9d1Q8C190 Htra4-201ENSMUST00000084031 2180 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
Vps9d1Q8C190 Sept11-208ENSMUST00000202308 1792 ntAPPRIS ALT1 TSL 5 BASIC23.19■■□□□ 1.3
Vps9d1Q8C190 Zfp91-201ENSMUST00000038627 5531 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
Vps9d1Q8C190 Hnrnpd-202ENSMUST00000072750 1537 ntAPPRIS ALT2 TSL 3 BASIC23.18■■□□□ 1.3
Vps9d1Q8C190 Guf1-201ENSMUST00000031113 1769 ntTSL 1 (best) BASIC23.17■■□□□ 1.3
Vps9d1Q8C190 Mfsd5-201ENSMUST00000051341 1742 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
Vps9d1Q8C190 Syt7-201ENSMUST00000073899 1605 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
Vps9d1Q8C190 Mypop-203ENSMUST00000131087 1951 ntAPPRIS P1 TSL 5 BASIC23.16■■□□□ 1.3
Vps9d1Q8C190 Hdgf-201ENSMUST00000005017 2245 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
Vps9d1Q8C190 Mkrn1-202ENSMUST00000051671 1511 ntTSL 1 (best) BASIC23.15■■□□□ 1.3
Vps9d1Q8C190 Rundc3a-204ENSMUST00000107105 1861 ntTSL 1 (best) BASIC23.15■■□□□ 1.3
Vps9d1Q8C190 Rnf130-201ENSMUST00000054684 1415 ntTSL 1 (best) BASIC23.15■■□□□ 1.3
Vps9d1Q8C190 Eif4e2-203ENSMUST00000113230 1569 ntTSL 1 (best) BASIC23.14■■□□□ 1.3
Vps9d1Q8C190 Cebpb-201ENSMUST00000070642 1504 ntAPPRIS P1 BASIC23.14■■□□□ 1.3
Vps9d1Q8C190 Zswim6-201ENSMUST00000105097 5456 ntTSL 5 BASIC23.14■■□□□ 1.29
Vps9d1Q8C190 Fam136a-201ENSMUST00000071492 1643 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.29
Vps9d1Q8C190 Akt1s1-202ENSMUST00000107880 1757 ntAPPRIS P3 TSL 1 (best) BASIC23.14■■□□□ 1.29
Vps9d1Q8C190 Dtnb-211ENSMUST00000173240 2218 ntTSL 5 BASIC23.12■■□□□ 1.29
Vps9d1Q8C190 Gm960-202ENSMUST00000177696 2262 ntAPPRIS P2 TSL 5 BASIC23.12■■□□□ 1.29
Vps9d1Q8C190 Arhgap22-201ENSMUST00000111955 2148 ntTSL 1 (best) BASIC23.11■■□□□ 1.29
Vps9d1Q8C190 Gsk3a-202ENSMUST00000108411 2248 ntAPPRIS ALT2 TSL 5 BASIC23.1■■□□□ 1.29
Vps9d1Q8C190 Cetn4-201ENSMUST00000071400 1808 ntTSL 5 BASIC23.1■■□□□ 1.29
Vps9d1Q8C190 Gnaq-201ENSMUST00000025541 5644 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
Vps9d1Q8C190 Dpf1-204ENSMUST00000108231 2040 ntTSL 5 BASIC23.09■■□□□ 1.29
Vps9d1Q8C190 Cldn10-203ENSMUST00000100314 2128 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
Vps9d1Q8C190 Efemp2-201ENSMUST00000070118 1781 ntTSL 1 (best) BASIC23.09■■□□□ 1.29
Vps9d1Q8C190 Mrps7-201ENSMUST00000058109 1962 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
Vps9d1Q8C190 Gm30346-201ENSMUST00000218641 1699 ntBASIC23.08■■□□□ 1.29
Vps9d1Q8C190 Irf2bp2-201ENSMUST00000054960 5080 ntAPPRIS P1 TSL 2 BASIC23.07■■□□□ 1.28
Vps9d1Q8C190 Clk2-201ENSMUST00000090927 2128 ntAPPRIS ALT1 TSL 1 (best) BASIC23.06■■□□□ 1.28
Vps9d1Q8C190 Lemd2-201ENSMUST00000055117 2595 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
Vps9d1Q8C190 Dapk3-202ENSMUST00000178422 1730 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
Vps9d1Q8C190 Foxc1-201ENSMUST00000062292 5844 ntAPPRIS P1 BASIC23.03■■□□□ 1.28
Vps9d1Q8C190 Fxyd1-205ENSMUST00000205439 535 ntAPPRIS P1 TSL 5 BASIC23.03■■□□□ 1.28
Vps9d1Q8C190 Homer3-202ENSMUST00000087467 880 ntTSL 1 (best) BASIC23.02■■□□□ 1.28
Vps9d1Q8C190 2410017I17Rik-202ENSMUST00000090537 2053 ntTSL 2 BASIC23.02■■□□□ 1.28
Vps9d1Q8C190 Gm17494-201ENSMUST00000072769 1800 ntTSL 1 (best) BASIC23.01■■□□□ 1.27
Vps9d1Q8C190 Klhl25-205ENSMUST00000206019 2299 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
Vps9d1Q8C190 Rab22a-202ENSMUST00000109110 849 ntTSL 5 BASIC23.01■■□□□ 1.27
Vps9d1Q8C190 Btf3-201ENSMUST00000022163 1091 ntTSL 1 (best) BASIC23.01■■□□□ 1.27
Vps9d1Q8C190 Tbx1-201ENSMUST00000009241 1777 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
Vps9d1Q8C190 Grb2-202ENSMUST00000106495 2041 ntTSL 5 BASIC23.01■■□□□ 1.27
Vps9d1Q8C190 Kcnmb4os2-201ENSMUST00000080943 1571 ntTSL 5 BASIC23.01■■□□□ 1.27
Vps9d1Q8C190 Mapk13-201ENSMUST00000004986 1392 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
Vps9d1Q8C190 Fam69b-201ENSMUST00000074240 1622 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
Vps9d1Q8C190 Ppp1cc-201ENSMUST00000086294 1442 ntTSL 1 (best) BASIC23■■□□□ 1.27
Vps9d1Q8C190 Ube2m-201ENSMUST00000005714 1472 ntAPPRIS P1 TSL 1 (best) BASIC22.99■■□□□ 1.27
Vps9d1Q8C190 Caap1-201ENSMUST00000030313 2107 ntAPPRIS P1 TSL 1 (best) BASIC22.99■■□□□ 1.27
Vps9d1Q8C190 Ndufaf6-201ENSMUST00000058183 1082 ntAPPRIS P1 TSL 1 (best) BASIC22.98■■□□□ 1.27
Vps9d1Q8C190 AI837181-202ENSMUST00000159759 1515 ntAPPRIS P1 TSL 1 (best) BASIC22.98■■□□□ 1.27
Vps9d1Q8C190 Irx4-201ENSMUST00000022095 2589 ntAPPRIS P1 TSL 1 (best) BASIC22.97■■□□□ 1.27
Vps9d1Q8C190 Fezf2-202ENSMUST00000224023 1917 ntBASIC22.97■■□□□ 1.27
Vps9d1Q8C190 Phf23-205ENSMUST00000135814 2214 ntTSL 1 (best) BASIC22.96■■□□□ 1.27
Vps9d1Q8C190 Rras2-201ENSMUST00000069449 2275 ntAPPRIS P1 TSL 1 (best) BASIC22.96■■□□□ 1.27
Vps9d1Q8C190 Terf2-201ENSMUST00000068388 1915 ntAPPRIS ALT2 TSL 1 (best) BASIC22.96■■□□□ 1.27
Vps9d1Q8C190 Suds3-202ENSMUST00000166397 1694 ntAPPRIS ALT2 TSL 1 (best) BASIC22.95■■□□□ 1.26
Vps9d1Q8C190 Pdia5-201ENSMUST00000023550 1808 ntAPPRIS P1 TSL 1 (best) BASIC22.94■■□□□ 1.26
Vps9d1Q8C190 Orai1-201ENSMUST00000051016 1482 ntAPPRIS P1 TSL 1 (best) BASIC22.94■■□□□ 1.26
Retrieved 100 of 76,532 protein–RNA pairs in 9.1 ms