Protein–RNA interactions for Protein: Q8BNA6

Fat3, Protocadherin Fat 3, mousemouse

Predictions only

Length 4,555 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Fat3Q8BNA6 Ubl4a-207ENSMUST00000178691 1038 ntAPPRIS P1 TSL 2 BASIC15.58■□□□□ 0.08
Fat3Q8BNA6 Atp1b3-201ENSMUST00000034983 1994 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Fat3Q8BNA6 Ranbp1-202ENSMUST00000115645 1085 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Fat3Q8BNA6 Hrh3-208ENSMUST00000171736 906 ntTSL 5 BASIC15.57■□□□□ 0.08
Fat3Q8BNA6 A830010M20Rik-202ENSMUST00000094541 1134 ntTSL 5 BASIC15.57■□□□□ 0.08
Fat3Q8BNA6 Fcho2-203ENSMUST00000109403 1523 ntTSL 5 BASIC15.56■□□□□ 0.08
Fat3Q8BNA6 Cdv3-205ENSMUST00000189896 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC15.56■□□□□ 0.08
Fat3Q8BNA6 Gm43863-201ENSMUST00000203822 1192 ntBASIC15.56■□□□□ 0.08
Fat3Q8BNA6 Gm31266-201ENSMUST00000192060 656 ntTSL 5 BASIC15.56■□□□□ 0.08
Fat3Q8BNA6 Znrf3-202ENSMUST00000143746 1022 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
Fat3Q8BNA6 Gm11529-201ENSMUST00000153012 639 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
Fat3Q8BNA6 Bok-205ENSMUST00000201863 883 ntAPPRIS P1 TSL 5 BASIC15.54■□□□□ 0.08
Fat3Q8BNA6 Dtnbp1-202ENSMUST00000110128 1305 ntAPPRIS ALT2 TSL 5 BASIC15.54■□□□□ 0.08
Fat3Q8BNA6 Kras-207ENSMUST00000203147 817 ntTSL 5 BASIC15.54■□□□□ 0.08
Fat3Q8BNA6 1700084E18Rik-202ENSMUST00000205624 729 ntBASIC15.54■□□□□ 0.08
Fat3Q8BNA6 Ccm2l-201ENSMUST00000109800 2158 ntAPPRIS P1 TSL 5 BASIC15.53■□□□□ 0.08
Fat3Q8BNA6 Gm11175-201ENSMUST00000116172 543 ntBASIC15.53■□□□□ 0.08
Fat3Q8BNA6 Bod1-202ENSMUST00000109415 799 ntAPPRIS P1 TSL 2 BASIC15.53■□□□□ 0.08
Fat3Q8BNA6 Gskip-202ENSMUST00000222284 1064 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
Fat3Q8BNA6 Snrpe-202ENSMUST00000164574 597 ntTSL 3 BASIC15.51■□□□□ 0.07
Fat3Q8BNA6 Rnd2-201ENSMUST00000001347 1394 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Fat3Q8BNA6 Tnfsf12-202ENSMUST00000181810 1435 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Fat3Q8BNA6 Lactb-202ENSMUST00000215172 1806 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
Fat3Q8BNA6 Dleu2-206ENSMUST00000182537 318 ntTSL 2 BASIC15.51■□□□□ 0.07
Fat3Q8BNA6 AC157572.2-201ENSMUST00000226970 908 ntBASIC15.48■□□□□ 0.07
Fat3Q8BNA6 Cadm4-201ENSMUST00000068023 2161 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Fat3Q8BNA6 Sept3-202ENSMUST00000116423 2467 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Fat3Q8BNA6 Asf1a-205ENSMUST00000219282 1150 ntTSL 5 BASIC15.48■□□□□ 0.07
Fat3Q8BNA6 6530409C15Rik-202ENSMUST00000143551 1573 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
Fat3Q8BNA6 Pard6a-203ENSMUST00000211888 1179 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
Fat3Q8BNA6 Rab43-202ENSMUST00000032135 1262 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
Fat3Q8BNA6 Gkap1-201ENSMUST00000091579 1523 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Fat3Q8BNA6 Bok-201ENSMUST00000027499 1468 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Fat3Q8BNA6 Gm15672-201ENSMUST00000151512 1354 ntTSL 1 (best) BASIC15.46■□□□□ 0.06
Fat3Q8BNA6 Zic2-201ENSMUST00000075888 2440 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Fat3Q8BNA6 Ube2m-201ENSMUST00000005714 1472 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Fat3Q8BNA6 Bckdhb-206ENSMUST00000190637 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC15.45■□□□□ 0.06
Fat3Q8BNA6 Il3ra-201ENSMUST00000090591 1614 ntAPPRIS P2 TSL 1 (best) BASIC15.45■□□□□ 0.06
Fat3Q8BNA6 Gm7432-201ENSMUST00000210343 879 ntBASIC15.44■□□□□ 0.06
Fat3Q8BNA6 Hnrnpd-202ENSMUST00000072750 1537 ntAPPRIS ALT2 TSL 3 BASIC15.44■□□□□ 0.06
Fat3Q8BNA6 A530058N18Rik-204ENSMUST00000141209 709 ntTSL 5 BASIC15.44■□□□□ 0.06
Fat3Q8BNA6 Srp9-201ENSMUST00000027792 1367 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Fat3Q8BNA6 Ppp4c-211ENSMUST00000206570 1400 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Fat3Q8BNA6 Gnai2-201ENSMUST00000055704 2215 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Fat3Q8BNA6 Pkdcc-204ENSMUST00000170794 2446 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Fat3Q8BNA6 Kmt5a-202ENSMUST00000100709 1425 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
Fat3Q8BNA6 Bckdhb-201ENSMUST00000034801 1472 ntAPPRIS P3 TSL 1 (best) BASIC15.42■□□□□ 0.06
Fat3Q8BNA6 Gm20402-201ENSMUST00000174738 687 ntTSL 3 BASIC15.42■□□□□ 0.06
Fat3Q8BNA6 Ssbp3-203ENSMUST00000097934 1742 ntAPPRIS ALT2 TSL 5 BASIC15.41■□□□□ 0.06
Fat3Q8BNA6 Eid2-201ENSMUST00000059596 1392 ntAPPRIS P1 BASIC15.41■□□□□ 0.06
Fat3Q8BNA6 Gas1-202ENSMUST00000223933 1155 ntAPPRIS P2 BASIC15.41■□□□□ 0.06
Fat3Q8BNA6 Stard10-203ENSMUST00000164479 1375 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Fat3Q8BNA6 Mir6538-201ENSMUST00000183713 110 ntBASIC15.4■□□□□ 0.06
Fat3Q8BNA6 Flt3l-211ENSMUST00000211429 1358 ntAPPRIS ALT2 TSL 1 (best) BASIC15.4■□□□□ 0.06
Fat3Q8BNA6 Spata1-201ENSMUST00000029839 1920 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Fat3Q8BNA6 Phlda3-201ENSMUST00000038945 1435 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Fat3Q8BNA6 Tnfsfm13-202ENSMUST00000174159 1470 ntAPPRIS ALT2 TSL 2 BASIC15.39■□□□□ 0.05
Fat3Q8BNA6 Phlda1-201ENSMUST00000164773 1949 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Fat3Q8BNA6 Mapk3-202ENSMUST00000057669 1800 ntAPPRIS P2 TSL 1 (best) BASIC15.37■□□□□ 0.05
Fat3Q8BNA6 Sntb1-202ENSMUST00000110200 1225 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
Fat3Q8BNA6 1700003F12Rik-202ENSMUST00000109709 704 ntAPPRIS ALT2 TSL 3 BASIC15.36■□□□□ 0.05
Fat3Q8BNA6 1700003F12Rik-201ENSMUST00000045116 704 ntAPPRIS P2 TSL 1 (best) BASIC15.36■□□□□ 0.05
Fat3Q8BNA6 Fndc10-201ENSMUST00000099265 2140 ntAPPRIS P1 BASIC15.35■□□□□ 0.05
Fat3Q8BNA6 Crem-227ENSMUST00000149803 1422 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
Fat3Q8BNA6 Stard3nl-201ENSMUST00000039694 1327 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Fat3Q8BNA6 Tmbim4-204ENSMUST00000134797 486 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
Fat3Q8BNA6 Dazap1-202ENSMUST00000105361 1537 ntAPPRIS ALT1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Fat3Q8BNA6 Gfra4-203ENSMUST00000110234 600 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
Fat3Q8BNA6 Gfra4-204ENSMUST00000110235 573 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
Fat3Q8BNA6 Calm3-201ENSMUST00000019514 2290 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Fat3Q8BNA6 Endog-201ENSMUST00000015481 1063 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Fat3Q8BNA6 Gm26508-201ENSMUST00000181285 1516 ntTSL 5 BASIC15.3■□□□□ 0.04
Fat3Q8BNA6 Pcbd2-201ENSMUST00000021958 544 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Fat3Q8BNA6 Gm12100-201ENSMUST00000150255 1933 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Fat3Q8BNA6 Rnf215-201ENSMUST00000003677 1874 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Fat3Q8BNA6 Egr3-201ENSMUST00000035908 1509 ntAPPRIS ALT1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Fat3Q8BNA6 Dnajb2-202ENSMUST00000082158 1253 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
Fat3Q8BNA6 Pard6a-201ENSMUST00000093195 1265 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
Fat3Q8BNA6 Cacfd1-203ENSMUST00000114005 1286 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Fat3Q8BNA6 Glrx2-205ENSMUST00000145571 758 ntTSL 2 BASIC15.27■□□□□ 0.04
Fat3Q8BNA6 Egln2-201ENSMUST00000080058 2107 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Fat3Q8BNA6 1110008P14Rik-201ENSMUST00000048792 680 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Fat3Q8BNA6 Nkain2-201ENSMUST00000092602 558 ntBASIC15.26■□□□□ 0.03
Fat3Q8BNA6 Sept11-208ENSMUST00000202308 1792 ntAPPRIS ALT1 TSL 5 BASIC15.26■□□□□ 0.03
Fat3Q8BNA6 Cadm1-210ENSMUST00000214542 899 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Fat3Q8BNA6 Emx1-201ENSMUST00000045942 1561 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Fat3Q8BNA6 Rpsa-204ENSMUST00000217317 1599 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Fat3Q8BNA6 Iscu-203ENSMUST00000112312 1116 ntTSL 5 BASIC15.24■□□□□ 0.03
Fat3Q8BNA6 Fbll1-201ENSMUST00000160726 1503 ntAPPRIS P1 BASIC15.23■□□□□ 0.03
Fat3Q8BNA6 Mtm1-204ENSMUST00000101501 770 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Fat3Q8BNA6 Gm11599-201ENSMUST00000118720 878 ntBASIC15.23■□□□□ 0.03
Fat3Q8BNA6 Igfbp7-201ENSMUST00000046746 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
Fat3Q8BNA6 AC163623.1-201ENSMUST00000213738 727 ntAPPRIS P1 TSL 3 BASIC15.22■□□□□ 0.03
Fat3Q8BNA6 Cap2-205ENSMUST00000225824 1634 ntBASIC15.22■□□□□ 0.03
Fat3Q8BNA6 1110065P20Rik-201ENSMUST00000106190 968 ntAPPRIS P1 TSL 2 BASIC15.22■□□□□ 0.03
Fat3Q8BNA6 Dbp-204ENSMUST00000211513 1156 ntTSL 5 BASIC15.22■□□□□ 0.03
Fat3Q8BNA6 Tprgl-201ENSMUST00000030896 1724 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Fat3Q8BNA6 Osbpl1a-209ENSMUST00000122175 1203 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Fat3Q8BNA6 Cops6-202ENSMUST00000110951 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
Fat3Q8BNA6 Tcte2-204ENSMUST00000130033 1462 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
Retrieved 100 of 76,532 protein–RNA pairs in 30.4 ms