Protein–RNA interactions for Protein: Q64336

Tbr1, T-box brain protein 1, mousemouse

Predictions only

Length 681 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tbr1Q64336 Emx1-201ENSMUST00000045942 1561 ntAPPRIS P1 TSL 1 (best) BASIC23.55■■□□□ 1.36
Tbr1Q64336 Cadm4-201ENSMUST00000068023 2161 ntAPPRIS P1 TSL 1 (best) BASIC23.54■■□□□ 1.36
Tbr1Q64336 Twist1-201ENSMUST00000049089 1628 ntAPPRIS P1 TSL 1 (best) BASIC23.54■■□□□ 1.36
Tbr1Q64336 Tceal5-201ENSMUST00000066819 1044 ntAPPRIS P1 TSL 1 (best) BASIC23.53■■□□□ 1.36
Tbr1Q64336 Anapc11-202ENSMUST00000093140 962 ntAPPRIS P1 TSL 1 (best) BASIC23.53■■□□□ 1.36
Tbr1Q64336 6530409C15Rik-202ENSMUST00000143551 1573 ntTSL 1 (best) BASIC23.52■■□□□ 1.36
Tbr1Q64336 Gm43863-201ENSMUST00000203822 1192 ntBASIC23.52■■□□□ 1.36
Tbr1Q64336 Lmo2-201ENSMUST00000111139 1434 ntTSL 5 BASIC23.5■■□□□ 1.35
Tbr1Q64336 Znrf3-202ENSMUST00000143746 1022 ntTSL 1 (best) BASIC23.5■■□□□ 1.35
Tbr1Q64336 Dtnbp1-202ENSMUST00000110128 1305 ntAPPRIS ALT2 TSL 5 BASIC23.5■■□□□ 1.35
Tbr1Q64336 Tcte3-201ENSMUST00000040746 788 ntAPPRIS P1 TSL 1 (best) BASIC23.48■■□□□ 1.35
Tbr1Q64336 Tcte3-202ENSMUST00000097398 632 ntTSL 1 (best) BASIC23.48■■□□□ 1.35
Tbr1Q64336 Bok-205ENSMUST00000201863 883 ntAPPRIS P1 TSL 5 BASIC23.47■■□□□ 1.35
Tbr1Q64336 Tmem259-201ENSMUST00000052885 2225 ntAPPRIS P1 TSL 1 (best) BASIC23.46■■□□□ 1.35
Tbr1Q64336 Gkap1-201ENSMUST00000091579 1523 ntAPPRIS P1 TSL 1 (best) BASIC23.46■■□□□ 1.35
Tbr1Q64336 Uba52-205ENSMUST00000129909 705 ntAPPRIS P1 TSL 2 BASIC23.45■■□□□ 1.34
Tbr1Q64336 Cdv3-205ENSMUST00000189896 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC23.44■■□□□ 1.34
Tbr1Q64336 Egln2-201ENSMUST00000080058 2107 ntAPPRIS P1 TSL 1 (best) BASIC23.41■■□□□ 1.34
Tbr1Q64336 2310050C09Rik-201ENSMUST00000163439 1078 ntAPPRIS P1 TSL 2 BASIC23.41■■□□□ 1.34
Tbr1Q64336 Srp9-201ENSMUST00000027792 1367 ntAPPRIS P1 TSL 1 (best) BASIC23.4■■□□□ 1.34
Tbr1Q64336 Ssbp3-203ENSMUST00000097934 1742 ntAPPRIS ALT2 TSL 5 BASIC23.4■■□□□ 1.34
Tbr1Q64336 A530058N18Rik-204ENSMUST00000141209 709 ntTSL 5 BASIC23.4■■□□□ 1.34
Tbr1Q64336 Gnai2-201ENSMUST00000055704 2215 ntAPPRIS P1 TSL 1 (best) BASIC23.4■■□□□ 1.34
Tbr1Q64336 Tnfsfm13-202ENSMUST00000174159 1470 ntAPPRIS ALT2 TSL 2 BASIC23.38■■□□□ 1.33
Tbr1Q64336 Kras-207ENSMUST00000203147 817 ntTSL 5 BASIC23.38■■□□□ 1.33
Tbr1Q64336 Stard3nl-201ENSMUST00000039694 1327 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
Tbr1Q64336 Calm3-201ENSMUST00000019514 2290 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
Tbr1Q64336 Guk1-204ENSMUST00000170202 1078 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
Tbr1Q64336 Sept11-208ENSMUST00000202308 1792 ntAPPRIS ALT1 TSL 5 BASIC23.34■■□□□ 1.33
Tbr1Q64336 Sept3-202ENSMUST00000116423 2467 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
Tbr1Q64336 Gm31266-201ENSMUST00000192060 656 ntTSL 5 BASIC23.32■■□□□ 1.32
Tbr1Q64336 Tprgl-201ENSMUST00000030896 1724 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
Tbr1Q64336 Tada2b-202ENSMUST00000119916 1321 ntTSL 5 BASIC23.32■■□□□ 1.32
Tbr1Q64336 AC157572.2-201ENSMUST00000226970 908 ntBASIC23.31■■□□□ 1.32
Tbr1Q64336 Gm42809-201ENSMUST00000198429 1138 ntBASIC23.29■■□□□ 1.32
Tbr1Q64336 Il3ra-201ENSMUST00000090591 1614 ntAPPRIS P2 TSL 1 (best) BASIC23.29■■□□□ 1.32
Tbr1Q64336 Tbcel-204ENSMUST00000128959 1535 ntAPPRIS P1 TSL 5 BASIC23.28■■□□□ 1.32
Tbr1Q64336 Ube2m-201ENSMUST00000005714 1472 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
Tbr1Q64336 Gm11529-201ENSMUST00000153012 639 ntTSL 1 (best) BASIC23.25■■□□□ 1.31
Tbr1Q64336 Gm15672-201ENSMUST00000151512 1354 ntTSL 1 (best) BASIC23.25■■□□□ 1.31
Tbr1Q64336 Gm5814-201ENSMUST00000177586 378 ntAPPRIS P1 BASIC23.24■■□□□ 1.31
Tbr1Q64336 Bod1-202ENSMUST00000109415 799 ntAPPRIS P1 TSL 2 BASIC23.23■■□□□ 1.31
Tbr1Q64336 Hspb1-202ENSMUST00000111155 930 ntTSL 1 (best) BASIC23.23■■□□□ 1.31
Tbr1Q64336 Dleu2-206ENSMUST00000182537 318 ntTSL 2 BASIC23.23■■□□□ 1.31
Tbr1Q64336 Gskip-202ENSMUST00000222284 1064 ntTSL 1 (best) BASIC23.23■■□□□ 1.31
Tbr1Q64336 Stard10-203ENSMUST00000164479 1375 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
Tbr1Q64336 1700084E18Rik-202ENSMUST00000205624 729 ntBASIC23.22■■□□□ 1.31
Tbr1Q64336 Fndc10-201ENSMUST00000099265 2140 ntAPPRIS P1 BASIC23.22■■□□□ 1.31
Tbr1Q64336 Hnrnpd-202ENSMUST00000072750 1537 ntAPPRIS ALT2 TSL 3 BASIC23.22■■□□□ 1.31
Tbr1Q64336 Bckdhb-206ENSMUST00000190637 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC23.2■■□□□ 1.3
Tbr1Q64336 Eid2-201ENSMUST00000059596 1392 ntAPPRIS P1 BASIC23.2■■□□□ 1.3
Tbr1Q64336 Mocs3-201ENSMUST00000099071 1973 ntAPPRIS P1 BASIC23.19■■□□□ 1.3
Tbr1Q64336 Spata1-201ENSMUST00000029839 1920 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
Tbr1Q64336 Gm7334-201ENSMUST00000061681 1356 ntAPPRIS P1 BASIC23.18■■□□□ 1.3
Tbr1Q64336 Gfra4-203ENSMUST00000110234 600 ntTSL 1 (best) BASIC23.18■■□□□ 1.3
Tbr1Q64336 Gfra4-204ENSMUST00000110235 573 ntTSL 1 (best) BASIC23.18■■□□□ 1.3
Tbr1Q64336 Gm20402-201ENSMUST00000174738 687 ntTSL 3 BASIC23.18■■□□□ 1.3
Tbr1Q64336 Dazap1-202ENSMUST00000105361 1537 ntAPPRIS ALT1 TSL 1 (best) BASIC23.18■■□□□ 1.3
Tbr1Q64336 Tcte2-204ENSMUST00000130033 1462 ntAPPRIS ALT2 TSL 1 (best) BASIC23.17■■□□□ 1.3
Tbr1Q64336 Cops6-202ENSMUST00000110951 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC23.16■■□□□ 1.3
Tbr1Q64336 1700003F12Rik-202ENSMUST00000109709 704 ntAPPRIS ALT2 TSL 3 BASIC23.15■■□□□ 1.3
Tbr1Q64336 1700003F12Rik-201ENSMUST00000045116 704 ntAPPRIS P2 TSL 1 (best) BASIC23.15■■□□□ 1.3
Tbr1Q64336 Mapk3-202ENSMUST00000057669 1800 ntAPPRIS P2 TSL 1 (best) BASIC23.15■■□□□ 1.3
Tbr1Q64336 Prelid3b-201ENSMUST00000016401 1553 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.3
Tbr1Q64336 Glrx2-205ENSMUST00000145571 758 ntTSL 2 BASIC23.13■■□□□ 1.29
Tbr1Q64336 Nkain2-201ENSMUST00000092602 558 ntBASIC23.13■■□□□ 1.29
Tbr1Q64336 Phlda1-201ENSMUST00000164773 1949 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
Tbr1Q64336 Dnajb2-202ENSMUST00000082158 1253 ntAPPRIS P1 TSL 5 BASIC23.12■■□□□ 1.29
Tbr1Q64336 Crem-227ENSMUST00000149803 1422 ntTSL 1 (best) BASIC23.11■■□□□ 1.29
Tbr1Q64336 Egr3-201ENSMUST00000035908 1509 ntAPPRIS ALT1 TSL 1 (best) BASIC23.11■■□□□ 1.29
Tbr1Q64336 Foxd3-201ENSMUST00000087285 2324 ntAPPRIS P1 BASIC23.1■■□□□ 1.29
Tbr1Q64336 Gm7432-201ENSMUST00000210343 879 ntBASIC23.1■■□□□ 1.29
Tbr1Q64336 Rpia-201ENSMUST00000066134 1829 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
Tbr1Q64336 Ppp4c-211ENSMUST00000206570 1400 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.29
Tbr1Q64336 Phlda3-201ENSMUST00000038945 1435 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.29
Tbr1Q64336 Bckdhb-201ENSMUST00000034801 1472 ntAPPRIS P3 TSL 1 (best) BASIC23.08■■□□□ 1.29
Tbr1Q64336 Gm26508-201ENSMUST00000181285 1516 ntTSL 5 BASIC23.08■■□□□ 1.28
Tbr1Q64336 Fam136a-201ENSMUST00000071492 1643 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
Tbr1Q64336 Gm26699-201ENSMUST00000180825 2291 ntTSL 5 BASIC23.06■■□□□ 1.28
Tbr1Q64336 Nelfe-204ENSMUST00000173357 1399 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
Tbr1Q64336 4930577N17Rik-201ENSMUST00000139771 1625 ntBASIC23.04■■□□□ 1.28
Tbr1Q64336 Pwwp2a-202ENSMUST00000094294 1814 ntTSL 5 BASIC23.04■■□□□ 1.28
Tbr1Q64336 Gm28592-201ENSMUST00000186844 741 ntTSL 5 BASIC23.04■■□□□ 1.28
Tbr1Q64336 Paip1-203ENSMUST00000126957 1731 ntTSL 5 BASIC23.03■■□□□ 1.28
Tbr1Q64336 Cpsf4-201ENSMUST00000070487 1606 ntTSL 1 (best) BASIC23.02■■□□□ 1.28
Tbr1Q64336 Iscu-203ENSMUST00000112312 1116 ntTSL 5 BASIC23.02■■□□□ 1.28
Tbr1Q64336 Pcbd2-201ENSMUST00000021958 544 ntTSL 1 (best) BASIC23.02■■□□□ 1.28
Tbr1Q64336 Azin2-201ENSMUST00000030581 2063 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
Tbr1Q64336 A430072P03Rik-201ENSMUST00000161480 1510 ntTSL 1 (best) BASIC23.02■■□□□ 1.28
Tbr1Q64336 Rbfox2-201ENSMUST00000048145 1720 ntTSL 1 (best) BASIC23■■□□□ 1.27
Tbr1Q64336 Kmt5a-202ENSMUST00000100709 1425 ntTSL 1 (best) BASIC22.99■■□□□ 1.27
Tbr1Q64336 Frs3-201ENSMUST00000113296 2144 ntAPPRIS P1 TSL 1 (best) BASIC22.99■■□□□ 1.27
Tbr1Q64336 Endog-201ENSMUST00000015481 1063 ntAPPRIS P1 TSL 1 (best) BASIC22.98■■□□□ 1.27
Tbr1Q64336 Snrpe-202ENSMUST00000164574 597 ntTSL 3 BASIC22.98■■□□□ 1.27
Tbr1Q64336 Rpsa-204ENSMUST00000217317 1599 ntAPPRIS P1 TSL 1 (best) BASIC22.97■■□□□ 1.27
Tbr1Q64336 Pitpna-205ENSMUST00000179445 1665 ntAPPRIS ALT1 TSL 5 BASIC22.97■■□□□ 1.27
Tbr1Q64336 Tmbim4-204ENSMUST00000134797 486 ntTSL 1 (best) BASIC22.97■■□□□ 1.27
Tbr1Q64336 Hmgn3-202ENSMUST00000162246 983 ntAPPRIS P4 TSL 1 (best) BASIC22.97■■□□□ 1.27
Tbr1Q64336 Smarcad1-211ENSMUST00000204696 734 ntTSL 1 (best) BASIC22.97■■□□□ 1.27
Tbr1Q64336 AC163623.1-201ENSMUST00000213738 727 ntAPPRIS P1 TSL 3 BASIC22.97■■□□□ 1.27
Retrieved 100 of 76,532 protein–RNA pairs in 18.7 ms