Protein–RNA interactions for Protein: Q6ZWR6

Syne1, Nesprin-1, mousemouse

Predictions only

Length 8,799 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Syne1Q6ZWR6 Stk24-201ENSMUST00000079817 2676 ntAPPRIS P1 TSL 1 (best) BASIC8.76□□□□□ -1.01
Syne1Q6ZWR6 Mocs3-201ENSMUST00000099071 1973 ntAPPRIS P1 BASIC8.76□□□□□ -1.01
Syne1Q6ZWR6 Frs3-201ENSMUST00000113296 2144 ntAPPRIS P1 TSL 1 (best) BASIC8.74□□□□□ -1.01
Syne1Q6ZWR6 Vsig8-202ENSMUST00000177086 1519 ntTSL 1 (best) BASIC8.74□□□□□ -1.01
Syne1Q6ZWR6 C1qtnf5-201ENSMUST00000114815 1215 ntAPPRIS P1 TSL 1 (best) BASIC8.74□□□□□ -1.01
Syne1Q6ZWR6 Gm9939-201ENSMUST00000067161 1154 ntBASIC8.74□□□□□ -1.01
Syne1Q6ZWR6 Scx-201ENSMUST00000043089 1136 ntAPPRIS P1 TSL 1 (best) BASIC8.74□□□□□ -1.01
Syne1Q6ZWR6 Rnd2-201ENSMUST00000001347 1394 ntAPPRIS P1 TSL 1 (best) BASIC8.73□□□□□ -1.01
Syne1Q6ZWR6 Macrod1-201ENSMUST00000040261 1274 ntAPPRIS P1 TSL 1 (best) BASIC8.73□□□□□ -1.01
Syne1Q6ZWR6 Junos-204ENSMUST00000128094 830 ntTSL 1 (best) BASIC8.73□□□□□ -1.01
Syne1Q6ZWR6 Tprgl-201ENSMUST00000030896 1724 ntAPPRIS P1 TSL 1 (best) BASIC8.73□□□□□ -1.01
Syne1Q6ZWR6 E2f4-201ENSMUST00000015003 1993 ntAPPRIS P1 TSL 1 (best) BASIC8.72□□□□□ -1.01
Syne1Q6ZWR6 Tnfsf12-202ENSMUST00000181810 1435 ntAPPRIS P1 TSL 1 (best) BASIC8.72□□□□□ -1.01
Syne1Q6ZWR6 Hspd1-201ENSMUST00000027123 2423 ntAPPRIS P1 TSL 1 (best) BASIC8.72□□□□□ -1.01
Syne1Q6ZWR6 Ldb1-207ENSMUST00000156585 2014 ntTSL 1 (best) BASIC8.71□□□□□ -1.01
Syne1Q6ZWR6 Dlx4-201ENSMUST00000021241 2282 ntAPPRIS P1 TSL 1 (best) BASIC8.71□□□□□ -1.02
Syne1Q6ZWR6 Gm527-201ENSMUST00000058135 1468 ntAPPRIS P1 TSL 1 (best) BASIC8.71□□□□□ -1.02
Syne1Q6ZWR6 Tceal5-201ENSMUST00000066819 1044 ntAPPRIS P1 TSL 1 (best) BASIC8.71□□□□□ -1.02
Syne1Q6ZWR6 Spata1-201ENSMUST00000029839 1920 ntAPPRIS P1 TSL 1 (best) BASIC8.7□□□□□ -1.02
Syne1Q6ZWR6 Srp9-201ENSMUST00000027792 1367 ntAPPRIS P1 TSL 1 (best) BASIC8.7□□□□□ -1.02
Syne1Q6ZWR6 Gkap1-201ENSMUST00000091579 1523 ntAPPRIS P1 TSL 1 (best) BASIC8.69□□□□□ -1.02
Syne1Q6ZWR6 Tcte3-201ENSMUST00000040746 788 ntAPPRIS P1 TSL 1 (best) BASIC8.69□□□□□ -1.02
Syne1Q6ZWR6 Tcte3-202ENSMUST00000097398 632 ntTSL 1 (best) BASIC8.69□□□□□ -1.02
Syne1Q6ZWR6 E330040D14Rik-201ENSMUST00000192299 1374 ntBASIC8.69□□□□□ -1.02
Syne1Q6ZWR6 Tnfsfm13-202ENSMUST00000174159 1470 ntAPPRIS ALT2 TSL 2 BASIC8.68□□□□□ -1.02
Syne1Q6ZWR6 Uba52-205ENSMUST00000129909 705 ntAPPRIS P1 TSL 2 BASIC8.67□□□□□ -1.02
Syne1Q6ZWR6 Bok-205ENSMUST00000201863 883 ntAPPRIS P1 TSL 5 BASIC8.67□□□□□ -1.02
Syne1Q6ZWR6 Ppp2r2d-201ENSMUST00000041097 2081 ntAPPRIS P1 TSL 1 (best) BASIC8.67□□□□□ -1.02
Syne1Q6ZWR6 Tmem243-201ENSMUST00000115365 1040 ntAPPRIS P1 TSL 2 BASIC8.67□□□□□ -1.02
Syne1Q6ZWR6 Ranbp1-202ENSMUST00000115645 1085 ntAPPRIS P1 TSL 1 (best) BASIC8.67□□□□□ -1.02
Syne1Q6ZWR6 Rbfox2-201ENSMUST00000048145 1720 ntTSL 1 (best) BASIC8.67□□□□□ -1.02
Syne1Q6ZWR6 Bok-201ENSMUST00000027499 1468 ntAPPRIS P1 TSL 1 (best) BASIC8.67□□□□□ -1.02
Syne1Q6ZWR6 Ubl4a-207ENSMUST00000178691 1038 ntAPPRIS P1 TSL 2 BASIC8.67□□□□□ -1.02
Syne1Q6ZWR6 2310050C09Rik-201ENSMUST00000163439 1078 ntAPPRIS P1 TSL 2 BASIC8.67□□□□□ -1.02
Syne1Q6ZWR6 Hrh3-208ENSMUST00000171736 906 ntTSL 5 BASIC8.67□□□□□ -1.02
Syne1Q6ZWR6 Akt1s1-202ENSMUST00000107880 1757 ntAPPRIS P3 TSL 1 (best) BASIC8.66□□□□□ -1.02
Syne1Q6ZWR6 Reep6-203ENSMUST00000105355 2127 ntAPPRIS ALT2 TSL 1 (best) BASIC8.66□□□□□ -1.02
Syne1Q6ZWR6 Reep6-204ENSMUST00000105357 2127 ntTSL 1 (best) BASIC8.66□□□□□ -1.02
Syne1Q6ZWR6 Ube2m-201ENSMUST00000005714 1472 ntAPPRIS P1 TSL 1 (best) BASIC8.66□□□□□ -1.02
Syne1Q6ZWR6 4930542C12Rik-201ENSMUST00000171096 1203 ntBASIC8.66□□□□□ -1.02
Syne1Q6ZWR6 Tada2b-202ENSMUST00000119916 1321 ntTSL 5 BASIC8.65□□□□□ -1.02
Syne1Q6ZWR6 Pwwp2a-202ENSMUST00000094294 1814 ntTSL 5 BASIC8.65□□□□□ -1.02
Syne1Q6ZWR6 Gm6821-201ENSMUST00000107540 542 ntBASIC8.64□□□□□ -1.03
Syne1Q6ZWR6 Lmo2-201ENSMUST00000111139 1434 ntTSL 5 BASIC8.64□□□□□ -1.03
Syne1Q6ZWR6 Gm43863-201ENSMUST00000203822 1192 ntBASIC8.64□□□□□ -1.03
Syne1Q6ZWR6 Tbcel-204ENSMUST00000128959 1535 ntAPPRIS P1 TSL 5 BASIC8.64□□□□□ -1.03
Syne1Q6ZWR6 Dazap1-202ENSMUST00000105361 1537 ntAPPRIS ALT1 TSL 1 (best) BASIC8.64□□□□□ -1.03
Syne1Q6ZWR6 Phlda1-201ENSMUST00000164773 1949 ntAPPRIS P1 TSL 1 (best) BASIC8.63□□□□□ -1.03
Syne1Q6ZWR6 Bckdhb-206ENSMUST00000190637 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC8.63□□□□□ -1.03
Syne1Q6ZWR6 Bckdhb-201ENSMUST00000034801 1472 ntAPPRIS P3 TSL 1 (best) BASIC8.63□□□□□ -1.03
Syne1Q6ZWR6 Rpia-201ENSMUST00000066134 1829 ntAPPRIS P1 TSL 1 (best) BASIC8.63□□□□□ -1.03
Syne1Q6ZWR6 Stradb-202ENSMUST00000114296 1348 ntTSL 1 (best) BASIC8.63□□□□□ -1.03
Syne1Q6ZWR6 Gltp-201ENSMUST00000012028 1762 ntAPPRIS P1 TSL 1 (best) BASIC8.62□□□□□ -1.03
Syne1Q6ZWR6 Gm42809-201ENSMUST00000198429 1138 ntBASIC8.62□□□□□ -1.03
Syne1Q6ZWR6 Gm8503-201ENSMUST00000118131 455 ntBASIC8.62□□□□□ -1.03
Syne1Q6ZWR6 Cdv3-205ENSMUST00000189896 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC8.62□□□□□ -1.03
Syne1Q6ZWR6 Hspb1-202ENSMUST00000111155 930 ntTSL 1 (best) BASIC8.61□□□□□ -1.03
Syne1Q6ZWR6 Sept11-208ENSMUST00000202308 1792 ntAPPRIS ALT1 TSL 5 BASIC8.61□□□□□ -1.03
Syne1Q6ZWR6 Bod1-202ENSMUST00000109415 799 ntAPPRIS P1 TSL 2 BASIC8.61□□□□□ -1.03
Syne1Q6ZWR6 Dleu2-206ENSMUST00000182537 318 ntTSL 2 BASIC8.61□□□□□ -1.03
Syne1Q6ZWR6 Kras-207ENSMUST00000203147 817 ntTSL 5 BASIC8.6□□□□□ -1.03
Syne1Q6ZWR6 Pou4f1-201ENSMUST00000053016 4445 ntAPPRIS P1 TSL 1 (best) BASIC8.6□□□□□ -1.03
Syne1Q6ZWR6 Msantd2-201ENSMUST00000048604 2291 ntAPPRIS P1 TSL 1 (best) BASIC8.6□□□□□ -1.03
Syne1Q6ZWR6 Prelid3b-201ENSMUST00000016401 1553 ntAPPRIS P1 TSL 1 (best) BASIC8.6□□□□□ -1.03
Syne1Q6ZWR6 Fam136a-201ENSMUST00000071492 1643 ntAPPRIS P1 TSL 1 (best) BASIC8.6□□□□□ -1.03
Syne1Q6ZWR6 Tlx1-201ENSMUST00000026236 2065 ntAPPRIS P1 TSL 1 (best) BASIC8.6□□□□□ -1.03
Syne1Q6ZWR6 Ildr2-207ENSMUST00000195557 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC8.59□□□□□ -1.03
Syne1Q6ZWR6 Mon2-207ENSMUST00000219203 1844 ntTSL 1 (best) BASIC8.59□□□□□ -1.03
Syne1Q6ZWR6 Naa20-201ENSMUST00000002805 1172 ntTSL 1 (best) BASIC8.59□□□□□ -1.03
Syne1Q6ZWR6 Gm11529-201ENSMUST00000153012 639 ntTSL 1 (best) BASIC8.59□□□□□ -1.03
Syne1Q6ZWR6 AC157572.2-201ENSMUST00000226970 908 ntBASIC8.59□□□□□ -1.03
Syne1Q6ZWR6 Gm15672-201ENSMUST00000151512 1354 ntTSL 1 (best) BASIC8.59□□□□□ -1.03
Syne1Q6ZWR6 Orai1-202ENSMUST00000121652 1875 ntAPPRIS P1 TSL 1 (best) BASIC8.59□□□□□ -1.03
Syne1Q6ZWR6 Mapkapk5-201ENSMUST00000031410 2234 ntAPPRIS P2 TSL 1 (best) BASIC8.59□□□□□ -1.03
Syne1Q6ZWR6 Il3ra-201ENSMUST00000090591 1614 ntAPPRIS P2 TSL 1 (best) BASIC8.59□□□□□ -1.04
Syne1Q6ZWR6 Hnrnpd-202ENSMUST00000072750 1537 ntAPPRIS ALT2 TSL 3 BASIC8.58□□□□□ -1.04
Syne1Q6ZWR6 Gm2415-204ENSMUST00000190235 2004 ntBASIC8.58□□□□□ -1.04
Syne1Q6ZWR6 6530409C15Rik-202ENSMUST00000143551 1573 ntTSL 1 (best) BASIC8.58□□□□□ -1.04
Syne1Q6ZWR6 Crem-227ENSMUST00000149803 1422 ntTSL 1 (best) BASIC8.58□□□□□ -1.04
Syne1Q6ZWR6 Raly-203ENSMUST00000109701 1709 ntAPPRIS P3 TSL 1 (best) BASIC8.58□□□□□ -1.04
Syne1Q6ZWR6 Gm30346-201ENSMUST00000218641 1699 ntBASIC8.58□□□□□ -1.04
Syne1Q6ZWR6 1700084E18Rik-202ENSMUST00000205624 729 ntBASIC8.57□□□□□ -1.04
Syne1Q6ZWR6 Guk1-204ENSMUST00000170202 1078 ntAPPRIS P1 TSL 1 (best) BASIC8.57□□□□□ -1.04
Syne1Q6ZWR6 Eid2-201ENSMUST00000059596 1392 ntAPPRIS P1 BASIC8.56□□□□□ -1.04
Syne1Q6ZWR6 Gm31266-201ENSMUST00000192060 656 ntTSL 5 BASIC8.56□□□□□ -1.04
Syne1Q6ZWR6 Ywhaq-202ENSMUST00000103002 2110 ntAPPRIS P1 TSL 1 (best) BASIC8.56□□□□□ -1.04
Syne1Q6ZWR6 Kmt5a-202ENSMUST00000100709 1425 ntTSL 1 (best) BASIC8.56□□□□□ -1.04
Syne1Q6ZWR6 Ccz1-201ENSMUST00000031621 1769 ntAPPRIS P1 TSL 1 (best) BASIC8.56□□□□□ -1.04
Syne1Q6ZWR6 Hmx1-201ENSMUST00000087674 1526 ntAPPRIS P1 TSL 1 (best) BASIC8.56□□□□□ -1.04
Syne1Q6ZWR6 Anapc11-202ENSMUST00000093140 962 ntAPPRIS P1 TSL 1 (best) BASIC8.54□□□□□ -1.04
Syne1Q6ZWR6 Snrpe-202ENSMUST00000164574 597 ntTSL 3 BASIC8.54□□□□□ -1.04
Syne1Q6ZWR6 Pitpna-205ENSMUST00000179445 1665 ntAPPRIS ALT1 TSL 5 BASIC8.54□□□□□ -1.04
Syne1Q6ZWR6 Stard10-203ENSMUST00000164479 1375 ntAPPRIS P1 TSL 1 (best) BASIC8.53□□□□□ -1.04
Syne1Q6ZWR6 Triobp-206ENSMUST00000130663 1660 ntAPPRIS ALT2 TSL 5 BASIC8.53□□□□□ -1.04
Syne1Q6ZWR6 Suds3-202ENSMUST00000166397 1694 ntAPPRIS ALT2 TSL 1 (best) BASIC8.53□□□□□ -1.04
Syne1Q6ZWR6 Ppp4c-211ENSMUST00000206570 1400 ntAPPRIS P1 TSL 1 (best) BASIC8.53□□□□□ -1.04
Syne1Q6ZWR6 Znrf3-202ENSMUST00000143746 1022 ntTSL 1 (best) BASIC8.52□□□□□ -1.05
Syne1Q6ZWR6 4930577N17Rik-201ENSMUST00000139771 1625 ntBASIC8.52□□□□□ -1.05
Syne1Q6ZWR6 Ctbp1-206ENSMUST00000201575 2091 ntTSL 1 (best) BASIC8.52□□□□□ -1.05
Syne1Q6ZWR6 Gm7334-201ENSMUST00000061681 1356 ntAPPRIS P1 BASIC8.52□□□□□ -1.05
Retrieved 100 of 76,532 protein–RNA pairs in 8.4 ms